Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G348100.1 | Wheat | nucleus | 93.8 | 94.58 |
| TraesCS5A01G347200.1 | Wheat | nucleus | 93.59 | 94.47 |
| TraesCS5D01G353500.1 | Wheat | nucleus | 93.8 | 94.19 |
| Os09t0547300-01 | Rice | nucleus | 72.52 | 76.39 |
| EER97130 | Sorghum | nucleus | 71.59 | 75.9 |
| Zm00001d006286_P001 | Maize | nucleus | 70.87 | 75.05 |
| Zm00001d021452_P001 | Maize | nucleus | 70.87 | 72.9 |
| HORVU7Hr1G057760.4 | Barley | cytosol | 39.77 | 58.78 |
| GSMUA_Achr3P14690_001 | Banana | nucleus | 39.57 | 54.4 |
| GSMUA_Achr1P18120_001 | Banana | cytosol | 37.71 | 53.68 |
| GSMUA_Achr7P04020_001 | Banana | cytosol | 35.85 | 49.57 |
| PGSC0003DMT400043330 | Potato | mitochondrion | 34.81 | 41.76 |
| CDY17530 | Canola | cytosol | 30.48 | 41.55 |
| Solyc10g074470.1.1 | Tomato | cytosol | 34.4 | 41.47 |
| Bra009665.1-P | Field mustard | cytosol | 30.27 | 41.44 |
| CDX76322 | Canola | cytosol | 30.27 | 41.44 |
| CDX88008 | Canola | nucleus | 30.27 | 40.98 |
| Bra020807.1-P | Field mustard | nucleus | 31.71 | 40.24 |
| Solyc01g112050.2.1 | Tomato | nucleus | 36.98 | 40.22 |
| VIT_03s0038g03260.t01 | Wine grape | cytosol | 33.57 | 40.02 |
| PGSC0003DMT400048013 | Potato | nucleus | 37.6 | 39.87 |
| HORVU2Hr1G096140.2 | Barley | cytosol | 15.39 | 39.84 |
| CDX75484 | Canola | cytosol, plastid | 28.62 | 39.74 |
| CDX69122 | Canola | nucleus | 30.68 | 39.55 |
| CDY07877 | Canola | cytosol | 29.03 | 39.3 |
| AT2G17110.1 | Thale cress | nucleus | 29.75 | 39.29 |
| KRH14028 | Soybean | cytosol | 29.65 | 39.15 |
| HORVU6Hr1G064670.13 | Barley | nucleus | 30.58 | 38.95 |
| KRH74089 | Soybean | cytosol | 31.2 | 38.57 |
| Bra011597.1-P | Field mustard | nucleus | 32.64 | 37.8 |
| AT4G35240.1 | Thale cress | nucleus | 33.37 | 37.34 |
| HORVU2Hr1G096180.1 | Barley | cytosol | 22.21 | 35.13 |
| VIT_18s0001g00170.t01 | Wine grape | cytosol | 26.24 | 34.23 |
| KRH60958 | Soybean | cytosol | 23.24 | 33.99 |
| KRH51633 | Soybean | cytosol | 22.83 | 33.28 |
| CDY31475 | Canola | nucleus | 18.91 | 30.4 |
| AT1G20530.1 | Thale cress | cytosol | 19.21 | 30.29 |
| HORVU5Hr1G084580.2 | Barley | cytosol | 19.01 | 25.24 |
| HORVU0Hr1G015650.2 | Barley | cytosol, nucleus | 10.74 | 23.53 |
| HORVU7Hr1G018230.3 | Barley | nucleus | 17.36 | 22.76 |
| HORVU3Hr1G110830.5 | Barley | cytosol, nucleus | 15.91 | 22.16 |
| HORVU3Hr1G050880.1 | Barley | nucleus | 15.81 | 21.98 |
| HORVU5Hr1G084030.15 | Barley | nucleus | 14.46 | 20.65 |
