Factsheet for GSMUA_Achr4P21640_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	nucleus	69.0	66.81
GSMUA_Achr8P10940_001	Banana	nucleus	67.43	64.13
Os10t0562700-01	Rice	nucleus	64.57	58.93
TraesCS1B01G231600.1	Wheat	nucleus	63.71	58.0
TraesCS1D01G219800.1	Wheat	nucleus	63.86	57.98
TraesCS1A01G218200.1	Wheat	nucleus	63.43	57.74
Zm00001d029946_P003	Maize	nucleus	63.43	57.0
EER94480	Sorghum	nucleus	63.29	56.43
Zm00001d000039_P001	Maize	nucleus	62.86	56.34
CDX83412	Canola	nucleus	51.14	53.19
AT1G02110.1	Thale cress	nucleus	51.57	51.35
CDX71821	Canola	nucleus	52.0	51.27
CDY41178	Canola	nucleus	52.29	50.76
Bra007523.1-P	Field mustard	nucleus	52.29	50.62
CDY42691	Canola	nucleus	51.86	50.21
KRH01066	Soybean	nucleus	52.14	50.07
CDX95620	Canola	nucleus	49.43	49.78
CDY56992	Canola	nucleus	51.43	49.52
Bra000365.1-P	Field mustard	nucleus	54.71	47.76
KRH40173	Soybean	nucleus	52.29	47.66
Bra014497.1-P	Field mustard	nucleus	51.71	47.51
PGSC0003DMT400066867	Potato	nucleus	56.71	46.6
VIT_15s0021g01550.t01	Wine grape	nucleus	56.14	46.51
AT3G60320.1	Thale cress	nucleus	52.86	46.48
KRH66512	Soybean	nucleus	52.43	45.93
Solyc01g090270.2.1	Tomato	nucleus	56.0	44.75
GSMUA_Achr1P26500_001	Banana	cytosol	29.57	39.28
GSMUA_Achr3P00690_001	Banana	nucleus	27.14	37.48
GSMUA_Achr9P30410_001	Banana	cytosol	26.71	30.41
GSMUA_Achr5P00570_001	Banana	cytosol	28.43	29.79
GSMUA_Achr11P...	Banana	cytosol	24.29	25.76
GSMUA_Achr3P24800_001	Banana	nucleus	21.29	24.71
GSMUA_Achr1P07380_001	Banana	cytosol, nucleus, peroxisome	18.71	23.91
GSMUA_Achr8P34030_001	Banana	cytosol	20.29	23.83
GSMUA_Achr1P17130_001	Banana	nucleus	19.43	22.41
GSMUA_Achr2P22150_001	Banana	cytosol	18.0	21.36
GSMUA_Achr3P22040_001	Banana	cytosol	20.71	21.14
GSMUA_Achr3P14690_001	Banana	nucleus	20.29	20.17
GSMUA_Achr1P18120_001	Banana	cytosol	19.29	19.85
GSMUA_Achr7P04020_001	Banana	cytosol	19.71	19.71
GSMUA_Achr7P16020_001	Banana	nucleus	17.57	19.68
GSMUA_Achr11P...	Banana	mitochondrion	18.86	19.64
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	18.14	19.27
GSMUA_Achr6P32100_001	Banana	cytosol	16.29	18.94
GSMUA_Achr7P04930_001	Banana	nucleus	15.86	18.72
GSMUA_Achr3P00490_001	Banana	nucleus	16.57	18.65
GSMUA_Achr11P...	Banana	cytosol	17.71	18.62
GSMUA_Achr9P05210_001	Banana	nucleus	16.29	17.65
GSMUA_Achr9P08510_001	Banana	nucleus	19.0	17.01
GSMUA_Achr3P19020_001	Banana	cytosol	19.0	16.12

Protein Annotations

EnsemblPlants:GSMUA_Achr4P21640_001	EnsemblPlants:GSMUA_Achr4T21640_001	EnsemblPlantsGene:GSMUA_Achr4G21640_001	InterPro:DUF630	InterPro:DUF632	ncoils:Coil
PANTHER:PTHR21450	PANTHER:PTHR21450:SF9	PFAM:PF04782	PFAM:PF04783	SEG:seg	UniParc:UPI000294BBD7
UniProt:M0SQX7	MapMan:35.1	:	:	:	:

