Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028960_P001 | Maize | nucleus | 88.8 | 83.47 |
| TraesCS4A01G128000.1 | Wheat | cytosol | 71.33 | 72.64 |
| TraesCS4D01G178500.1 | Wheat | cytosol | 70.84 | 72.32 |
| TraesCS4B01G176800.1 | Wheat | cytosol | 70.72 | 72.2 |
| Os03t0321500-01 | Rice | plasma membrane | 72.53 | 71.41 |
| HORVU4Hr1G052040.1 | Barley | cytosol | 70.0 | 69.92 |
| GSMUA_Achr6P32100_001 | Banana | cytosol | 39.04 | 53.82 |
| GSMUA_Achr9P05210_001 | Banana | nucleus | 41.2 | 52.94 |
| VIT_06s0009g01600.t01 | Wine grape | nucleus | 26.99 | 47.56 |
| AT2G27090.2 | Thale cress | nucleus | 40.84 | 45.63 |
| KRG89850 | Soybean | nucleus | 42.05 | 44.52 |
| KRH73448 | Soybean | nucleus | 41.33 | 43.81 |
| KRH18693 | Soybean | nucleus | 42.41 | 43.73 |
| Bra012035.1-P | Field mustard | nucleus | 37.95 | 43.69 |
| CDY04477 | Canola | nucleus | 37.83 | 43.67 |
| KRH14687 | Soybean | nucleus | 41.08 | 43.55 |
| CDX71474 | Canola | nucleus | 36.14 | 41.72 |
| Solyc09g007100.2.1 | Tomato | nucleus | 38.31 | 41.62 |
| PGSC0003DMT400005111 | Potato | nucleus | 38.19 | 41.22 |
| VIT_06s0009g01610.t01 | Wine grape | nucleus | 18.92 | 41.21 |
| EES08807 | Sorghum | nucleus | 29.04 | 33.52 |
| EER97113 | Sorghum | cytosol | 20.48 | 23.48 |
| EES06355 | Sorghum | cytosol | 16.99 | 23.0 |
| OQU88702 | Sorghum | cytosol | 11.81 | 22.22 |
| OQU80872 | Sorghum | nucleus | 20.12 | 20.98 |
| KXG36086 | Sorghum | nucleus | 16.39 | 20.73 |
| EER94480 | Sorghum | nucleus | 18.19 | 19.24 |
| KXG31098 | Sorghum | cytosol, plastid | 13.13 | 18.83 |
| EES18173 | Sorghum | nucleus | 16.99 | 18.38 |
| EES00973 | Sorghum | nucleus | 15.42 | 18.23 |
| KXG32552 | Sorghum | nucleus | 17.23 | 18.15 |
| OQU85656 | Sorghum | cytosol | 15.9 | 17.23 |
| EES19545 | Sorghum | nucleus | 18.55 | 17.07 |
| KXG26898 | Sorghum | cytosol | 16.02 | 16.77 |
| EER97130 | Sorghum | nucleus | 18.43 | 16.76 |
| KXG34164 | Sorghum | plastid | 17.11 | 15.3 |
Protein Annotations
| EnsemblPlants:KXG39486 | EnsemblPlantsGene:SORBI_3001G389100 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0009506 |
| GO:GO:0016020 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 | PANTHER:PTHR21450:SF6 |
| PFAM:PF04782 | PFAM:PF04783 | ProteinID:KXG39486 | ProteinID:KXG39486.1 | SEG:seg | UniParc:UPI00081AE340 |
