CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89850	Soybean	nucleus	88.82	91.2
KRH73448	Soybean	nucleus	70.19	72.16
KRH14687	Soybean	nucleus	69.94	71.9
VIT_06s0009g01600.t01	Wine grape	nucleus	37.76	64.54
AT2G27090.2	Thale cress	nucleus	55.03	59.62
CDY04477	Canola	nucleus	52.42	58.69
Bra012035.1-P	Field mustard	nucleus	52.3	58.39
Solyc09g007100.2.1	Tomato	nucleus	54.66	57.59
PGSC0003DMT400005111	Potato	nucleus	54.91	57.48
CDX71474	Canola	nucleus	50.93	57.02
VIT_06s0009g01610.t01	Wine grape	nucleus	25.09	53.02
GSMUA_Achr9P05210_001	Banana	nucleus	37.39	46.59
GSMUA_Achr6P32100_001	Banana	cytosol	34.29	45.85
TraesCS4A01G128000.1	Wheat	cytosol	42.98	42.45
KXG39486	Sorghum	nucleus	43.73	42.41
TraesCS4D01G178500.1	Wheat	cytosol	42.61	42.19
TraesCS4B01G176800.1	Wheat	cytosol	42.48	42.07
HORVU4Hr1G052040.1	Barley	cytosol	42.86	41.52
Os03t0321500-01	Rice	plasma membrane	41.99	40.09
Zm00001d028960_P001	Maize	nucleus	41.86	38.17
TraesCS2A01G099100.1	Wheat	nucleus	25.47	37.75
Os07t0686500-01	Rice	endoplasmic reticulum	33.04	37.25
KRG97595	Soybean	cytosol	28.32	34.49
KRH43215	Soybean	nucleus	30.43	33.06
KRH59380	Soybean	nucleus	29.69	32.52
KRH28815	Soybean	cytosol	14.53	25.89
KRH19063	Soybean	nucleus	23.35	25.1
KRH02818	Soybean	nucleus	22.98	24.83
KRH37304	Soybean	nucleus	22.36	23.53
KRG90664	Soybean	cytosol	22.48	23.48
KRH12287	Soybean	nucleus	22.11	23.03
KRH76635	Soybean	cytosol	17.76	22.88
KRH36090	Soybean	nucleus	21.74	22.82
KRH74089	Soybean	cytosol	21.86	22.48
KRH14028	Soybean	cytosol	20.0	21.96
KRH60958	Soybean	cytosol	17.89	21.75
KRH51633	Soybean	cytosol	17.64	21.39
KRH53256	Soybean	cytosol	21.99	21.02
KRH64648	Soybean	cytosol	21.74	20.91
KRH12768	Soybean	cytosol	15.78	20.22
KRH62002	Soybean	cytosol	17.27	19.89
KRH09858	Soybean	nucleus	18.14	19.62
KRH52653	Soybean	cytosol	17.27	19.55
KRH23466	Soybean	nucleus	18.14	19.49
KRH37731	Soybean	nucleus	15.28	19.1
KRH01066	Soybean	nucleus	17.27	19.07
KRH08031	Soybean	cytosol	9.94	18.31
KRH40173	Soybean	nucleus	17.14	17.97
KRH66512	Soybean	nucleus	17.64	17.77
KRH28816	Soybean	cytosol	0.62	15.15

Protein Annotations

EMBL:ACUP02008118	EnsemblPlants:KRH18693	EnsemblPlantsGene:GLYMA_13G076600	EntrezGene:100779418	InterPro:DUF630	InterPro:DUF632
PANTHER:PTHR21450	PANTHER:PTHR21450:SF6	PFAM:PF04782	PFAM:PF04783	ProteinID:KRH18693	ProteinID:KRH18693.1
SEG:seg	UniParc:UPI00023D0E7D	UniProt:K7LX74	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr13:+:18081357..18088510

Molecular Weight (calculated)

91035.6 Da

IEP (calculated)

6.799

GRAVY (calculated)

-0.750

Length

805 amino acids

Sequence
(BLAST)

001: MGASSSKMDD DKALQLCRER KKFVKQALDG RCSLAASHFS YVQSLKSTGT ALRRFMEPEA PMESSLDTST NATPEPLDKS LSQFSLSSPS VSRHTDAAET
101: FSPTPSPPSS SKFQANHMKF SSSSSKKVEE KPPVPVIGTV TSSGTPHNAA PHPTEKFEKS AFEVSSLPVE TPPWDFFGLF HPIDHQFSFQ EGKAMHQDMV
201: GNADDISRLR EEEGIPDLED DEKVSSHGRE DSMDSEDEFD DEPATDTLVQ RFENFNRVND HIKANALPAT DKPSKGDSAS EVELVNGEKG NSPVVSPLKT
301: ASTEVSHLTV TDKTKEKENH SEKVVPKHFF SSMKDIEFLF VKASESGKEV PRMLEANKLH FRPLFPAKEN CSLAPSFLKA CFSCGEDPSK LPEEPAQNSV
401: KYLTWHRTMS SRSYSSTNPP GANSRADVED VTNNLFDNFC MISGSHASTL DRLYAWERKL YDEVKASDMI RKEYDMKCKF LRNLESKGEK TSRIDKTRAV
501: VKDLHSGIRI TILRIDSISK RIEELRDKEL QPQLEELIDG LSRMWEVMFE CHKLQFQIMS TVYNNSHARI ATHSELRRQI TSYLESELHF LSSSFTKWIG
601: AQKFYLEAIN GWLHKCVSLK QKPGKKKRPQ RPLLRMYGPP IYATCEIWLE KLGELPIQDV VDSMKSLAGE IARFLPRQEK NHSKGANQPH ITSWNAHIRS
701: ESSDNLLRDD TLEDWDSGFD QFRASFLGFL AQLNNFSRSS VMMYTDLRQA IQIAKKNYHQ RSNSQAQDGQ WNSHSPDENP KSQSLDDNFK SQSKVANSEK
801: KSPKQ

Best Arabidopsis Sequence Match ( AT2G27090.2 )
(BLAST)

001: MGASTSRIDE DKALQLCRER KKFVQQALDG RCLLAAAHVS YVQSLKSTGT ALRKFSETEV PVESSLYTST SATPEQPLAL IEKSVSHLSY SPPPASHSHH
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK

Arabidopsis Description

At2g27090 [Source:UniProtKB/TrEMBL;Acc:Q9ZVD1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.