Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400048013 | Potato | nucleus | 96.29 | 93.87 |
| Solyc10g074470.1.1 | Tomato | cytosol | 66.52 | 73.72 |
| VIT_03s0038g03260.t01 | Wine grape | cytosol | 55.06 | 60.34 |
| KRH14028 | Soybean | cytosol | 46.29 | 56.21 |
| KRH74089 | Soybean | cytosol | 49.1 | 55.81 |
| CDY17530 | Canola | cytosol | 44.04 | 55.21 |
| AT2G17110.1 | Thale cress | nucleus | 44.72 | 54.3 |
| CDX76322 | Canola | cytosol | 42.92 | 54.03 |
| Bra009665.1-P | Field mustard | cytosol | 42.25 | 53.18 |
| CDX88008 | Canola | nucleus | 42.7 | 53.15 |
| CDX75484 | Canola | cytosol, plastid | 41.57 | 53.08 |
| CDX69122 | Canola | nucleus | 44.72 | 53.0 |
| CDY07877 | Canola | cytosol | 42.47 | 52.87 |
| Bra020807.1-P | Field mustard | nucleus | 44.49 | 51.9 |
| Bra011597.1-P | Field mustard | nucleus | 47.87 | 50.96 |
| AT4G35240.1 | Thale cress | nucleus | 48.54 | 49.94 |
| GSMUA_Achr1P18120_001 | Banana | cytosol | 34.61 | 45.29 |
| GSMUA_Achr3P14690_001 | Banana | nucleus | 35.62 | 45.03 |
| GSMUA_Achr11P... | Banana | mitochondrion | 33.6 | 44.49 |
| Os02t0669900-01 | Rice | cytosol | 21.24 | 44.26 |
| HORVU2Hr1G096140.2 | Barley | cytosol | 17.42 | 41.44 |
| GSMUA_Achr7P04020_001 | Banana | cytosol | 32.47 | 41.29 |
| Os04t0562800-00 | Rice | cytosol, mitochondrion | 25.06 | 40.69 |
| EER97130 | Sorghum | nucleus | 41.01 | 39.98 |
| Os09t0547300-01 | Rice | nucleus | 41.24 | 39.93 |
| Zm00001d006286_P001 | Maize | nucleus | 40.22 | 39.17 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, nucleus | 28.99 | 39.15 |
| Zm00001d021452_P001 | Maize | nucleus | 41.01 | 38.79 |
| HORVU7Hr1G057760.4 | Barley | cytosol | 28.09 | 38.17 |
| Zm00001d017553_P001 | Maize | cytosol | 32.13 | 37.98 |
| OQU85656 | Sorghum | cytosol | 32.47 | 37.73 |
| TraesCS5B01G348100.1 | Wheat | nucleus | 40.34 | 37.4 |
| Os08t0551200-00 | Rice | cytosol | 33.93 | 37.28 |
| TraesCS5A01G347200.1 | Wheat | nucleus | 40.11 | 37.23 |
| TraesCS5D01G353500.1 | Wheat | nucleus | 40.11 | 37.03 |
| HORVU5Hr1G086500.2 | Barley | nucleus | 40.22 | 36.98 |
| KXG26898 | Sorghum | cytosol | 32.92 | 36.95 |
| HORVU6Hr1G064670.13 | Barley | nucleus | 31.35 | 36.71 |
| TraesCS6B01G271800.1 | Wheat | nucleus | 31.24 | 36.48 |
| TraesCS6D01G235200.1 | Wheat | nucleus | 31.24 | 36.44 |
| Zm00001d002669_P002 | Maize | cytosol | 32.25 | 36.38 |
| TraesCS6A01G253600.1 | Wheat | nucleus | 31.12 | 36.3 |
| TraesCS7D01G273600.1 | Wheat | cytosol | 32.92 | 36.17 |
| TraesCS2B01G423500.1 | Wheat | cytosol | 30.9 | 35.9 |
| TraesCS7B01G171500.1 | Wheat | cytosol | 32.02 | 35.71 |