| HORVU5Hr1G058240.4 | Barley | nucleus | 15.08 | 20.59 |
| HORVU4Hr1G052040.1 | Barley | cytosol | 16.74 | 19.49 |
| HORVU6Hr1G062350.2 | Barley | plastid | 11.47 | 19.44 |
| HORVU7Hr1G052210.21 | Barley | cytosol | 15.5 | 17.84 |
| Bra025823.1-P | Field mustard | peroxisome | 19.32 | 16.29 |
| CDY29526 | Canola | peroxisome | 19.32 | 16.27 |
| HORVU3Hr1G042920.6 | Barley | cytosol, nucleus | 13.84 | 15.26 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G086500.2 | EnsemblPlantsGene:HORVU5Hr1G086500 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF2 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | UniParc:UPI000B486E05 | UniProt:A0A287S4C2 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:576341089..576346950
Molecular Weight (calculated)
105238.0 Da
IEP (calculated)
5.152
GRAVY (calculated)
-0.724
Length
968 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCGQSKLEE ELAVKHCRER SELLASAIRH RYALADAHRA YADSLARVGD ALHNFVRGVQ TLPPPPPEPT LHLPPGNRKG DGLPAASPAN NPGGRGGPAI
101: ASSSNGQAPP PVAKQVRINP DDEHIHFHSD GDSDSEDGHI KFHSDDEANP AQRRPEIVRS AGEPPGQRPP PQQMGQPQYG SSAYGPPPSY GAPPGYGYGY
201: PPPPDYGGMG GPGGYDPGYG GMGGAGGNGP GYSSMGPPPP SSDGYDPPGY GGIAGYGQSF FNYSRSQPPP PSVSHQHRPE ATDATVKTFF NISYARGQPP
301: PPSVSFEQRP EASDATVQTF FNTSYARGQP PPPSAGYEQR PQASDARVHY YGDGGAQPPP RGYNGYAAPP QSSYNQYAYG GYYGGAAAPP PADMPSTSRE
401: EAAPPPPPSP PRVSTWDFLN PFETYGSYYE QPAAAPTPYT PSRSSKDVRE EEGIPDLEDE DMEVVKEAYG DDKHPNGYTG KGKAAKEEGR SSTGDELPRD
501: SKSSVPSSSG SSLDHDVHVV EKSVVGEQVQ RTDARQHVAG LPPTGSEKTY VDDNEVVLEI KAQFERASSS AGEVSKMLEV GKMPYYQKSS GFKVSAMMIC
601: GIPTMEEEFL RFEEDKAMGC GNLSSTLQKL YMWERKLLQE VKAEEEERLK YDRKRQDLQI LDEKGAEAEK IIATEKEIRK LSTRISIAIQ VVNTISGKIS
701: KLRDDELWPQ TCELIQGLMR MWDVMLECHQ IQLHAISQAK NIDSMIDTAR FGEDHMTLIK SLELQLLDWT TCFAGWVAAQ KNYVSTLNEW LLKGVDYVPE
801: ETDDGVPPFS PGRLGAPPIF VICNNWAAGV ARISEKEVVK AMQAFASNVL HLWEKHRSQQ RQGMMANKGM DRGLRVMEKD EQAMRKALEA KNKKLVLVSD
901: QTGVSLSAQV LQGAGPQAEN SSLQSSLRNI FEAMETFTAA SANTYKDLNL RAEEEKARVA EESSGSVP
101: ASSSNGQAPP PVAKQVRINP DDEHIHFHSD GDSDSEDGHI KFHSDDEANP AQRRPEIVRS AGEPPGQRPP PQQMGQPQYG SSAYGPPPSY GAPPGYGYGY
201: PPPPDYGGMG GPGGYDPGYG GMGGAGGNGP GYSSMGPPPP SSDGYDPPGY GGIAGYGQSF FNYSRSQPPP PSVSHQHRPE ATDATVKTFF NISYARGQPP
301: PPSVSFEQRP EASDATVQTF FNTSYARGQP PPPSAGYEQR PQASDARVHY YGDGGAQPPP RGYNGYAAPP QSSYNQYAYG GYYGGAAAPP PADMPSTSRE
401: EAAPPPPPSP PRVSTWDFLN PFETYGSYYE QPAAAPTPYT PSRSSKDVRE EEGIPDLEDE DMEVVKEAYG DDKHPNGYTG KGKAAKEEGR SSTGDELPRD
