Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P05210_001 | Banana | nucleus | 62.79 | 58.51 |
| TraesCS2A01G099100.1 | Wheat | nucleus | 37.87 | 41.99 |
| VIT_06s0009g01610.t01 | Wine grape | nucleus | 24.92 | 39.37 |
| KXG39486 | Sorghum | nucleus | 53.82 | 39.04 |
| Os03t0321500-01 | Rice | plasma membrane | 53.49 | 38.2 |
| AT2G27090.2 | Thale cress | nucleus | 46.84 | 37.95 |
| TraesCS4A01G128000.1 | Wheat | cytosol | 50.33 | 37.18 |
| CDY04477 | Canola | nucleus | 43.85 | 36.72 |
| TraesCS4D01G178500.1 | Wheat | cytosol | 49.5 | 36.65 |
| Bra012035.1-P | Field mustard | nucleus | 43.85 | 36.62 |
| TraesCS4B01G176800.1 | Wheat | cytosol | 49.34 | 36.53 |
| CDX71474 | Canola | nucleus | 43.19 | 36.16 |
| HORVU4Hr1G052040.1 | Barley | cytosol | 49.67 | 35.98 |
| KRH14687 | Soybean | nucleus | 46.68 | 35.89 |
| KRH73448 | Soybean | nucleus | 45.85 | 35.25 |
| Solyc09g007100.2.1 | Tomato | nucleus | 44.52 | 35.08 |
| KRG89850 | Soybean | nucleus | 45.68 | 35.08 |
| Os07t0686500-01 | Rice | endoplasmic reticulum | 41.03 | 34.59 |
| KRH18693 | Soybean | nucleus | 45.85 | 34.29 |
| PGSC0003DMT400005111 | Potato | nucleus | 43.69 | 34.2 |
| Zm00001d028960_P001 | Maize | nucleus | 50.0 | 34.09 |
| GSMUA_Achr2P22150_001 | Banana | cytosol | 33.22 | 33.9 |
| VIT_06s0009g01600.t01 | Wine grape | nucleus | 26.25 | 33.55 |
| GSMUA_Achr11P... | Banana | cytosol | 32.39 | 29.28 |
| GSMUA_Achr1P07380_001 | Banana | cytosol, nucleus, peroxisome | 24.42 | 26.82 |
| GSMUA_Achr8P34030_001 | Banana | cytosol | 26.08 | 26.34 |
| GSMUA_Achr7P16020_001 | Banana | nucleus | 23.26 | 22.4 |
| GSMUA_Achr3P00490_001 | Banana | nucleus | 22.76 | 22.03 |
| GSMUA_Achr1P26500_001 | Banana | cytosol | 19.1 | 21.82 |
| GSMUA_Achr1P17130_001 | Banana | nucleus | 20.93 | 20.76 |
| GSMUA_Achr11P... | Banana | cytosol | 22.26 | 20.3 |
| GSMUA_Achr3P14690_001 | Banana | nucleus | 23.59 | 20.17 |
| GSMUA_Achr11P... | Banana | mitochondrion | 22.26 | 19.94 |
| GSMUA_Achr3P24800_001 | Banana | nucleus | 19.77 | 19.73 |
| GSMUA_Achr7P04930_001 | Banana | nucleus | 19.44 | 19.73 |
| GSMUA_Achr1P18120_001 | Banana | cytosol | 22.26 | 19.71 |
| GSMUA_Achr3P00690_001 | Banana | nucleus | 16.28 | 19.33 |
| GSMUA_Achr7P04020_001 | Banana | cytosol | 21.59 | 18.57 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, nucleus | 20.27 | 18.51 |
| GSMUA_Achr9P30410_001 | Banana | cytosol | 17.94 | 17.56 |
| GSMUA_Achr5P00570_001 | Banana | cytosol | 19.44 | 17.52 |
| GSMUA_Achr3P22040_001 | Banana | cytosol | 19.77 | 17.35 |
