Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G202100.2 | Wheat | nucleus | 97.66 | 97.78 |
| TraesCS3B01G231600.1 | Wheat | cytosol | 94.82 | 93.89 |
| HORVU3Hr1G042920.6 | Barley | cytosol, nucleus | 93.96 | 86.79 |
| Os01t0500500-01 | Rice | nucleus, plasma membrane | 79.16 | 80.55 |
| KXG32552 | Sorghum | nucleus | 74.97 | 77.16 |
| Zm00001d040901_P001 | Maize | mitochondrion | 23.92 | 76.38 |
| CDX87081 | Canola | nucleus | 34.16 | 51.87 |
| GSMUA_Achr1P17130_001 | Banana | nucleus | 36.37 | 48.6 |
| KRH62002 | Soybean | cytosol | 40.94 | 47.5 |
| KRH52653 | Soybean | cytosol | 40.94 | 46.69 |
| VIT_04s0008g04200.t01 | Wine grape | cytosol | 39.33 | 45.12 |
| CDX80528 | Canola | nucleus | 40.32 | 44.61 |
| CDX88193 | Canola | nucleus | 39.95 | 43.96 |
| Bra009853.1-P | Field mustard | nucleus | 39.7 | 43.81 |
| Solyc08g068100.2.1 | Tomato | cytosol | 38.84 | 43.45 |
| AT5G25590.1 | Thale cress | nucleus | 40.94 | 42.84 |
| PGSC0003DMT400037619 | Potato | plastid | 33.29 | 41.8 |
| TraesCS1A01G247500.1 | Wheat | nucleus | 40.69 | 41.61 |
| TraesCS2A01G155900.1 | Wheat | nucleus | 36.74 | 40.88 |
| TraesCS3A01G210200.1 | Wheat | nucleus | 20.84 | 24.25 |
| TraesCS1A01G218200.1 | Wheat | nucleus | 22.81 | 24.06 |
| TraesCS6A01G243100.1 | Wheat | mitochondrion | 16.65 | 23.85 |
| TraesCS5A01G335700.1 | Wheat | cytosol | 18.99 | 20.62 |
| TraesCS2A01G099100.1 | Wheat | nucleus | 13.69 | 20.44 |
| TraesCS6A01G154500.2 | Wheat | cytosol | 14.8 | 19.02 |
| TraesCS4A01G376900.1 | Wheat | nucleus | 16.4 | 18.07 |
| TraesCS5A01G189900.1 | Wheat | cytosol | 15.04 | 17.16 |
| TraesCS4A01G128000.1 | Wheat | cytosol | 16.65 | 16.56 |
| TraesCS6A01G253600.1 | Wheat | nucleus | 15.04 | 15.99 |
| TraesCS1A01G264800.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 17.39 | 15.81 |
| TraesCS2A01G405700.1 | Wheat | cytosol | 14.3 | 15.24 |
| TraesCS7A01G273600.1 | Wheat | cytosol, mitochondrion, nucleus | 17.26 | 14.93 |
| TraesCS5A01G347200.1 | Wheat | nucleus | 17.14 | 14.49 |
| TraesCS3A01G503100.1 | Wheat | cytosol | 13.19 | 14.46 |
| TraesCS7A01G252800.1 | Wheat | nucleus | 14.43 | 13.67 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G198900.1 | EnsemblPlantsGene:TraesCS3A01G198900 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF12 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr3A:+:321104016..321114556
Molecular Weight (calculated)
91603.8 Da
IEP (calculated)
5.442
GRAVY (calculated)
-0.745
Length
811 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCAQSKIDQ EEAVCRCRDR KRLMADAVQA RNAFAAAHSA YTVLLKSTGG ALSDFAHGEA PDPSMIASHS HQAAVAAAAA GASASAPPPP TTTTVLIPPS
101: PPPPPFMDFP HGSLQRSSST PNIPMPDPRA ATKNRAPASA AIQEEEDGEE DGGHIITDSD DDDDDDDDDD DDDDDDDDDD DDHHEHDDFS MDDMVHGQPP
201: KRGVMDSMGS SPVTPPPPPQ LNPSPITPAS ATPPPPMPEA QMATWDYFFG PTPTPPPTLE QQTDDTWMDR REKESVPEVK APVMNPAVSE ASEPSRGAEE
301: WAERPPQTAL EKAEAIDELA ANLPPSKPIV RKPPKAPGLQ PEVHHQHASS MGSVETRKGK IMMVSASLLQ IIAQLDDNFL RSSESAHDVS KKLEATRMHY
401: HSNHADSRGH IDHSTKIMHV ITWNRSFKNL PDQEDLGVNF EIDERFETHA TVLDRMLAWE KKLYDEVKAG ELMKIDYQKK VDLLHKQKKR GVKLETLEKT
