Factsheet for GSMUA_Achr1P17130_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87081	Canola	nucleus	42.5	48.31
Zm00001d040901_P001	Maize	mitochondrion	19.93	47.64
GSMUA_Achr11P...	Banana	cytosol	50.25	46.21
GSMUA_Achr3P24800_001	Banana	nucleus	43.0	43.28
KRH62002	Soybean	cytosol	48.76	42.35
KRH52653	Soybean	cytosol	49.26	42.05
VIT_04s0008g04200.t01	Wine grape	cytosol	48.93	42.01
CDX88193	Canola	nucleus	45.96	37.86
Bra009853.1-P	Field mustard	nucleus	45.8	37.82
CDX80528	Canola	nucleus	45.47	37.65
KXG32552	Sorghum	nucleus	48.76	37.56
Solyc08g068100.2.1	Tomato	cytosol	44.81	37.52
Os01t0500500-01	Rice	nucleus, plasma membrane	48.76	37.14
TraesCS3A01G198900.1	Wheat	nucleus	48.6	36.37
TraesCS3B01G231600.1	Wheat	cytosol	48.76	36.14
AT5G25590.1	Thale cress	nucleus	45.96	36.0
TraesCS3D01G202100.2	Wheat	nucleus	47.94	35.93
PGSC0003DMT400037619	Potato	plastid	37.73	35.45
HORVU3Hr1G042920.6	Barley	cytosol, nucleus	47.28	32.69
GSMUA_Achr1P26500_001	Banana	cytosol	22.57	26.0
GSMUA_Achr3P00690_001	Banana	nucleus	20.43	24.46
GSMUA_Achr9P30410_001	Banana	cytosol	21.58	21.3
GSMUA_Achr6P32100_001	Banana	cytosol	20.76	20.93
GSMUA_Achr5P00570_001	Banana	cytosol	22.41	20.36
GSMUA_Achr1P07380_001	Banana	cytosol, nucleus, peroxisome	18.12	20.07
GSMUA_Achr11P...	Banana	nucleus	23.89	20.06
GSMUA_Achr9P05210_001	Banana	nucleus	21.25	19.97
GSMUA_Achr2P22150_001	Banana	cytosol	19.11	19.66
GSMUA_Achr7P16020_001	Banana	nucleus	20.1	19.52
GSMUA_Achr4P21640_001	Banana	nucleus	22.41	19.43
GSMUA_Achr8P10940_001	Banana	nucleus	23.06	19.02
GSMUA_Achr8P34030_001	Banana	cytosol	18.62	18.96
GSMUA_Achr11P...	Banana	mitochondrion	20.92	18.9
GSMUA_Achr11P...	Banana	cytosol	20.1	18.32
GSMUA_Achr7P04930_001	Banana	nucleus	17.3	17.71
GSMUA_Achr3P00490_001	Banana	nucleus	17.96	17.52
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	18.62	17.15
GSMUA_Achr7P04020_001	Banana	cytosol	19.77	17.14
GSMUA_Achr3P22040_001	Banana	cytosol	18.78	16.62
GSMUA_Achr1P18120_001	Banana	cytosol	18.62	16.62
GSMUA_Achr3P14690_001	Banana	nucleus	18.78	16.19
GSMUA_Achr9P08510_001	Banana	nucleus	19.77	15.35
GSMUA_Achr3P19020_001	Banana	cytosol	17.3	12.73

Protein Annotations

EnsemblPlants:GSMUA_Achr1P17130_001	EnsemblPlants:GSMUA_Achr1T17130_001	EnsemblPlantsGene:GSMUA_Achr1G17130_001	InterPro:DUF630	InterPro:DUF632	PANTHER:PTHR21450
PANTHER:PTHR21450:SF7	PFAM:PF04782	PFAM:PF04783	SEG:seg	UniParc:UPI000296CD08	UniProt:M0S0M1
MapMan:35.1	:	:	:	:	:

Description

BZIP protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G17130_001]

