Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G348100.1 | Wheat | nucleus | 97.08 | 96.98 |
| TraesCS5D01G353500.1 | Wheat | nucleus | 97.08 | 96.58 |
| HORVU5Hr1G086500.2 | Barley | nucleus | 94.47 | 93.59 |
| EER97130 | Sorghum | nucleus | 72.68 | 76.34 |
| Os09t0547300-01 | Rice | nucleus | 72.58 | 75.73 |
| Zm00001d006286_P001 | Maize | nucleus | 72.16 | 75.71 |
| Zm00001d021452_P001 | Maize | nucleus | 71.74 | 73.11 |
| GSMUA_Achr3P14690_001 | Banana | nucleus | 39.73 | 54.12 |
| GSMUA_Achr1P18120_001 | Banana | cytosol | 37.85 | 53.38 |
| TraesCS7A01G273600.1 | Wheat | cytosol, mitochondrion, nucleus | 47.76 | 48.83 |
| GSMUA_Achr7P04020_001 | Banana | cytosol | 35.56 | 48.71 |
| PGSC0003DMT400043330 | Potato | mitochondrion | 35.14 | 41.76 |
| Solyc10g074470.1.1 | Tomato | cytosol | 34.72 | 41.47 |
| CDY17530 | Canola | cytosol | 30.66 | 41.41 |
| CDX76322 | Canola | cytosol | 30.34 | 41.16 |
| Bra009665.1-P | Field mustard | cytosol | 30.03 | 40.74 |
| VIT_03s0038g03260.t01 | Wine grape | cytosol | 34.31 | 40.52 |
| CDX88008 | Canola | nucleus | 30.03 | 40.28 |
| Solyc01g112050.2.1 | Tomato | nucleus | 37.23 | 40.11 |
| Bra020807.1-P | Field mustard | nucleus | 31.91 | 40.1 |
| PGSC0003DMT400048013 | Potato | nucleus | 37.85 | 39.76 |
| CDX69122 | Canola | nucleus | 30.97 | 39.55 |
| CDX75484 | Canola | cytosol, plastid | 28.68 | 39.45 |
| KRH14028 | Soybean | cytosol | 29.82 | 39.02 |
| TraesCS6A01G253600.1 | Wheat | nucleus | 30.97 | 38.93 |
| AT2G17110.1 | Thale cress | nucleus | 29.72 | 38.88 |
| TraesCS2A01G405700.1 | Wheat | cytosol | 30.76 | 38.76 |
| CDY07877 | Canola | cytosol | 28.88 | 38.74 |
| KRH74089 | Soybean | cytosol | 31.39 | 38.44 |
| Bra011597.1-P | Field mustard | nucleus | 32.85 | 37.68 |
| AT4G35240.1 | Thale cress | nucleus | 33.68 | 37.34 |
| KRH60958 | Soybean | cytosol | 23.77 | 34.44 |
| VIT_18s0001g00170.t01 | Wine grape | cytosol | 26.17 | 33.83 |
| KRH51633 | Soybean | cytosol | 23.25 | 33.58 |
| CDY31475 | Canola | nucleus | 19.08 | 30.4 |
| AT1G20530.1 | Thale cress | cytosol | 19.29 | 30.13 |
| TraesCS1A01G264800.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 25.65 | 27.58 |
| TraesCS5A01G335700.1 | Wheat | cytosol | 19.4 | 24.9 |
| TraesCS3A01G503100.1 | Wheat | cytosol | 18.35 | 23.78 |
| TraesCS4A01G376900.1 | Wheat | nucleus | 17.31 | 22.55 |
| TraesCS6A01G154500.2 | Wheat | cytosol | 14.6 | 22.19 |
| TraesCS3A01G210200.1 | Wheat | nucleus | 15.75 | 21.66 |
| TraesCS6A01G243100.1 | Wheat | mitochondrion | 11.89 | 20.14 |