| TraesCS2D01G402400.1 | Wheat | cytosol | 30.45 | 35.7 |
| Zm00001d026130_P001 | Maize | nucleus | 31.57 | 35.61 |
| TraesCS2A01G405700.1 | Wheat | cytosol | 30.34 | 35.48 |
| HORVU2Hr1G096180.1 | Barley | cytosol | 24.16 | 35.13 |
| TraesCS7A01G273600.1 | Wheat | cytosol, mitochondrion, nucleus | 32.36 | 30.7 |
| Solyc06g060270.2.1 | Tomato | nucleus | 32.47 | 28.5 |
| Solyc07g047830.2.1 | Tomato | nucleus | 23.26 | 27.13 |
| Solyc01g111740.2.1 | Tomato | cytosol | 21.35 | 26.06 |
| Solyc04g054880.2.1 | Tomato | nucleus | 20.9 | 25.94 |
| Solyc03g120140.2.1 | Tomato | cytosol | 8.31 | 25.78 |
| Solyc02g083610.2.1 | Tomato | nucleus | 16.63 | 23.23 |
| Solyc09g007100.2.1 | Tomato | nucleus | 19.21 | 22.38 |
| Solyc08g068100.2.1 | Tomato | cytosol | 17.53 | 21.52 |
| Solyc01g090270.2.1 | Tomato | nucleus | 16.74 | 17.01 |
Protein Annotations
| EnsemblPlants:Solyc01g112050.2.1 | EnsemblPlantsGene:Solyc01g112050.2 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF2 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | UniParc:UPI0002767ABF | UniProt:K4B466 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:98164303..98170898
Molecular Weight (calculated)
98793.4 Da
IEP (calculated)
6.453
GRAVY (calculated)
-0.686
Length
890 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCATSKHDD LPAVALCRER CAFLDQAIHH RYAFAEAHLA YLHSLKSVGA SLHRFFQNDL DLSTSSSGSP LSPILPHPKD ETSSALPHPV KKIHHSHSSS
101: GSHLHFHSES DEDDDSGSDS LHHHTETPTH GQFTYGDHQN LGFGAPPYQV GGVGGFGPPY QVAGAGGFGP PYQVAGTGGF GQPYQVGGGF GAPYQVGGGG
201: GFGAPYQVGG GGLGAPYQDG GGGSGGFMHM NYMRKQTTPS VTYHQRPISP ETVRMGEASS SYYPYPYPNS SNPNSYNYPN YPNYAGEFFS SSIQRPYGDS
301: SPPAPSGAGP SSAPSTSKPP PPPPSPPRSS PWDFLNPFET FESNNYPTPY TPSRDSREVR EEEGIPDLED EDFEHEVVKE VHGHQKFVEG ESEVHGGNHS
401: KAVAEEEREK QSDSESLYHG RPSASMENEQ VEFEVHVVDK KVVDEEGKSG HGGNVAGFKA RAFKDDSDVV KEIQVQFEQA SESGNELAKM LEVGKLPHNR
501: KNATYQVSSK MLHAISPSLS VVSSQPSTSN NAAIQINDPA ALDVEGDVSS RYKNLSSTLN KLYLWEKKLY QEVKSEEKIR VLHERKSEKL KRLDQKGAEA
601: HKVDMTRQLV RSLSTKIRIA IQVVDKISEK INKMRDEELW PQLNVLIQGL SKMWKGMLEC HRNQCQAIGE AKRLDAIASH KHLSDAHLEA TLQLEHELLN
701: WTLRFSCWVN AQKGYVRALN TWLMKCLLYV PEETADGRVP FSPGRIGAPP IFVICNQWSQ TIEGVSEKEV IDCMRDFASN VLQLWERDKH EMRQRMMVHK
801: DMERKVKNLE REDQKIQKGI HALDKRIVLI SGDETGLSLN RHVVYQSDTS KNSSLQVGLR HIFEAMERFT AKSLKVYEEL LQRIEEDDLA
101: GSHLHFHSES DEDDDSGSDS LHHHTETPTH GQFTYGDHQN LGFGAPPYQV GGVGGFGPPY QVAGAGGFGP PYQVAGTGGF GQPYQVGGGF GAPYQVGGGG
201: GFGAPYQVGG GGLGAPYQDG GGGSGGFMHM NYMRKQTTPS VTYHQRPISP ETVRMGEASS SYYPYPYPNS SNPNSYNYPN YPNYAGEFFS SSIQRPYGDS
301: SPPAPSGAGP SSAPSTSKPP PPPPSPPRSS PWDFLNPFET FESNNYPTPY TPSRDSREVR EEEGIPDLED EDFEHEVVKE VHGHQKFVEG ESEVHGGNHS
