CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52653	Soybean	cytosol	95.28	93.67
CDX87081	Canola	nucleus	52.36	68.54
VIT_04s0008g04200.t01	Wine grape	cytosol	65.67	64.92
Bra009853.1-P	Field mustard	nucleus	63.09	60.0
CDX88193	Canola	nucleus	62.66	59.43
CDX80528	Canola	nucleus	62.23	59.35
Solyc08g068100.2.1	Tomato	cytosol	60.23	58.07
AT5G25590.1	Thale cress	nucleus	63.09	56.9
GSMUA_Achr11P...	Banana	cytosol	53.51	56.67
PGSC0003DMT400037619	Potato	plastid	52.07	56.35
GSMUA_Achr3P24800_001	Banana	nucleus	45.64	52.9
Zm00001d040901_P001	Maize	mitochondrion	18.6	51.18
KRH09858	Soybean	nucleus	53.93	50.67
KRH23466	Soybean	nucleus	54.08	50.47
GSMUA_Achr1P17130_001	Banana	nucleus	42.35	48.76
EES18173	Sorghum	nucleus	53.22	48.5
TraesCS1B01G258100.1	Wheat	nucleus	53.65	47.35
TraesCS1A01G247500.1	Wheat	nucleus	53.51	47.16
Os05t0394200-01	Rice	nucleus	44.64	47.06
TraesCS1D01G246700.1	Wheat	nucleus	45.49	46.97
Os01t0500500-01	Rice	nucleus, plasma membrane	49.5	43.41
KXG32552	Sorghum	nucleus	47.93	42.51
Zm00001d010488_P008	Maize	cytosol	46.92	41.68
TraesCS3A01G198900.1	Wheat	nucleus	47.5	40.94
TraesCS3D01G202100.2	Wheat	nucleus	47.35	40.86
TraesCS3B01G231600.1	Wheat	cytosol	46.07	39.32
HORVU3Hr1G042920.6	Barley	cytosol, nucleus	47.07	37.47
KRH28815	Soybean	cytosol	19.6	30.31
KRH76635	Soybean	cytosol	26.18	29.28
KRH12768	Soybean	cytosol	22.46	25.0
KRH08031	Soybean	cytosol	15.45	24.71
KRH37731	Soybean	nucleus	22.32	24.22
KRH01066	Soybean	nucleus	24.18	23.18
KRH66512	Soybean	nucleus	25.75	22.53
KRH40173	Soybean	nucleus	23.61	21.48
KRH51633	Soybean	cytosol	20.31	21.39
KRH60958	Soybean	cytosol	20.03	21.15
KRG97595	Soybean	cytosol	19.89	21.03
KRH19063	Soybean	nucleus	22.17	20.69
KRH43215	Soybean	nucleus	21.32	20.11
KRH59380	Soybean	nucleus	21.03	20.0
KRH02818	Soybean	nucleus	21.17	19.87
KRG90664	Soybean	cytosol	21.6	19.59
KRH36090	Soybean	nucleus	21.46	19.56
KRH37304	Soybean	nucleus	20.31	18.56
KRH74089	Soybean	cytosol	20.74	18.52
KRH12287	Soybean	nucleus	20.17	18.24
KRH14028	Soybean	cytosol	18.88	18.01
KRG89850	Soybean	nucleus	19.89	17.73
KRH14687	Soybean	nucleus	19.6	17.5
KRH53256	Soybean	cytosol	21.03	17.46
KRH64648	Soybean	cytosol	20.74	17.32
KRH18693	Soybean	nucleus	19.89	17.27
KRH73448	Soybean	nucleus	19.17	17.11
KRH28816	Soybean	cytosol	0.43	9.09

Protein Annotations

EMBL:ACUP02002207	EnsemblPlants:KRH62002	EnsemblPlantsGene:GLYMA_04G079400	EntrezGene:100807189	InterPro:DUF630	InterPro:DUF632
ncoils:Coil	PANTHER:PTHR21450	PANTHER:PTHR21450:SF7	PFAM:PF04782	PFAM:PF04783	ProteinID:KRH62002
ProteinID:KRH62002.1	SEG:seg	UniParc:UPI0002339C68	UniProt:I1JUR1	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr4:-:6638239..6642261