| TraesCS1A01G247500.1 | Wheat | nucleus | 16.58 | 20.05 |
| TraesCS4A01G128000.1 | Wheat | cytosol | 17.0 | 20.0 |
| TraesCS5A01G189900.1 | Wheat | cytosol | 14.7 | 19.83 |
| TraesCS2A01G155900.1 | Wheat | nucleus | 14.6 | 19.2 |
| TraesCS2A01G099100.1 | Wheat | nucleus | 10.74 | 18.97 |
| TraesCS7A01G252800.1 | Wheat | nucleus | 15.75 | 17.64 |
| TraesCS1A01G218200.1 | Wheat | nucleus | 13.87 | 17.3 |
| TraesCS3A01G198900.1 | Wheat | nucleus | 14.49 | 17.14 |
| Bra025823.1-P | Field mustard | peroxisome | 19.6 | 16.38 |
| CDY29526 | Canola | peroxisome | 19.6 | 16.36 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G347200.1 | EnsemblPlantsGene:TraesCS5A01G347200 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF2 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5A:+:549574021..549578485
Molecular Weight (calculated)
104273.0 Da
IEP (calculated)
5.292
GRAVY (calculated)
-0.715
Length
959 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCGQSKLEE EKAVRHCRER SELLALAIRH RYTLADAHRA YADSLGRVGV ALHDFVRGVQ TLPPPPPEPT LHLPPGNRKG DGLPAASPAN NPAIASSSNG
101: QAPPPAAKQV RINPDDEHIH FHSDGDSDSE DGHIKFHSDD EADPGQRRPE IVRSAGDPGQ RPPPQQMGPP PYGSSAYGPP PSYGAPPGYG YGGYPPPPDY
201: GGMGGPGGYD PGYGGMGGAG GNVPGYSSMG PPPPSSGGYD PPGYGGIGGY GQSFFNMNYA RSQPPPPSVS HQHRPEATDA TVQTFFNISY ARGQPPPPSV
301: SFEQRPEASD ATVQTFFSTS YARGQPPPPS AAYEQRPQAS DARVHYYGDG GAQPPPRGYN GYASPPQSSY NQYAYGGYYG GAAAPPPADM PSSSREEAVP
401: PPPPSPPSVS TWDFLNPFET YGSYYDQPTA APAPYTPSRS SKDVREEEGI PDLEDEDMEV VKEAYGDDKH PLNGHTGKGK AAKEEGRSST GDELPRDSKS
501: SVPSSSGSSL DDVHVVEKSV VGEQARQHVA GLPPTGSEKT YVHDNEVVLE IKAQFERASS SAGEVSKMLE VGKMPYYQKG SGFKVSAMMF CGIPTMEEEF
601: LRFEEDKAMG CGNLSSTLQK LYMWERKLLQ EVKAEEEERL KYDRKRQDLQ MLDEKGAETE KIIATEKEIR KLSTRISIAI QVVNTISGKI SKLRDDELWP
701: QTCELIQGLM RMWDVMLECH QIQLHAISQA KNIDSMIDGA RFGEDHMDLI KHLELQLLDW TTCFAGWVNA QKNYVTTLND WLRKGVEYVP EETDDGVPPF
801: SPGRLGAPPI FVICNSWAAG VARISEKDVV KAMQAFASNV LHLWEKHRSQ QRQGMMANKG MDRGLRVMEK DEQAMRKALE AKNKKLVLVS DQTGVSLSAQ
901: VLHGAGPQAE NSSLQSSLRN IFEAMETFTA ASSNTYKELN LRAEEEKARV AGESGSSVP
101: QAPPPAAKQV RINPDDEHIH FHSDGDSDSE DGHIKFHSDD EADPGQRRPE IVRSAGDPGQ RPPPQQMGPP PYGSSAYGPP PSYGAPPGYG YGGYPPPPDY
201: GGMGGPGGYD PGYGGMGGAG GNVPGYSSMG PPPPSSGGYD PPGYGGIGGY GQSFFNMNYA RSQPPPPSVS HQHRPEATDA TVQTFFNISY ARGQPPPPSV
301: SFEQRPEASD ATVQTFFSTS YARGQPPPPS AAYEQRPQAS DARVHYYGDG GAQPPPRGYN GYASPPQSSY NQYAYGGYYG GAAAPPPADM PSSSREEAVP
401: PPPPSPPSVS TWDFLNPFET YGSYYDQPTA APAPYTPSRS SKDVREEEGI PDLEDEDMEV VKEAYGDDKH PLNGHTGKGK AAKEEGRSST GDELPRDSKS
