CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011823_P002	Maize	plastid	82.44	85.19
Os01t0960200-00	Rice	nucleus	18.0	62.31
TraesCS3D01G509700.1	Wheat	plastid	54.74	55.22
TraesCS3B01G566500.1	Wheat	plastid	55.28	54.63
TraesCS3A01G503100.1	Wheat	cytosol	43.43	54.46
HORVU3Hr1G110830.5	Barley	cytosol, nucleus	39.76	53.09
VIT_07s0031g02650.t01	Wine grape	cytosol	14.44	37.96
GSMUA_Achr3P19020_001	Banana	cytosol	31.79	35.76
GSMUA_Achr9P08510_001	Banana	nucleus	29.2	34.65
PGSC0003DMT400045246	Potato	mitochondrion	9.48	33.72
KRH53256	Soybean	cytosol	30.39	33.49
VIT_18s0001g02480.t01	Wine grape	nucleus	28.12	33.46
KRH64648	Soybean	cytosol	30.17	33.45
EES19545	Sorghum	nucleus	31.36	32.26
CDY04672	Canola	nucleus	28.66	30.5
Bra015667.1-P	Field mustard	nucleus	27.37	30.42
CDY08177	Canola	nucleus	28.99	30.19
CDX88372	Canola	nucleus	26.72	30.02
Bra017947.1-P	Field mustard	nucleus	29.42	29.77
AT1G77500.1	Thale cress	nucleus	28.02	29.58
CDY41788	Canola	nucleus	26.94	29.34
AT1G21740.1	Thale cress	cytosol	29.09	28.33
Solyc06g060270.2.1	Tomato	nucleus	30.17	27.61
CDX87516	Canola	nucleus	12.39	25.56
OQU85656	Sorghum	cytosol	20.91	25.33
CDY18335	Canola	cytosol	19.07	25.04
EER97113	Sorghum	cytosol	19.4	24.86
CDY42454	Canola	cytosol	18.75	24.82
Bra002985.1-P	Field mustard	nucleus	19.29	24.72
AT5G54480.1	Thale cress	nucleus	18.64	24.03
KXG26898	Sorghum	cytosol	20.04	23.46
EER97130	Sorghum	nucleus	22.52	22.89
KXG31098	Sorghum	cytosol, plastid	13.69	21.93
EES08807	Sorghum	nucleus	16.59	21.42
EES06355	Sorghum	cytosol	13.69	20.72
KXG36086	Sorghum	nucleus	14.22	20.12
OQU88702	Sorghum	cytosol	9.16	19.27
OQU80872	Sorghum	nucleus	16.49	19.22
EER94480	Sorghum	nucleus	16.06	18.98
EES18173	Sorghum	nucleus	14.87	17.99
EES00973	Sorghum	nucleus	13.58	17.95
KXG39486	Sorghum	nucleus	15.3	17.11
KXG32552	Sorghum	nucleus	14.44	17.01

Protein Annotations

MapMan:35.1	EntrezGene:8077392	UniProt:A0A1B6Q8B1	ncoils:Coil	InterPro:DUF630	InterPro:DUF632
GO:GO:0003674	GO:GO:0003824	GO:GO:0004609	GO:GO:0005488	GO:GO:0005509	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0008654	GO:GO:0009058	GO:GO:0009987	EnsemblPlants:KXG34164
ProteinID:KXG34164	ProteinID:KXG34164.2	PFAM:PF04782	PFAM:PF04783	PANTHER:PTHR21450	PANTHER:PTHR21450:SF13
EnsemblPlantsGene:SORBI_3003G434200	UniParc:UPI0001A84C2C	RefSeq:XP_002456970.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:73579392..73582509

Molecular Weight (calculated)

101027.0 Da

IEP (calculated)

7.853

GRAVY (calculated)

-0.702

Length

928 amino acids

Sequence
(BLAST)