Coordinates

chr1:+:12786872..12796060

Molecular Weight (calculated)

68375.3 Da

IEP (calculated)

8.717

GRAVY (calculated)

-0.603

Length

607 amino acids

Sequence
(BLAST)

001: MGCAQSKIEN EESVVRCKNR KLFMRDAVAS RNAFAAAQAA YAVALKNTGA ALSEFGQSEL HDHGQSHASA AAASSSSSSS SVATIETEQE KRAPPSPVRT
101: DGAPGDETQA TPTKVVDEPS PPPPSKQVKK VKHGGSADHQ HAASAGASET KRSKTPAPSV NLIQILNELD DHFLKASESA HEALSHLPFS IRVIIFTHSV
201: ILYSGHIDHS AILMRVITWN RSIKGLSQDV VKDDFDNEEW ETHAAILDKM LAWEKKLYDE VKAGELMKID YQKKLALLNK QKKHGANSMA LEKIKSVVSH
301: LHTRYIVDMQ SMDSTVSEIN RLRDDQLYPR LKELVNGMAK MWETMRFHHG SQLKIIKEIR GLDIPLAPRE TSKQHHNRTV QLWKMVGEWD SQFDKLMSNQ
401: KDYIKALNRW LNLNVVPIER SSRKDASSPP EQADPLIKIL LHAWHDQLEN LPVDRAKSSL STFSGAVQAI MLCQVEELNL KLKWDDAHRD CERKKHEFDV
501: WHHKYTERIT ATSSDEVNPE TVEGATQQDL VSEKKAVVDN AESKLRVSEE SYRKQCKMVR DKSLTSLKTH LPELFRAMLD FASSCAEMYK RLSSIRESQS
601: LKMKKKS

Best Arabidopsis Sequence Match ( AT1G52320.5 )
(BLAST)

001: MGCAQSKIEN EEAVTRCKER KQLMKDAVTA RNAFAAAHSA YAMALKNTGA ALSDYSHGEF LVSNHSSSSA AAAIASTSSL PTAISPPLPS STAPVSNSTA
101: SSSSAAVPQP IPDTLPPPPP PPPLPLQRAA TMPEMNGRSG GGHAGSGLNG IEEDGALDND DDDDDDDDDS EMENRDRLIR KSRSRGGSTR GNRTTIEDHH
201: LQEEKAPPPP PLANSRPIPP PRQHQHQHQQ QQQQPFYDYF FPNVENMPGT TLEDTPPQPQ PQPTRPVPPQ PHSPVVTEDD EDEEEEEEEE EEEEETVIER
301: KPLVEERPKR VEEVTIELEK VTNLRGMKKS KGIGIPGERR GMRMPVTATH LANVFIELDD NFLKASESAH DVSKMLEATR LHYHSNFADN RGHIDHSARV
401: MRVITWNRSF RGIPNADDGK DDVDLEENET HATVLDKLLA WEKKLYDEVK AGELMKIEYQ KKVAHLNRVK KRGGHSDSLE RAKAAVSHLH TRYIVDMQSM
501: DSTVSEINRL RDEQLYLKLV HLVEAMGKMW EMMQIHHQRQ AEISKVLRSL DVSQAVKETN DHHHERTIQL LAVVQEWHTQ FCRMIDHQKE YIKALGGWLK
601: LNLIPIESTL KEKVSSPPRV PNPAIQKLLH AWYDRLDKIP DEMAKSAIIN FAAVVSTIMQ QQEDEISLRN KCEETRKELG RKIRQFEDWY HKYIQKRGPE
701: GMNPDEADND HNDEVAVRQF NVEQIKKRLE EEEEAYHRQS HQVREKSLAS LRTRLPELFQ AMSEVAYSCS DMYRAITYAS KRQSQSERHQ KPSQGQSS

Arabidopsis Description

BZIP protein, putative; 48652-45869 [Source:UniProtKB/TrEMBL;Acc:Q9C824]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.