501: SVPSSSGSSL DDVHVVEKSV VGEQARQHVA GLPPTGSEKT YVHDNEVVLE IKAQFERASS SAGEVSKMLE VGKMPYYQKG SGFKVSAMMF CGIPTMEEEF
601: LRFEEDKAMG CGNLSSTLQK LYMWERKLLQ EVKAEEEERL KYDRKRQDLQ MLDEKGAETE KIIATEKEIR KLSTRISIAI QVVNTISGKI SKLRDDELWP
701: QTCELIQGLM RMWDVMLECH QIQLHAISQA KNIDSMIDGA RFGEDHMDLI KHLELQLLDW TTCFAGWVNA QKNYVTTLND WLRKGVEYVP EETDDGVPPF
801: SPGRLGAPPI FVICNSWAAG VARISEKDVV KAMQAFASNV LHLWEKHRSQ QRQGMMANKG MDRGLRVMEK DEQAMRKALE AKNKKLVLVS DQTGVSLSAQ
901: VLHGAGPQAE NSSLQSSLRN IFEAMETFTA ASSNTYKELN LRAEEEKARV AGESGSSVP
001: MGCTSSKLDD LPAVALCRER CAFLEAAIHQ RYALAESHVA YTHSLREIGH SLHLFINHHH RFVASGGANV GDSPRLNLPP QRKGDLDDEA TNSPKKQKLA
101: SSHHNHNHAH SGSGSDSGHL EFDSDSDEDE EDDDDLDLDS LHHHSPPHHH LGNFPIPESA PMGGYMEQQP GYINPYPNPD MMGHPYSGGG SYMHMNYMKN
201: KSMPPSVVYE QRPTSPQRVY IGESSSSYPY PPQNSYFGYS NPVPGPGPGY YGSSSASTTA AATKPPPPPP SPPRSNGWDF LNPFDTYYPP YTPSRDSREL
301: REEEGIPDLE DDDSHYEVVK EVYGKPKFAA GGGHQPNPAA VHMMREESPS PPLDKSGAST SGGGDVGDAS AYQSRPSVSV EKEGMEYEVH VVEKKVVEDE
401: ERRSNATATR GGGGGGGPRA VPEVAKEIEN QFVKAAESGS EIAKLLEVGK HPYGRKHAAS KMLHGVTPSL PSTSGGTSSS AAAAVVPPTY ADIEEELASR
501: SRNLSSTLHK LHLWEKKLYH EVKAEEKLRL AHEKKLRKLK RLDQRGAEAI KVDKTRKLVR DMSTKIRIAI QVVDKISVTI NKIRDEDLWP QLNALIQGLT
601: RMWKTMLECH QSQCQAIREA QGLGPIRASK KLGDEHLEAT SLLGHELINW ILGFSSWVSA QKGYVKELNK WLMKCLLYEP EETPDGIVPF SPGRIGAPPI
701: FVICNQWSQA LDRISEKEVI EAMRSFTTSV LQLWEQDRLD TMMTGHGDSE KKVRNMDREE QRIQREIQAL EKKMILVAPG DGNSLSISGN VVYQSDTSSD
801: SLQGSLQRIF EAMERFTAES MRAYEDLLER TNEETAPREL EEEEEE
101: SSHHNHNHAH SGSGSDSGHL EFDSDSDEDE EDDDDLDLDS LHHHSPPHHH LGNFPIPESA PMGGYMEQQP GYINPYPNPD MMGHPYSGGG SYMHMNYMKN
201: KSMPPSVVYE QRPTSPQRVY IGESSSSYPY PPQNSYFGYS NPVPGPGPGY YGSSSASTTA AATKPPPPPP SPPRSNGWDF LNPFDTYYPP YTPSRDSREL
301: REEEGIPDLE DDDSHYEVVK EVYGKPKFAA GGGHQPNPAA VHMMREESPS PPLDKSGAST SGGGDVGDAS AYQSRPSVSV EKEGMEYEVH VVEKKVVEDE
401: ERRSNATATR GGGGGGGPRA VPEVAKEIEN QFVKAAESGS EIAKLLEVGK HPYGRKHAAS KMLHGVTPSL PSTSGGTSSS AAAAVVPPTY ADIEEELASR
501: SRNLSSTLHK LHLWEKKLYH EVKAEEKLRL AHEKKLRKLK RLDQRGAEAI KVDKTRKLVR DMSTKIRIAI QVVDKISVTI NKIRDEDLWP QLNALIQGLT
601: RMWKTMLECH QSQCQAIREA QGLGPIRASK KLGDEHLEAT SLLGHELINW ILGFSSWVSA QKGYVKELNK WLMKCLLYEP EETPDGIVPF SPGRIGAPPI
701: FVICNQWSQA LDRISEKEVI EAMRSFTTSV LQLWEQDRLD TMMTGHGDSE KKVRNMDREE QRIQREIQAL EKKMILVAPG DGNSLSISGN VVYQSDTSSD
801: SLQGSLQRIF EAMERFTAES MRAYEDLLER TNEETAPREL EEEEEE
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT4G35240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.