001: MGCTTSHDAF AAAVTSSSSR ARARRASASA SGGDPAALCR ERVALIRAAA DSRYALAAAH AAYFRSLVAV GDALRRFAAS ALAPATPGSS SPVLTLPPSP
101: AKPVATVSAS LPPSPSSSSS STVSPLSHSL SDDDLHLHDL DDTRHGGGVG GSEEASTSTS TRYHRHFMRR SSTVPTVVYE DPDAQTQYTT AGTSYGYAYG
201: DGDGHAYGDG YGYGYSYGSA YPYGPYGEVI AGETPEAAPR QPGPPPSPPT AEASPWEFLD PFAQYDQFME DYAGGNLPTN SPNCAELRRM EGIPELEDEA
301: ELERKAEKSK PLTSGVSDLN IKGKGPIQDN AASNGDFSGD SKLQKNATSK GDSPGGKLQR DATSISDSSG GKLQRKGSEP QPPPDGKLQR KGSEPAADPE
401: GEGGKPGSRN DSVPSNASSK SKEGGKNTVS LKGTVSSDID GSSTSGKKKG VAFEAEQSIR PAGGGGESHG KSIQSVVSSE PFSPLHHGTR DVREAIDEVK
501: KLFDDAANCS TDVSRLLEVG KMPPRDTPRV VRYISSRVID PLGLTVSTSS CLPKSHGMKS RASSSKASTS ASPGAGRSNG IGHLSSTLDK LWFWEKKLYQ
601: EIKDEEKLRM KYEKYYRRLK SMDERGAESS TIDSVRLSAR HLESKISINI STAKAFSLKI QQIRDEELYP QLVDLIQRFR RLWKAVLECH EKQLLAIQDS
701: RIHRLKAMTV SESGVEASRD LERELTKWYR CFNKWMSLQR SCAEALNEWL KKWLPEVPEE VTADGAPPFS PGRLGAPPVF IISNDWFQAI EMVSKNEMVS
801: KNDVLRAIDK FSNVVHEFKK SQEDEQRQKR KADHASKDYN RKCKDLEEEL GLSTMENPRY SHDNRVMDLE KLRKRRDEES TRHDKTLSHA HVAASTTLPI
901: GLVPVLQHIT SFFQRNQQVY MEIRIQGS

Best Arabidopsis Sequence Match ( AT1G21740.1 )
(BLAST)

001: MGCGGSKVDD QPLVILCRER KQLIKAASHH RCALAAAHLS YFQSLCDVGD SIKRFVDEEL VLVGTSSSSS PDSPVLTLPS DEGKPHKHKI SSSSTSVSHS
101: VIEDDDEGEG EDQHLHLSSG SELDSGSESG SDDSLGHIHI ETSPKVKEKE TRLPENYQPG YQSGYQSGYQ PGFTPGYQYQ PGYSAGYQYP VEGWGFMGEN
201: PNLNPYPNPN QNPGMYFMKK SVQPSRPVVF QPENHRVENG QWLPENGVGY SNYYPGNANT GYFGYPEQRR EPPSPVRPTP APPSPPRISS WDFLNVFDTY
301: DYNRAGGGES SGAGAGFFPA MGGGKSNSSS PDSREVRERE GIPELEEETE QEVIFGQTFK HMKRKGIEKV KEQHRQENEI HERKIKKRGD SGEGTSRAVP
401: VVERATESSF GSKTVSSFSS SEEESEFHHV NDGEGKSSSN DLGGHETVAT KSVGEVEEEY VRKKGVSFEL DENVTTSFDV ESSKISSLSA LSVHATRDLR
501: EVVKEIKSEF EVASSHGKEV AVLLEVSKLP YQQKSSGLKV IFSRIMYLVA PSTVSSRSQP QPSIRLTSRI LKIAKSYNGQ DVREGLTGNL SATLEQLYAW
601: EKKLYKEVKD EEKLRVVYEE KCRTLKKLDS LGAESSKIDT TRAAIRKLLT KLDVCIRSVD SISSRIHKLR DEELQPQLTQ LIHGLIRMWR SMLKCHQKQF
701: QAIMESKVRS LRANTGLQRD SGLKAILDLE MELREWCISF NDWVNTQKSY VESLNGWLSR CLHYEPESTE DGIAPFSPSR VGAPQVFVIC KDWQEAMARI
801: SGENVSNAMQ GFASSLHELW ERQDEEQRQR VKAEYVSHDF EKRLNDLRME RARVRMRNDQ LQDGASEKSV VLSESGISAL DDLKVDLDSM RKKLEEERAR
901: HKETIKLVNN AASSSLQAGL VPIFEALGNF TSQVVKAHED VRFQQQQQPE SED

Arabidopsis Description

DUF630 family protein, putative (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q9XI02]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.