CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048891_P002	Maize	nucleus	90.96	87.67
Os05t0255800-01	Rice	nucleus	53.96	82.2
Os05t0172300-01	Rice	nucleus	79.0	78.67
TraesCS4A01G376900.1	Wheat	nucleus	75.38	73.64
TraesCS7D01G074000.2	Wheat	nucleus	75.1	73.47
HORVU7Hr1G018230.3	Barley	nucleus	75.38	73.44
GSMUA_Achr2P22150_001	Banana	cytosol	46.87	57.12
GSMUA_Achr11P...	Banana	cytosol	45.62	49.25
Solyc04g054880.2.1	Tomato	nucleus	46.31	46.44
CDX69386	Canola	nucleus	38.66	46.03
PGSC0003DMT400053154	Potato	nucleus	45.9	45.96
VIT_00s1403g00010.t01	Wine grape	nucleus	47.15	45.94
CDY42005	Canola	nucleus	38.66	45.42
KRH43215	Soybean	nucleus	45.34	43.99
KRH59380	Soybean	nucleus	44.92	43.95
AT4G39790.1	Thale cress	plastid	40.06	43.84
KRG97595	Soybean	cytosol	39.64	43.12
Bra011832.1-P	Field mustard	nucleus	39.22	41.05
KXG39486	Sorghum	nucleus	33.52	29.04
EER97113	Sorghum	cytosol	23.5	23.34
EES06355	Sorghum	cytosol	18.08	21.21
OQU88702	Sorghum	cytosol	12.8	20.86
OQU80872	Sorghum	nucleus	23.09	20.85
KXG36086	Sorghum	nucleus	17.8	19.51
OQU85656	Sorghum	cytosol	20.31	19.06
KXG31098	Sorghum	cytosol, plastid	15.3	19.0
EES00973	Sorghum	nucleus	18.22	18.66
EES18173	Sorghum	nucleus	19.19	17.99
EER94480	Sorghum	nucleus	19.47	17.83
EER97130	Sorghum	nucleus	22.25	17.52
EES19545	Sorghum	nucleus	21.98	17.52
KXG32552	Sorghum	nucleus	19.05	17.39
KXG26898	Sorghum	cytosol	18.92	17.15
KXG34164	Sorghum	plastid	21.42	16.59

Protein Annotations

EnsemblPlants:EES08807	EnsemblPlantsGene:SORBI_3005G180900	InterPro:DUF630	InterPro:DUF632	ncoils:Coil	PANTHER:PTHR21450
PANTHER:PTHR21450:SF4	PFAM:PF04782	PFAM:PF04783	ProteinID:EES08807	ProteinID:EES08807.2	SEG:seg
UniParc:UPI00081AD8A3	UniProt:C5Y5X9	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:66373187..66377757

Molecular Weight (calculated)

80235.9 Da

IEP (calculated)

6.964

GRAVY (calculated)

-0.562

Length

719 amino acids

Sequence
(BLAST)

001: MGSSPSKATG EDALVLCKDR MRHIRQTIDS RDALSAAHLS YTQSLRTVGT ALRRYAESEI SPESSLSISE VDKSPSHSSM ASPSPSRAVE NLASPAHRAS
101: PLTTQPSTRI HCMKAAATAP LTFVIDPSAA EFVGHESPVS AFVPPPPPLP PELCTSWDFF DPIDAASSSS SNNENGVTLN FSRLKGLRES RVAEVVPLKE
201: GEEEIMSERK HTELPDDNAP SKQEREPKQG GTRKPSQLVD TSTKATSEQV AAKLEESEME KELCAEAEDP SEFITHRAKD FVSSMKDIET RFMRAAEAGN
301: EVSRMLETKK IRLDICAKMP GSPGKLPTAR FVSALRVCCN RDVILNQETA QHVSKVVTWK RSVSSLSSSS KSALMTSIIK DDVDDSNSDF VEEFAMVSGS
401: HSSTLDRLHA WERKLYDEIK ASENVRNAYD EKCNLLRRQF ARGLNAQLID KTRAVVKDLH SRVSVAIQAV DAISKRIEKI RDEELQPQLV ELIQGLIRMW
501: KLMLECHHKQ FITITLAYHV KNSTPVHQGE HRRQAAMHLC NEMDSFSSSF RNWVTAHKSY VEALNAWLQK CLLQPPQDRR RRKRKVSFPP RQAVSPPIFV
601: LCRDWLAMTE SLPADEVCKS LKDVMQLLRD SFEHQDEQNK PRSESQECGM LENNSEPEAA KSGSGSVASA EGLQSRLTAV LDRLTKFSEA SLKCYEELKQ
701: NYEMACDDYK RVGPNAPHA

Best Arabidopsis Sequence Match ( AT4G39790.1 )
(BLAST)

001: MGHSILEKMG CSNSKASMNK KNEPLHLCKE RKRFVKQAMD SRCALAAAHV SYIRSLRNIG ACLRQYAEAE TAHESSPSLT ATEPEKSPSH NSSYPDDSVD
101: SPLSHNSNPN PNPKPLFNLS YMKTETASST VTFTINPLSD GDDDLEVTMP AFSPPPPPRP RRPETSSWDY FDTCDDFDSF RFVGLSEQTE IDSECDAAVI
201: GLEKITSQGN VAKSGSETLQ DSSFKTKQRK QSCEDNDERE DPSEFITHRA KDFVSSMKDI EHKFFRASES GREVSRMLEV NKIRVGFADM TGKGNSIAFL
301: AALKRACCRG KSYSPVSQEP LSHQVTKVIV WKRTSSSRSS TSRNPLIQTS KEDHDDESGS DFIEEFCMIS GSHSSSLDRL YAWERKLYDE VKASEMIRKE
401: YDRKCEQLRN QFAKDHSAKS MDKTRAAAKD LHSRIRVAIQ SVESISKRIE RIRDDELHPQ LLEFLQGLIR MWKAMLECHH TQYITISLAY HCRHSSKTAH
501: ESVLKRRILA ELLEETECFG LSFVDLVHSM ASYVEALNGW LHNCVLLPQE RSTRNRRPWS PRRVLAPPIF VLCRDWSAGI KTLPSDELSG SIKGFSLDME
601: MLGEEKGGSL LVSDLSSVHS SLAKLLERLK KFSEASLKMY EDVKVKSEAA RVAYTNK

Arabidopsis Description

BZIP transcription factor, putative (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q5XV54]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.