CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12287	Soybean	nucleus	94.77	93.79
KRH19063	Soybean	nucleus	72.16	73.7
KRH02818	Soybean	nucleus	70.85	72.75
VIT_11s0103g00310.t01	Wine grape	nucleus	65.1	64.93
PGSC0003DMT400015690	Potato	nucleus	62.35	62.43
Solyc07g047830.2.1	Tomato	nucleus	62.09	62.25
CDY66508	Canola	cytosol, nucleus	33.07	59.81
CDY28162	Canola	cytosol	31.11	58.91
CDY28161	Canola	nucleus	15.56	58.05
AT4G30130.3	Thale cress	nucleus	52.94	55.86
Bra011166.1-P	Field mustard	nucleus	47.84	55.2
CDX68628	Canola	nucleus	48.24	54.59
CDX82615	Canola	nucleus	50.72	51.46
CDY39136	Canola	nucleus	50.59	51.39
AT2G19090.1	Thale cress	nucleus	54.38	51.11
Bra038839.1-P	Field mustard	nucleus	52.16	50.76
GSMUA_Achr7P16020_001	Banana	nucleus	41.18	50.4
Bra038563.1-P	Field mustard	nucleus	53.2	50.19
Zm00001d012496_P001	Maize	nucleus	22.75	46.4
Zm00001d046842_P001	Maize	nucleus	24.58	46.31
Zm00001d046839_P001	Maize	nucleus	24.58	46.31
GSMUA_Achr3P00490_001	Banana	nucleus	37.65	46.3
GSMUA_Achr7P04930_001	Banana	nucleus	35.69	46.04
Zm00001d013369_P001	Maize	nucleus	31.9	40.2
OQU80872	Sorghum	nucleus	41.7	40.08
Zm00001d049762_P007	Maize	nucleus	41.44	39.77
Zm00001d031530_P006	Maize	nucleus	40.91	39.72
HORVU0Hr1G015650.2	Barley	cytosol, nucleus	20.52	35.52
Os02t0175301-00	Rice	nucleus	17.39	35.47
TraesCS6B01G182400.1	Wheat	cytosol	29.02	35.46
TraesCS7B01G137800.1	Wheat	nucleus	40.13	35.41
TraesCS6A01G154500.2	Wheat	cytosol	29.15	35.34
TraesCS6D01G144300.1	Wheat	cytosol	29.15	35.23
EES06355	Sorghum	cytosol	27.84	34.75
Zm00001d053766_P001	Maize	cytosol	28.24	34.56
TraesCS7A01G252800.1	Wheat	nucleus	37.65	33.64
TraesCS7D01G251500.1	Wheat	cytosol	39.74	33.59
Os02t0175200-00	Rice	cytosol, mitochondrion	13.33	32.38
HORVU7Hr1G052210.21	Barley	cytosol	35.29	32.1
KRH28815	Soybean	cytosol	16.73	28.32
KRG97595	Soybean	cytosol	21.96	25.42
KRG90664	Soybean	cytosol	25.36	25.16
KRH14687	Soybean	nucleus	25.1	24.52
KRH74089	Soybean	cytosol	25.1	24.52
KRH14028	Soybean	cytosol	23.4	24.42
KRH73448	Soybean	nucleus	24.97	24.39
KRH36090	Soybean	nucleus	24.44	24.38
KRH76635	Soybean	cytosol	19.35	23.68
KRH64648	Soybean	cytosol	25.62	23.42
KRH60958	Soybean	cytosol	20.26	23.41
KRG89850	Soybean	nucleus	23.66	23.09
KRH53256	Soybean	cytosol	25.23	22.92
KRH59380	Soybean	nucleus	21.57	22.45
KRH51633	Soybean	cytosol	19.48	22.44
KRH43215	Soybean	nucleus	21.7	22.4
KRH18693	Soybean	nucleus	23.53	22.36
KRH52653	Soybean	cytosol	19.35	20.82
KRH62002	Soybean	cytosol	18.56	20.31
KRH09858	Soybean	nucleus	19.09	19.62
KRH08031	Soybean	cytosol	10.98	19.22
KRH23466	Soybean	nucleus	18.56	18.96
KRH12768	Soybean	cytosol	15.16	18.47
KRH01066	Soybean	nucleus	16.99	17.83
KRH66512	Soybean	nucleus	18.56	17.77
KRH37731	Soybean	nucleus	14.51	17.24
KRH40173	Soybean	nucleus	17.25	17.19
KRH28816	Soybean	cytosol	0.39	9.09