401: KAVAEEEREK QSDSESLYHG RPSASMENEQ VEFEVHVVDK KVVDEEGKSG HGGNVAGFKA RAFKDDSDVV KEIQVQFEQA SESGNELAKM LEVGKLPHNR
501: KNATYQVSSK MLHAISPSLS VVSSQPSTSN NAAIQINDPA ALDVEGDVSS RYKNLSSTLN KLYLWEKKLY QEVKSEEKIR VLHERKSEKL KRLDQKGAEA
601: HKVDMTRQLV RSLSTKIRIA IQVVDKISEK INKMRDEELW PQLNVLIQGL SKMWKGMLEC HRNQCQAIGE AKRLDAIASH KHLSDAHLEA TLQLEHELLN
701: WTLRFSCWVN AQKGYVRALN TWLMKCLLYV PEETADGRVP FSPGRIGAPP IFVICNQWSQ TIEGVSEKEV IDCMRDFASN VLQLWERDKH EMRQRMMVHK
801: DMERKVKNLE REDQKIQKGI HALDKRIVLI SGDETGLSLN RHVVYQSDTS KNSSLQVGLR HIFEAMERFT AKSLKVYEEL LQRIEEDDLA
001: MGCTSSKLDD LPAVALCRER CAFLEAAIHQ RYALAESHVA YTHSLREIGH SLHLFINHHH RFVASGGANV GDSPRLNLPP QRKGDLDDEA TNSPKKQKLA
101: SSHHNHNHAH SGSGSDSGHL EFDSDSDEDE EDDDDLDLDS LHHHSPPHHH LGNFPIPESA PMGGYMEQQP GYINPYPNPD MMGHPYSGGG SYMHMNYMKN
201: KSMPPSVVYE QRPTSPQRVY IGESSSSYPY PPQNSYFGYS NPVPGPGPGY YGSSSASTTA AATKPPPPPP SPPRSNGWDF LNPFDTYYPP YTPSRDSREL
301: REEEGIPDLE DDDSHYEVVK EVYGKPKFAA GGGHQPNPAA VHMMREESPS PPLDKSGAST SGGGDVGDAS AYQSRPSVSV EKEGMEYEVH VVEKKVVEDE
401: ERRSNATATR GGGGGGGPRA VPEVAKEIEN QFVKAAESGS EIAKLLEVGK HPYGRKHAAS KMLHGVTPSL PSTSGGTSSS AAAAVVPPTY ADIEEELASR
501: SRNLSSTLHK LHLWEKKLYH EVKAEEKLRL AHEKKLRKLK RLDQRGAEAI KVDKTRKLVR DMSTKIRIAI QVVDKISVTI NKIRDEDLWP QLNALIQGLT
601: RMWKTMLECH QSQCQAIREA QGLGPIRASK KLGDEHLEAT SLLGHELINW ILGFSSWVSA QKGYVKELNK WLMKCLLYEP EETPDGIVPF SPGRIGAPPI
701: FVICNQWSQA LDRISEKEVI EAMRSFTTSV LQLWEQDRLD TMMTGHGDSE KKVRNMDREE QRIQREIQAL EKKMILVAPG DGNSLSISGN VVYQSDTSSD
801: SLQGSLQRIF EAMERFTAES MRAYEDLLER TNEETAPREL EEEEEEILGF ARLRLGQKAP FRMMI
101: SSHHNHNHAH SGSGSDSGHL EFDSDSDEDE EDDDDLDLDS LHHHSPPHHH LGNFPIPESA PMGGYMEQQP GYINPYPNPD MMGHPYSGGG SYMHMNYMKN
201: KSMPPSVVYE QRPTSPQRVY IGESSSSYPY PPQNSYFGYS NPVPGPGPGY YGSSSASTTA AATKPPPPPP SPPRSNGWDF LNPFDTYYPP YTPSRDSREL
301: REEEGIPDLE DDDSHYEVVK EVYGKPKFAA GGGHQPNPAA VHMMREESPS PPLDKSGAST SGGGDVGDAS AYQSRPSVSV EKEGMEYEVH VVEKKVVEDE
401: ERRSNATATR GGGGGGGPRA VPEVAKEIEN QFVKAAESGS EIAKLLEVGK HPYGRKHAAS KMLHGVTPSL PSTSGGTSSS AAAAVVPPTY ADIEEELASR
501: SRNLSSTLHK LHLWEKKLYH EVKAEEKLRL AHEKKLRKLK RLDQRGAEAI KVDKTRKLVR DMSTKIRIAI QVVDKISVTI NKIRDEDLWP QLNALIQGLT
601: RMWKTMLECH QSQCQAIREA QGLGPIRASK KLGDEHLEAT SLLGHELINW ILGFSSWVSA QKGYVKELNK WLMKCLLYEP EETPDGIVPF SPGRIGAPPI
701: FVICNQWSQA LDRISEKEVI EAMRSFTTSV LQLWEQDRLD TMMTGHGDSE KKVRNMDREE QRIQREIQAL EKKMILVAPG DGNSLSISGN VVYQSDTSSD
801: SLQGSLQRIF EAMERFTAES MRAYEDLLER TNEETAPREL EEEEEEILGF ARLRLGQKAP FRMMI
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT4G35240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.