501: KAAVSHLHTR YIVDMQSMDS TVSEINRLRD KQLYPKLVDL VDGMANMWSS MHRHHKSQFL IISGIRAFEV PPVPRETTDL HYKQTCELRD IVREWHMQFD
601: KLMEHQKGYI RALNAWLKLN LISIESNLKE KVSSPPRQVE PPIKNLLYAW HDQLERLPVE LAKTAIKSFT EVISNIVLLQ EEEVSLRRRC DETRRDLDRK
701: RAQFEDWHRR YTERKASQGE EANPEAANTP SLDHVNERRI AIEEVEIRLK EEEKLHLRLA RQVREKTLAN LRMHLPELFR NMADFSFFCH DMYSSLRKSA
801: VLPMLRDEVQ G
101: PPPPPFMDFP HGSLQRSSST PNIPMPDPRA ATKNRAPASA AIQEEEDGEE DGGHIITDSD DDDDDDDDDD DDDDDDDDDD DDHHEHDDFS MDDMVHGQPP
201: KRGVMDSMGS SPVTPPPPPQ LNPSPITPAS ATPPPPMPEA QMATWDYFFG PTPTPPPTLE QQTDDTWMDR REKESVPEVK APVMNPAVSE ASEPSRGAEE
301: WAERPPQTAL EKAEAIDELA ANLPPSKPIV RKPPKAPGLQ PEVHHQHASS MGSVETRKGK IMMVSASLLQ IIAQLDDNFL RSSESAHDVS KKLEATRMHY
401: HSNHADSRGH IDHSTKIMHV ITWNRSFKNL PDQEDLGVNF EIDERFETHA TVLDRMLAWE KKLYDEVKAG ELMKIDYQKK VDLLHKQKKR GVKLETLEKT
501: KAAVSHLHTR YIVDMQSMDS TVSEINRLRD KQLYPKLVDL VDGMANMWSS MHRHHKSQFL IISGIRAFEV PPVPRETTDL HYKQTCELRD IVREWHMQFD
601: KLMEHQKGYI RALNAWLKLN LISIESNLKE KVSSPPRQVE PPIKNLLYAW HDQLERLPVE LAKTAIKSFT EVISNIVLLQ EEEVSLRRRC DETRRDLDRK
701: RAQFEDWHRR YTERKASQGE EANPEAANTP SLDHVNERRI AIEEVEIRLK EEEKLHLRLA RQVREKTLAN LRMHLPELFR NMADFSFFCH DMYSSLRKSA
801: VLPMLRDEVQ G
001: MGCAQSKIEN EEAVTRCKER KQLMKDAVTA RNAFAAAHSA YAMALKNTGA ALSDYSHGEF LVSNHSSSSA AAAIASTSSL PTAISPPLPS STAPVSNSTA
101: SSSSAAVPQP IPDTLPPPPP PPPLPLQRAA TMPEMNGRSG GGHAGSGLNG IEEDGALDND DDDDDDDDDS EMENRDRLIR KSRSRGGSTR GNRTTIEDHH
201: LQEEKAPPPP PLANSRPIPP PRQHQHQHQQ QQQQPFYDYF FPNVENMPGT TLEDTPPQPQ PQPTRPVPPQ PHSPVVTEDD EDEEEEEEEE EEEEETVIER
301: KPLVEERPKR VEEVTIELEK VTNLRGMKKS KGIGIPGERR GMRMPVTATH LANVFIELDD NFLKASESAH DVSKMLEATR LHYHSNFADN RGHIDHSARV
401: MRVITWNRSF RGIPNADDGK DDVDLEENET HATVLDKLLA WEKKLYDEVK AGELMKIEYQ KKVAHLNRVK KRGGHSDSLE RAKAAVSHLH TRYIVDMQSM
501: DSTVSEINRL RDEQLYLKLV HLVEAMGKMW EMMQIHHQRQ AEISKVLRSL DVSQAVKETN DHHHERTIQL LAVVQEWHTQ FCRMIDHQKE YIKALGGWLK
601: LNLIPIESTL KEKVSSPPRV PNPAIQKLLH AWYDRLDKIP DEMAKSAIIN FAAVVSTIMQ QQEDEISLRN KCEETRKELG RKIRQFEDWY HKYIQKRGPE
701: GMNPDEADND HNDEVAVRQF NVEQIKKRLE EEEEAYHRQS HQVREKSLAS LRTRLPELFQ AMSEVAYSCS DMYRAITYAS KRQSQSERHQ KPSQGQSS
101: SSSSAAVPQP IPDTLPPPPP PPPLPLQRAA TMPEMNGRSG GGHAGSGLNG IEEDGALDND DDDDDDDDDS EMENRDRLIR KSRSRGGSTR GNRTTIEDHH
201: LQEEKAPPPP PLANSRPIPP PRQHQHQHQQ QQQQPFYDYF FPNVENMPGT TLEDTPPQPQ PQPTRPVPPQ PHSPVVTEDD EDEEEEEEEE EEEEETVIER
301: KPLVEERPKR VEEVTIELEK VTNLRGMKKS KGIGIPGERR GMRMPVTATH LANVFIELDD NFLKASESAH DVSKMLEATR LHYHSNFADN RGHIDHSARV
401: MRVITWNRSF RGIPNADDGK DDVDLEENET HATVLDKLLA WEKKLYDEVK AGELMKIEYQ KKVAHLNRVK KRGGHSDSLE RAKAAVSHLH TRYIVDMQSM
501: DSTVSEINRL RDEQLYLKLV HLVEAMGKMW EMMQIHHQRQ AEISKVLRSL DVSQAVKETN DHHHERTIQL LAVVQEWHTQ FCRMIDHQKE YIKALGGWLK
601: LNLIPIESTL KEKVSSPPRV PNPAIQKLLH AWYDRLDKIP DEMAKSAIIN FAAVVSTIMQ QQEDEISLRN KCEETRKELG RKIRQFEDWY HKYIQKRGPE
701: GMNPDEADND HNDEVAVRQF NVEQIKKRLE EEEEAYHRQS HQVREKSLAS LRTRLPELFQ AMSEVAYSCS DMYRAITYAS KRQSQSERHQ KPSQGQSS
Arabidopsis Description
BZIP protein, putative; 48652-45869 [Source:UniProtKB/TrEMBL;Acc:Q9C824]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.