501: SKSSVPSSSG SSLDHDVHVV EKSVVGEQVQ RTDARQHVAG LPPTGSEKTY VDDNEVVLEI KAQFERASSS AGEVSKMLEV GKMPYYQKSS GFKVSAMMIC
601: GIPTMEEEFL RFEEDKAMGC GNLSSTLQKL YMWERKLLQE VKAEEEERLK YDRKRQDLQI LDEKGAEAEK IIATEKEIRK LSTRISIAIQ VVNTISGKIS
701: KLRDDELWPQ TCELIQGLMR MWDVMLECHQ IQLHAISQAK NIDSMIDTAR FGEDHMTLIK SLELQLLDWT TCFAGWVAAQ KNYVSTLNEW LLKGVDYVPE
801: ETDDGVPPFS PGRLGAPPIF VICNNWAAGV ARISEKEVVK AMQAFASNVL HLWEKHRSQQ RQGMMANKGM DRGLRVMEKD EQAMRKALEA KNKKLVLVSD
901: QTGVSLSAQV LQGAGPQAEN SSLQSSLRNI FEAMETFTAA SANTYKDLNL RAEEEKARVA EESSGSVP
001: MGCTSSKLDD LPAVALCRER CAFLEAAIHQ RYALAESHVA YTHSLREIGH SLHLFINHHH RFVASGGANV GDSPRLNLPP QRKGDLDDEA TNSPKKQKLA
101: SSHHNHNHAH SGSGSDSGHL EFDSDSDEDE EDDDDLDLDS LHHHSPPHHH LGNFPIPESA PMGGYMEQQP GYINPYPNPD MMGHPYSGGG SYMHMNYMKN
201: KSMPPSVVYE QRPTSPQRVY IGESSSSYPY PPQNSYFGYS NPVPGPGPGY YGSSSASTTA AATKPPPPPP SPPRSNGWDF LNPFDTYYPP YTPSRDSREL
301: REEEGIPDLE DDDSHYEVVK EVYGKPKFAA GGGHQPNPAA VHMMREESPS PPLDKSGAST SGGGDVGDAS AYQSRPSVSV EKEGMEYEVH VVEKKVVEDE
401: ERRSNATATR GGGGGGGPRA VPEVAKEIEN QFVKAAESGS EIAKLLEVGK HPYGRKHAAS KMLHGVTPSL PSTSGGTSSS AAAAVVPPTY ADIEEELASR
501: SRNLSSTLHK LHLWEKKLYH EVKAEEKLRL AHEKKLRKLK RLDQRGAEAI KVDKTRKLVR DMSTKIRIAI QVVDKISVTI NKIRDEDLWP QLNALIQGLT
601: RMWKTMLECH QSQCQAIREA QGLGPIRASK KLGDEHLEAT SLLGHELINW ILGFSSWVSA QKGYVKELNK WLMKCLLYEP EETPDGIVPF SPGRIGAPPI
701: FVICNQWSQA LDRISEKEVI EAMRSFTTSV LQLWEQDRLD TMMTGHGDSE KKVRNMDREE QRIQREIQAL EKKMILVAPG DGNSLSISGN VVYQSDTSSD
801: SLQGSLQRIF EAMERFTAES MRAYEDLLER TNEETAPREL EEEEEE
101: SSHHNHNHAH SGSGSDSGHL EFDSDSDEDE EDDDDLDLDS LHHHSPPHHH LGNFPIPESA PMGGYMEQQP GYINPYPNPD MMGHPYSGGG SYMHMNYMKN
201: KSMPPSVVYE QRPTSPQRVY IGESSSSYPY PPQNSYFGYS NPVPGPGPGY YGSSSASTTA AATKPPPPPP SPPRSNGWDF LNPFDTYYPP YTPSRDSREL
301: REEEGIPDLE DDDSHYEVVK EVYGKPKFAA GGGHQPNPAA VHMMREESPS PPLDKSGAST SGGGDVGDAS AYQSRPSVSV EKEGMEYEVH VVEKKVVEDE
401: ERRSNATATR GGGGGGGPRA VPEVAKEIEN QFVKAAESGS EIAKLLEVGK HPYGRKHAAS KMLHGVTPSL PSTSGGTSSS AAAAVVPPTY ADIEEELASR
501: SRNLSSTLHK LHLWEKKLYH EVKAEEKLRL AHEKKLRKLK RLDQRGAEAI KVDKTRKLVR DMSTKIRIAI QVVDKISVTI NKIRDEDLWP QLNALIQGLT
601: RMWKTMLECH QSQCQAIREA QGLGPIRASK KLGDEHLEAT SLLGHELINW ILGFSSWVSA QKGYVKELNK WLMKCLLYEP EETPDGIVPF SPGRIGAPPI
701: FVICNQWSQA LDRISEKEVI EAMRSFTTSV LQLWEQDRLD TMMTGHGDSE KKVRNMDREE QRIQREIQAL EKKMILVAPG DGNSLSISGN VVYQSDTSSD
801: SLQGSLQRIF EAMERFTAES MRAYEDLLER TNEETAPREL EEEEEE
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT4G35240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.