CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006286_P001	Maize	nucleus	92.11	92.01
Zm00001d021452_P001	Maize	nucleus	91.13	88.42
Os09t0547300-01	Rice	nucleus	80.28	79.76
TraesCS5A01G347200.1	Wheat	nucleus	76.34	72.68
TraesCS5B01G348100.1	Wheat	nucleus	76.01	72.29
TraesCS5D01G353500.1	Wheat	nucleus	76.12	72.1
HORVU5Hr1G086500.2	Barley	nucleus	75.9	71.59
GSMUA_Achr3P14690_001	Banana	nucleus	43.7	56.68
GSMUA_Achr1P18120_001	Banana	cytosol	41.4	55.59
GSMUA_Achr7P04020_001	Banana	cytosol	39.1	51.0
PGSC0003DMT400043330	Potato	mitochondrion	36.8	41.64
CDX76322	Canola	cytosol	32.2	41.58
CDY17530	Canola	cytosol	32.2	41.41
OQU85656	Sorghum	cytosol	34.72	41.38
Solyc01g112050.2.1	Tomato	nucleus	39.98	41.01
VIT_03s0038g03260.t01	Wine grape	cytosol	36.36	40.89
Solyc10g074470.1.1	Tomato	cytosol	35.93	40.85
PGSC0003DMT400048013	Potato	nucleus	40.74	40.74
Bra020807.1-P	Field mustard	nucleus	33.95	40.63
Bra009665.1-P	Field mustard	cytosol	31.43	40.59
CDX69122	Canola	nucleus	33.19	40.35
CDX88008	Canola	nucleus	31.54	40.28
CDX75484	Canola	cytosol, plastid	30.67	40.17
KRH14028	Soybean	cytosol	31.65	39.43
AT2G17110.1	Thale cress	nucleus	31.54	39.29
CDY07877	Canola	cytosol	30.45	38.88
Bra011597.1-P	Field mustard	nucleus	35.49	38.76
KXG26898	Sorghum	cytosol	33.52	38.59
KRH74089	Soybean	cytosol	32.97	38.44
AT4G35240.1	Thale cress	nucleus	35.71	37.69
KRH60958	Soybean	cytosol	25.41	35.05
VIT_18s0001g00170.t01	Wine grape	cytosol	28.26	34.77
KRH51633	Soybean	cytosol	24.86	34.19
CDY31475	Canola	nucleus	20.37	30.9
AT1G20530.1	Thale cress	cytosol	19.93	29.64
EES19545	Sorghum	nucleus	25.96	26.27
EER97113	Sorghum	cytosol	19.61	24.72
EES06355	Sorghum	cytosol	15.33	22.84
KXG34164	Sorghum	plastid	22.89	22.52
KXG36086	Sorghum	nucleus	16.1	22.41
EES08807	Sorghum	nucleus	17.52	22.25
OQU80872	Sorghum	nucleus	18.73	21.48
OQU88702	Sorghum	cytosol	10.19	21.09
EES00973	Sorghum	nucleus	16.1	20.94
EES18173	Sorghum	nucleus	17.31	20.6
KXG32552	Sorghum	nucleus	16.1	18.65
KXG39486	Sorghum	nucleus	16.76	18.43
KXG31098	Sorghum	cytosol, plastid	11.61	18.31
EER94480	Sorghum	nucleus	14.9	17.32
Bra025823.1-P	Field mustard	peroxisome	21.36	16.99
CDY29526	Canola	peroxisome	21.14	16.8

Protein Annotations

EnsemblPlants:EER97130	EnsemblPlantsGene:SORBI_3002G286200	EntrezGene:8077213	InterPro:DUF630	InterPro:DUF632	ncoils:Coil
PANTHER:PTHR21450	PANTHER:PTHR21450:SF2	PFAM:PF04782	PFAM:PF04783	ProteinID:EER97130	ProteinID:EER97130.1
RefSeq:XP_002460609.1	SEG:seg	UniParc:UPI0001A83A07	UniProt:C5X722	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr2:+:66600496..66605935

Molecular Weight (calculated)

99636.6 Da

IEP (calculated)

5.111

GRAVY (calculated)

-0.660

Length

913 amino acids

Sequence
(BLAST)