Description

DUF630/DUF632 domains containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G21640_001]

Coordinates

chr4:+:22057561..22062412

Molecular Weight (calculated)

77735.8 Da

IEP (calculated)

8.575

GRAVY (calculated)

-0.524

Length

700 amino acids

Sequence
(BLAST)

001: MGCTASRVEN EDTVRRCRER HRLIKEAVHS RHHFASAHSD YLRSLRDAAA ALTRFALGEP LGVSEHAPPV LLRSSAGPST LPPPTPQPHP PPPPPFYFSS
101: CSSPPSPSPG IQLPRVLPVS GSTDTNLRNP SVAAPPGRFA AMNSTYPASP SHSSSAWSTW DWEYFYPPSP PSSEFFDRRR AELEEKNRDQ HHHLAMEVEK
201: MEGGGGREEV HCRQWGEPHS SSTSSSTRSD DEEPEADKDS RSTAIYARSD YDGASERSRL TPSEIGSLTA TVVVRHRNLA EIVAAIDEYF AKAAAAGDAV
301: SDLLETGHAR FDRNLSHLKK TVYHSNGVLR ALSSSWTSKP PLAIRYQLNT EAMESGGGKK SHCCTLEQLL AWEKKLFEEV KAREGVKIEH EKKLSTLQSL
401: ECRGKDDSKL DKTKTSITKL QSLIVVTSQA VTTTSSAITR VRDDELAPQL FEICYNLLSM WKQMNRFHEA QNHVVQQVRG LVNGAFAGAT TSDLHRLATR
501: DLEAAISAWH SSFDRLIKYQ RDYVNALYGW LKLTLLRQAL DRLPDKVASE AIKSFMSVIH VICTKQAEEL KIKKRAETYS KELEKKSTSL RSIEKKYYQS
601: YSTVGIGLPG GGIENKGHVL FDARDPLAEK KLEIAACRRK VEDEMVKHAK AVEVTRSMTL NNIQTGLPGV FQAITGFSGL FVEVLEAVCR RAGSQHLNTI

Best Arabidopsis Sequence Match ( AT1G02110.1 )
(BLAST)

001: MGCTASKLDS EDAVRRCKER RRLMKDAVYA RHHLAAAHSD YCRSLRLTGS ALSSFAAGEP LSVSENTPAV FLRPSSSQDA PRVPSSHSPE PPPPPIRSKP
101: KPTRPRRLPH ILSDSSPSSS PATSFYPTAH QNSTYSRSPS QASSVWNWEN FYPPSPPDSE YFERKARQNH KHRPPSDYDA ETERSDHDYC HSRRDAAEEV
201: HCSEWGDDHD RFTATSSSDG DGEVETHVSR SGIEEEPVKQ PHQDPNGKEH SDHVTTSSDC YKTKLVVRHK NLKEILDAVQ DYFDKAASAG DQVSAMLEIG
301: RAELDRSFSK LRKTVYHSSS VFSNLSASWT SKPPLAVKYK LDASTLNDEQ GGLKSLCSTL DRLLAWEKKL YEDVKAREGV KIEHEKKLSA LQSQEYKGGD
401: ESKLDKTKTS ITRLQSLIIV SSEAVLTTSN AILRLRDTDL VPQLVELCHG LMYMWKSMHE YHEIQNNIVQ QVRGLINQTE RGESTSEVHR QVTRDLESAV
501: SLWHSSFCRI IKFQREFICS LHAWFKLSLV PLSNGDPKKQ RPDSFALCEE WKQSLERVPD TVASEAIKSF VNVVHVISIK QAEEVKMKKR TESAGKELEK
601: KASSLRSIER KYYQAYSTVG IGPGPEVLDS RDPLSEKKCE LAACQRQVED EVMRHVKAVE VTRAMTLNNL QTGLPNVFQA LTSFSSLFTE SLQTVCSRSY
701: SIN

Arabidopsis Description

BZIP domain class transcription factor (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q56W45]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.