Factsheet for GSMUA_Achr1P26500_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P00690_001	Banana	nucleus	66.22	68.84
Os09t0538700-01	Rice	nucleus	67.55	54.52
KXG36086	Sorghum	nucleus	66.03	53.05
Zm00001d022626_P001	Maize	nucleus	65.09	52.77
KRH76635	Soybean	cytosol	61.67	52.0
VIT_04s0023g03760.t01	Wine grape	mitochondrion	61.67	51.83
TraesCS5D01G336000.1	Wheat	nucleus	64.9	51.43
TraesCS5B01G330400.1	Wheat	nucleus	64.9	51.04
PGSC0003DMT400009224	Potato	nucleus	38.14	50.89
KRH28815	Soybean	cytosol	43.45	50.66
HORVU5Hr1G084030.15	Barley	nucleus	64.52	50.15
Solyc02g083610.2.1	Tomato	nucleus	58.63	48.51
KRH28816	Soybean	cytosol	2.85	45.45
CDX77992	Canola	nucleus	53.7	44.99
CDX73734	Canola	nucleus	53.89	44.38
Bra036821.1-P	Field mustard	nucleus	53.7	44.22
KRH08031	Soybean	cytosol	32.07	38.67
AT3G51290.2	Thale cress	cytosol	54.08	35.71
GSMUA_Achr9P30410_001	Banana	cytosol	40.99	35.12
GSMUA_Achr5P00570_001	Banana	cytosol	42.5	33.53
GSMUA_Achr4P21640_001	Banana	nucleus	39.28	29.57
GSMUA_Achr11P...	Banana	nucleus	40.23	29.32
GSMUA_Achr8P10940_001	Banana	nucleus	39.28	28.12
GSMUA_Achr11P...	Banana	cytosol	30.93	24.7
GSMUA_Achr1P07380_001	Banana	cytosol, nucleus, peroxisome	23.91	22.99
GSMUA_Achr3P24800_001	Banana	nucleus	26.19	22.89
GSMUA_Achr1P17130_001	Banana	nucleus	26.0	22.57
GSMUA_Achr2P22150_001	Banana	cytosol	24.29	21.69
GSMUA_Achr8P34030_001	Banana	cytosol	23.34	20.64
GSMUA_Achr1P18120_001	Banana	cytosol	24.67	19.12
GSMUA_Achr6P32100_001	Banana	cytosol	21.82	19.1
GSMUA_Achr3P22040_001	Banana	cytosol	24.48	18.8
GSMUA_Achr3P14690_001	Banana	nucleus	24.86	18.61
GSMUA_Achr3P00490_001	Banana	nucleus	21.82	18.49
GSMUA_Achr7P16020_001	Banana	nucleus	21.63	18.24
GSMUA_Achr7P04930_001	Banana	nucleus	20.3	18.04
GSMUA_Achr11P...	Banana	mitochondrion	22.77	17.86
GSMUA_Achr7P04020_001	Banana	cytosol	23.72	17.86
GSMUA_Achr11P...	Banana	cytosol	22.39	17.72
GSMUA_Achr9P05210_001	Banana	nucleus	21.63	17.65
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	21.63	17.3
GSMUA_Achr9P08510_001	Banana	nucleus	22.96	15.47
GSMUA_Achr3P19020_001	Banana	cytosol	21.44	13.7

Protein Annotations

EnsemblPlants:GSMUA_Achr1P26500_001	EnsemblPlants:GSMUA_Achr1T26500_001	EnsemblPlantsGene:GSMUA_Achr1G26500_001	InterPro:DUF630	InterPro:DUF632	ncoils:Coil
PANTHER:PTHR21450	PANTHER:PTHR21450:SF23	PFAM:PF04782	PFAM:PF04783	SEG:seg	UniParc:UPI0002969D9C
UniProt:M0S3A7	MapMan:35.1	:	:	:	:

Description

DUF630/DUF632 domains containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G26500_001]

Coordinates

chr1:-:22093523..22097991

Molecular Weight (calculated)

59756.8 Da

IEP (calculated)

9.244

GRAVY (calculated)

-0.492

Length

527 amino acids

Sequence
(BLAST)

001: MGCWHSRVER QEAVSRCKAR RRYMKQLVRG RRAFAAAHSL YLRSLRATGA ALLQFANAET HLHHQLPPIP WDFWDPFVPS SSRSATEEEW EEVTTTVSEV
101: TTAPAVGPPP SVVSGYSKDS ASELAMVVVP RGKKDLSEIV KELDDYFLKA AEAGSRVSFI LEAPLCDLSS NQDLAGKMHA YGKNLRHLHW SWRSNSKATG
201: GFTRFGRCRE EMGRGNGSGD GGVGSGHMSH TSTMEKLYAW EKKLYLEVKN AEMIREEHEK RMSLLRKQEA KGMDYVKVVK NKMEIERLES KMMVATQAIE
301: TTTSAIIKLR ESELSPQLLE LVTGLMGMWR SMYECHQVQT HIVQQLEYLN CALSTRPTSD MRRQAALQLE SEVENWHVAF CRLEWQLALD RVPDRVASEG
401: IKSFLTVVRA VVVQQTEEQK QKKRSEAAFK ELEKRVEQLS SLERKRGSLE SEKRAEVEAL KAKAEEERSK YEKSAGVTRA MTLNNLQTGL PHVFQAMTGF
501: SGVCMQAFES VYRVLDPKRL LLLPLGR

Best Arabidopsis Sequence Match ( AT3G51290.3 )
(BLAST)

001: MGCCQSRIDS KEIVSRCKAR KRYLKHLVKA RQTLSVSHAL YLRSLRAVGS SLVHFSSKET PLHLHHNPPS PSPPPPPPPR PPPPPLSPGS ETTTWTTTTT
101: SSVLPPPPPP PPPPPPPSST WDFWDPFIPP PPSSSEEEWE EETTTATRTA TGTGSDAAVT TAPTTATPQA SSVVSGFSKD TMTTTTTGSE LAVVVSRNGK
201: DLMEIIKEVD EYFLKAADSG APLSSLLEIS TSITDFSGHS KSGKMYSSSN YECNLNPTSF WTRGFAPSKL SEYRNAGGVI GGNCIVGSHS STVDRLYAWE
301: KKLYQEVKYA ESIKMDHEKK VEQVRRLEMK RAEYVKTEKA KKDVEKLESQ LSVSSQAIQS ASNEIIKLRE TELYPQLVEL VKGLMCMWRS MYESHQVQTH
401: IVQQLKYLNT IPSTEPTSEL HRQSTLQLEL EVQQWHHSFC NLVKAQRDYI QSLTGWLRLS LFQFSKNPLV RSSYESKIYS FCEEWHLAID RIPDKVASEG
501: IKSFLTAVHG IVAQQADEHK QKKRTESMLK DFEKKSASLR ALESKYSPYS VPESRKKNPV IEKRVKVEML KGKAEEEKSK HEKSVSVTRA MTLNNLQMGF
601: PHVFQAMVGF SSVCMQAFES VYNQAKSIGE DQEEVKRLLP

Arabidopsis Description

Pyridoxal-phosphate-dependent serine hydroxymethyltransferase, putative (DUF632) [Source:UniProtKB/TrEMBL;Acc:F4J3B2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.