Molecular Weight (calculated)

79447.9 Da

IEP (calculated)

6.086

GRAVY (calculated)

-0.752

Length

699 amino acids

Sequence
(BLAST)

001: MGCAQSRIDN EESVSRCKDR KNLMKDAVVA RNAFAAGHSG YAFALKNTGA ALSDYAHGET YDLHVPPLDP PSSSADPPPP PPPPIDDSLP PPPPPLPEFS
101: PAPAPLARSV TMPAGVMHHH HRSPIPLSIA EEDEEEEATP KQAKKTAGSP PEMKTPPPPP PESKGMAWDY FFMVENMPGP SLSAEDDNDS HIHDDDGEGK
201: MENVVEDEVE PKTPEKVQEH ENVNVHEEHD DEISEAKKHI EHSKTAPAEF RRAIKVVPSV TLMQILNVLD DHFLKASEGA QEVTKMLEAT RLHYHSNFAD
301: NRGHIDHSAR VMRVITWNRS FRGVSNGDAA KDDIDSEEYE THATVLDKLL AWEKKLYEEV KQGELMKFEY QRKVAILNKQ KKRGASAESL EKTKAAVSHL
401: HTRYIVDMQS MDSTVSEVNH IRDAQLYPKL VALIIEMANM WENMCIHHDS QLKIVTDLKS LDISQAPKET TKHHYDRTVQ LEKVIQEWHL QFEKLVTQQK
501: HYIKALNSWL KLNLIPIESN LKEKISSPPK AQNPPIQALL HAWHDYVDKL PDELAKSAIS SFVAVIKTII LQQEEEMKLK ERCEETRKEY FKKKQAFEEW
601: YQKHLMRRGP DEAEHERGEE VNANNPVSER QFVVESLKKR LEEEIESHQK HCVQVREKSL QSLKTRLPEL FRALSDYAHA CADAYEKLKL ITQSRGGEA

Best Arabidopsis Sequence Match ( AT5G25590.1 )
(BLAST)

001: MGCAQSRVDN EEAVARCKER RNVIKEAVSA SKAFAAGHFA YAIALKNTGA ALSDYGHGES DQKALDDVLL DQQHYEKQSR NNVDPASPQP PPPPPIENLP
101: PPPPPLPKFS PSPIKRAISL PSMAVRGRKV QTLDGMAIEE EEEDEEEEEE VKGSGRDTAQ EEEEPRTPEN VGKSNGRKRL EKTTPEIVSA SPANSMAWDY
201: FFMVENMPGP NLDDREVRNG YENQSSHFQF NEEDDEEEEE EERSGIYRKK SGSGKVVEEM EPKTPEKVEE EEEEDEEEDE EEEEEEEEEV VVEVKKKKKG
301: KAKIEHSSTA PPEFRRAVAK TSAAASSSVN LMKILDEIDD RFLKASECAQ EVSKMLEATR LHYHSNFADN RGYVDHSARV MRVITWNKSL RGISNGEGGK
401: DDQESDEHET HATVLDKLLA WEKKLYDEVK QGELMKIEYQ KKVSLLNRHK KRGASAETVE KTKAAVSHLH TRYIVDMQSM DSTVSEVNRL RDDQLYPRLV
501: ALVEGMAKMW TNMCIHHDTQ LGIVGELKAL EISTSLKETT KQHHHQTRQF CTVLEEWHVQ FDTLVTHQKQ YINSLNNWLK LNLIPIESSL KEKVSSPPRP
601: QRPPIQALLH SWHDRLEKLP DEVAKSAISS FAAVIKTILL HQEEEMKLKE KCEETRREFI RKKQGFEDWY QKHLQKRGPT EEAEGGDDAT TSSRDHVTER
701: RIAVETLKKR LEEEEEAHQR HCVQVREKSL NSLKIRLPEI FRALSDYAHA CADSYEKLRI ISQSQKSNGG ATESS

Arabidopsis Description

DNA ligase (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q8RWW9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.