001: MGCGQSKMEE EYAVRHCRER SELLALAIRQ RYMLADAHHA YAESLRSVGA LLHDFLRGVQ SLPPPPPEPA LRLPQQRKGD GLPAASPPPA IASSSSTAGA
101: PVAKQVRIAP DDGHIHFSDD DSDSEGGHIK FHDDEEPDPA RRRPEVVRSA GEPGPPPPEM GPPPYASGYA PPPYGPGYGY GYANGPGPGP GPGPDYGGIG
201: MNGGAGAYEP GYGVMGSGGG YGQSFGGGPG YADQGYGGMG SGGGAGGYDQ SYGGIGGYGQ SFFNINYARS QPPPPSVSHE HRLQATNARV HYYSGNGEQQ
301: PPPRGYGGGY YPPQSSSSYN QYAYGGYYGG GSAPAPPADI PSSSREPAAP PPPPSPPRVS TWDFLNPFET YESYYEQPTA TAAPYSPSRS SKDVREEEGI
401: PDLEDEDMEV VKEAYGDEKH PVKGYMGNGK AAKEEGRSST GDELPRKSKA SEASSSGSSL EHDVHVVEKS VVGEQVQHSE SRQHVAGLPP TGSEKIYIDD
501: AEVVVEIKTQ FDRASQSAGE VSKMLEVGKM PYYQKSSGFK VSMMVCGIPT MEEEFLRFEE DKAMGSGNLS STLQKLYMWE KKLLEEVKTE ERMRVLYDRK
601: REELKMLDEK GAEAHKLEAT ELYIRKLSTK ISIAIQVVNT ISEKISKLRD EELWPQTCEL IQGLMKMWSV MLECHQIQLH AISQAKNIDS MIDTAKFGEK
701: HMDLIKQLEL QLLDWIACFV AWVSAQKSYV KTLNQWLRNG VIYVPEETED GAPPFSPGRL GGPPIFVICN NWAASVDRIS EKEVVEAMQA FASNILNLWE
801: RHRSEQKQGL MANKGMDRDL RVMERDEQSM RKALEEQNKK LVLISNQGSV SLSAQVLHER GPGAEVGSLQ TSLRNIFEAM ENFTSASANT YKELHLRAEE
901: EKARVAQESG SVS

Best Arabidopsis Sequence Match ( AT4G35240.3 )
(BLAST)

001: MGCTSSKLDD LPAVALCRER CAFLEAAIHQ RYALAESHVA YTHSLREIGH SLHLFINHHH RFVASGGANV GDSPRLNLPP QRKGDLDDEA TNSPKKQKLA
101: SSHHNHNHAH SGSGSDSGHL EFDSDSDEDE EDDDDLDLDS LHHHSPPHHH LGNFPIPESA PMGGYMEQQP GYINPYPNPD MMGHPYSGGG SYMHMNYMKN
201: KSMPPSVVYE QRPTSPQRVY IGESSSSYPY PPQNSYFGYS NPVPGPGPGY YGSSSASTTA AATKPPPPPP SPPRSNGWDF LNPFDTYYPP YTPSRDSREL
301: REEEGIPDLE DDDSHYEVVK EVYGKPKFAA GGGHQPNPAA VHMMREESPS PPLDKSGAST SGGGDVGDAS AYQSRPSVSV EKEGMEYEVH VVEKKVVEDE
401: ERRSNATATR GGGGGGGPRA VPEVAKEIEN QFVKAAESGS EIAKLLEVGK HPYGRKHAAS KMLHGVTPSL PSTSGGTSSS AAAAVVPPTY ADIEEELASR
501: SRNLSSTLHK LHLWEKKLYH EVKAEEKLRL AHEKKLRKLK RLDQRGAEAI KVDKTRKLVR DMSTKIRIAI QVVDKISVTI NKIRDEDLWP QLNALIQGLT
601: RMWKTMLECH QSQCQAIREA QGLGPIRASK KLGDEHLEAT SLLGHELINW ILGFSSWVSA QKGYVKELNK WLMKCLLYEP EETPDGIVPF SPGRIGAPPI
701: FVICNQWSQA LDRISEKEVI EAMRSFTTSV LQLWEQDRLD TMMTGHGDSE KKVRNMDREE QRIQREIQAL EKKMILVAPG DGNSLSISGN VVYQSDTSSD
801: SLQGSLQRIF EAMERFTAES MRAYEDLLER TNEETAPREL EEEEEE

Arabidopsis Description

Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT4G35240]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.