| GSMUA_Achr11P... | Banana | nucleus | 20.6 | 17.15 |
| GSMUA_Achr8P10940_001 | Banana | nucleus | 20.43 | 16.71 |
| GSMUA_Achr9P08510_001 | Banana | nucleus | 21.43 | 16.5 |
| GSMUA_Achr4P21640_001 | Banana | nucleus | 18.94 | 16.29 |
| GSMUA_Achr3P19020_001 | Banana | cytosol | 21.76 | 15.88 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P32100_001 | EnsemblPlants:GSMUA_Achr6T32100_001 | EnsemblPlantsGene:GSMUA_Achr6G32100_001 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil |
| PANTHER:PTHR21450 | PANTHER:PTHR21450:SF6 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | UniParc:UPI000295F59C |
| UniProt:M0TC05 | MapMan:35.1 | : | : | : | : |
Description
DUF630/DUF632 domains containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G32100_001]
Coordinates
chr6:-:31621847..31627700
Molecular Weight (calculated)
67640.6 Da
IEP (calculated)
6.155
GRAVY (calculated)
-0.548
Length
602 amino acids
Sequence
(BLAST)
(BLAST)
001: MGATNSRIEE DKALTLCRER KRLVRQALDE RCSLAAAHVS YIRSLRETGI ALREFVETEA PNESSLFTTT SATPEPLALT DTPKHILSFQ NGRGLNQDGD
101: RASTNEENDL DSEDDFDHPS SEPLLTNDIS ETDEMTPTKA ASYIVSISMN GKGKETDPET KNEARDLLSC MLEIADLFLK ASESGKEIPM MLEANKVQFR
201: PLFAEEKAHA SKVSAFIMSY FACCKEETPH PQVSATNEVK YLTWHSSVSS LSSSSRNFLG TTMKDDTEEP SSNLFNSICM NSGSHASTLD RLYAWERKLY
301: DEIKACGILR RDYGMKCRLL RHRESQGENR IKIDKSRAAV KDLHSRIHVA IQSIDSISKK IEGIRDKELQ PQLEELIGGL TKMWRTMLDY HNRQYNIIMS
401: VSDNGNTKVS VRSESQHQAA DLEFELNELS SNFTGWMSAH KSYVQAINGW LLKCIDSTVK QNKSSRRKAQ RFSLKIDLAP PIFVTCQNWL DLLEVLSTED
501: VVSAVKDLVN ATTHFLPHQE KGHGTSKSSF SLPRNDESGE HVLANDPSVD WSLNYDHLQS ALKIFLDSLK AFAASSVSKY EALQVSIKKA KELYEGKAEK
601: QV
101: RASTNEENDL DSEDDFDHPS SEPLLTNDIS ETDEMTPTKA ASYIVSISMN GKGKETDPET KNEARDLLSC MLEIADLFLK ASESGKEIPM MLEANKVQFR
201: PLFAEEKAHA SKVSAFIMSY FACCKEETPH PQVSATNEVK YLTWHSSVSS LSSSSRNFLG TTMKDDTEEP SSNLFNSICM NSGSHASTLD RLYAWERKLY
301: DEIKACGILR RDYGMKCRLL RHRESQGENR IKIDKSRAAV KDLHSRIHVA IQSIDSISKK IEGIRDKELQ PQLEELIGGL TKMWRTMLDY HNRQYNIIMS
401: VSDNGNTKVS VRSESQHQAA DLEFELNELS SNFTGWMSAH KSYVQAINGW LLKCIDSTVK QNKSSRRKAQ RFSLKIDLAP PIFVTCQNWL DLLEVLSTED
501: VVSAVKDLVN ATTHFLPHQE KGHGTSKSSF SLPRNDESGE HVLANDPSVD WSLNYDHLQS ALKIFLDSLK AFAASSVSKY EALQVSIKKA KELYEGKAEK
601: QV
001: MGASTSRIDE DKALQLCRER KKFVQQALDG RCLLAAAHVS YVQSLKSTGT ALRKFSETEV PVESSLYTST SATPEQPLAL IEKSVSHLSY SPPPASHSHH
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
Arabidopsis Description
At2g27090 [Source:UniProtKB/TrEMBL;Acc:Q9ZVD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.