Protein Annotations

EMBL:ACUP02005437	EnsemblPlants:KRH37304	EnsemblPlantsGene:GLYMA_09G058000	EntrezGene:100775759	InterPro:DUF630	InterPro:DUF632
ncoils:Coil	PANTHER:PTHR21450	PANTHER:PTHR21450:SF3	PFAM:PF04782	PFAM:PF04783	ProteinID:KRH37304
ProteinID:KRH37304.1	ProteinID:KRH37305.1	ProteinID:KRH37306.1	ProteinID:KRH37307.1	SEG:seg	UniParc:UPI000233CC1A
UniProt:K7LC11	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:5273509..5279284

Molecular Weight (calculated)

85885.0 Da

IEP (calculated)

4.844

GRAVY (calculated)

-0.657

Length

765 amino acids

Sequence
(BLAST)

001: MGCSHSRLDD EEAVRLCKDR KKFIRQAVEQ RTQFATGHIA YIESLKRVSA ALRNYIEGDE PREFSLDTVI TPPFTPVKRK TGSGFIPISA KPFATTGAIE
101: FGIGPNSTLK VNYLRPGGNP AISVEERPQS PERVQVETYY GIDGFFNMQS SPVNPSIFAY SPNNRTTIPP PSPHSQWDFF WNPFSSLDSY GYPSGGSIEQ
201: TAMDDEYRGL RQVREEEGIP DLEEDETEHE DCVGKRNVAE ERTRHDINSS KEVIVEDFND DDDEEEEEEE EEEEETDIED ETETEHNAKD SQAHGSASFE
301: VSKAEAAGHI ESRHREMTIG KQEAVEDTPG FTVYVNRRPT SMAEVINDLE TQFTVVCNAA NDVSALLEAK KSQYLLTSNE LSASKLLNPV ALLRSASSRS
401: SSSRFLVNCS STSAEGCGEG TKDLSAEHCM LSGSHHATLD RLNTWEKKLY EEVRSGERVR IAYEKKCKQL RNLDVKGEDP SCADKTRAAI RELDTQITVS
501: IHSIEAISRR IETLRDKELH PQLLELVQGL ERMWKVMAEC HQTQKRTLDE AKILLAGTPS KSRARKQSSI SMTDPNRLAR SASNLEFELR NWRNAFESWI
601: TSQRSYIHAL TGWLLRCMRF EPDVSKLPCS PRRSSSTHPL FGLCVQWSRR LDAIQEKAVL DGLDFFAAGM GSLYAHQLRE DSRRNSFGSK QSNGNMEMVE
701: VGEVEEVMAP EKLAEVAIKV LCAGMSVAIS SLAEFALDSS EGYNEVVKQW DNGKCQNTTS SETRT

Best Arabidopsis Sequence Match ( AT2G19090.1 )
(BLAST)

001: MGCSHSKLDD EEAVQICKDR KRFIKQAIEH RTKFASGHIA YIHSLRKVSD ALHDFILQGD NNNEFVPTLC QDSFVTPVKR MPQRRRRSSR SNSGEFISIS
101: PSSIPPKMIQ GRPRSNVKAN YLMANRSRPV RVEQRSPETF RVETFSPPSS SNQYGESDGF FGMNMNMNTS ASTSSSFWNP LSSPEQRLSS HNIPPPSPQN
201: SQWDFFWNPF SSLDYYGYNS YDRGSVDSRS GIDDEIRGLR RVREEEGIPD LEEDDEPHKP EPVVNVRFQN HNPNPKATEE NRGKVDKSCC NEEVKVEDVD
301: EDEDEDGDED DDEFTDSGCE TENEGDEKCV APPTQEQRKA EVCRGGEATG NVVGVGKVQE MKNVVGVRDD AKTTGFTVYV NRRPTSMAEV IKDLEDQFTT
401: ICDAAKEVSG LLEAGRAQYT SSFNDHSARK MLNPVALFRS GSSRSSSSRF LITSSGGSRE SGSESRSDVS DESCMISGSH QTTLDRLFAW EKKLYDEVRS
501: GERVRRAYEK KCMQLRNQDV KGDDPLAVDK TRATIRDLDT QIKVSIHSIE SISKRIETLR DQELLPQLLE LVEGLTRMWK VMAESHQIQK RTLDEAKLLL
601: AGTPVSKRHK KRQPPIMPEA INSQRLAQSA LNLEAQLRNW RTCFEFWITS QRSYMKALSG WLLRCFRCDP DPEKVRLSSC LHPIYRVCIQ WSRLLNSLNE
701: KPVLDKLEFF ASGMGSIYAR QVREDPNWSG SGSRRYSGSE SMELVVADKG EEDVVMTAEK LAEVAVKVLC HGMSVAVSSL AEFSINSADE HSKLVSQPAD
801: DASEQQPPDV NFNS

Arabidopsis Description

Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G19090]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.