| UniProt:A0A1B6QNI6 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:67575830..67582176
Molecular Weight (calculated)
93403.8 Da
IEP (calculated)
5.810
GRAVY (calculated)
-0.711
Length
830 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRSKNEDD KALVLCQERK RFVREALDGR CAFAAAHFAY IQSLRHTGFA LRKFVEPEVP TDSSLFTSTS ATPEPPTIMQ KSTNLSPSLS HHASDSFSPV
101: PSPLSSGRFH VNHMKAGGNS VTTVKEKVLE PVTATLQTSS PVRGQAIHDL DDSSTFEAPP GTPPWDYFGL FQPVESQISF HDDKELGHDF ENDDDIRRLR
201: EKEGIPELEE ELEKSPAYPD YLKRHLGEEK PQDLKDVEKP PMNGGEDDLA LSEDDFDNPT SESLVRMFKN RNDMPVAHIA TGQSPAPLPT DDLASETVDS
301: QAERPKDDPA VDPQIERPKD NMAIDAQTEK TKDHTGVDSH AEKPKDDTRV LDISMYESDE TPVTSPLKEA STSTAAFPVN GKFKEPLRDV RNVARDLNSC
401: MKEIEILFIK ASDSGKEVPR MLEADKVNFR PLLPEEKAPG STASGFFATL FACCREEVPV PQPPPQAEVQ YLTWHRSMSS LSSSSRNPLG TTSKDDTDGL
501: TGNIFGGVYM NSGSHASTLD RLYAWERKLY DEVKAGSAVC RQYDEKCRQL RHQESRGESQ MSIDKTRAVV KDLHSRILVA IQRIDMISKN IEDLRDKELQ
601: PQLEELIGSL TRMWATMLEC HRHQHDIIKL VSNTGNMKAS IRSESQFQAT LLLQVELNTL CSNFQKWIAS HKAYLQSLNS WLLKCVKSLQ KKRKSSRKKK
701: VEADPITKYA VAPIFKTCES WINLLDHLPT DLEDAVKDLA AHINRYVPHQ EKQRGGSKRT LSLSRSGRSN REMGEVQRSD PPMDLQSSLE IFLGKLETFS
801: NISFEKYMEL KEDINEAKER YEKAQADQRI
101: PSPLSSGRFH VNHMKAGGNS VTTVKEKVLE PVTATLQTSS PVRGQAIHDL DDSSTFEAPP GTPPWDYFGL FQPVESQISF HDDKELGHDF ENDDDIRRLR
201: EKEGIPELEE ELEKSPAYPD YLKRHLGEEK PQDLKDVEKP PMNGGEDDLA LSEDDFDNPT SESLVRMFKN RNDMPVAHIA TGQSPAPLPT DDLASETVDS
301: QAERPKDDPA VDPQIERPKD NMAIDAQTEK TKDHTGVDSH AEKPKDDTRV LDISMYESDE TPVTSPLKEA STSTAAFPVN GKFKEPLRDV RNVARDLNSC
401: MKEIEILFIK ASDSGKEVPR MLEADKVNFR PLLPEEKAPG STASGFFATL FACCREEVPV PQPPPQAEVQ YLTWHRSMSS LSSSSRNPLG TTSKDDTDGL
501: TGNIFGGVYM NSGSHASTLD RLYAWERKLY DEVKAGSAVC RQYDEKCRQL RHQESRGESQ MSIDKTRAVV KDLHSRILVA IQRIDMISKN IEDLRDKELQ
601: PQLEELIGSL TRMWATMLEC HRHQHDIIKL VSNTGNMKAS IRSESQFQAT LLLQVELNTL CSNFQKWIAS HKAYLQSLNS WLLKCVKSLQ KKRKSSRKKK
701: VEADPITKYA VAPIFKTCES WINLLDHLPT DLEDAVKDLA AHINRYVPHQ EKQRGGSKRT LSLSRSGRSN REMGEVQRSD PPMDLQSSLE IFLGKLETFS
801: NISFEKYMEL KEDINEAKER YEKAQADQRI
001: MGASTSRIDE DKALQLCRER KKFVQQALDG RCLLAAAHVS YVQSLKSTGT ALRKFSETEV PVESSLYTST SATPEQPLAL IEKSVSHLSY SPPPASHSHH
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
Arabidopsis Description
At2g27090 [Source:UniProtKB/TrEMBL;Acc:Q9ZVD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.