Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28162 | Canola | cytosol | 57.84 | 96.78 |
| Bra011166.1-P | Field mustard | nucleus | 92.75 | 94.57 |
| CDY28161 | Canola | nucleus | 27.37 | 90.24 |
| AT4G30130.3 | Thale cress | nucleus | 78.55 | 73.24 |
| CDY66508 | Canola | cytosol, nucleus | 42.75 | 68.32 |
| CDX82615 | Canola | nucleus | 66.27 | 59.42 |
| CDY39136 | Canola | nucleus | 66.12 | 59.36 |
| VIT_11s0103g00310.t01 | Wine grape | nucleus | 57.69 | 50.85 |
| KRH19063 | Soybean | nucleus | 55.47 | 50.07 |
| KRH02818 | Soybean | nucleus | 54.14 | 49.13 |
| KRH37304 | Soybean | nucleus | 54.59 | 48.24 |
| PGSC0003DMT400015690 | Potato | nucleus | 54.29 | 48.04 |
| Solyc07g047830.2.1 | Tomato | nucleus | 54.14 | 47.97 |
| KRH12287 | Soybean | nucleus | 54.73 | 47.87 |
| GSMUA_Achr7P16020_001 | Banana | nucleus | 43.49 | 47.04 |
| GSMUA_Achr3P00490_001 | Banana | nucleus | 38.61 | 41.96 |
| GSMUA_Achr7P04930_001 | Banana | nucleus | 36.54 | 41.65 |
| Zm00001d046839_P001 | Maize | nucleus | 25.0 | 41.63 |
| Zm00001d046842_P001 | Maize | nucleus | 25.0 | 41.63 |
| Zm00001d012496_P001 | Maize | nucleus | 22.49 | 40.53 |
| Zm00001d013369_P001 | Maize | nucleus | 32.1 | 35.75 |
| Zm00001d031530_P006 | Maize | nucleus | 40.83 | 35.03 |
| OQU80872 | Sorghum | nucleus | 41.12 | 34.92 |
| Zm00001d049762_P007 | Maize | nucleus | 41.12 | 34.88 |
| HORVU0Hr1G015650.2 | Barley | cytosol, nucleus | 20.86 | 31.9 |
| TraesCS7B01G137800.1 | Wheat | nucleus | 40.53 | 31.6 |
| EES06355 | Sorghum | cytosol | 28.25 | 31.16 |
| TraesCS6B01G182400.1 | Wheat | cytosol | 28.7 | 30.99 |
| Os02t0175301-00 | Rice | nucleus | 17.16 | 30.93 |
| TraesCS7D01G251500.1 | Wheat | cytosol | 40.98 | 30.61 |
| TraesCS7A01G252800.1 | Wheat | nucleus | 38.46 | 30.37 |
| TraesCS6D01G144300.1 | Wheat | cytosol | 28.4 | 30.33 |
| TraesCS6A01G154500.2 | Wheat | cytosol | 28.25 | 30.27 |
| Zm00001d053766_P001 | Maize | cytosol | 27.96 | 30.24 |
| HORVU7Hr1G052210.21 | Barley | cytosol | 36.98 | 29.73 |
| Os02t0175200-00 | Rice | cytosol, mitochondrion | 13.02 | 27.94 |
| CDX69386 | Canola | nucleus | 22.93 | 25.66 |
| CDY42005 | Canola | nucleus | 23.08 | 25.49 |
| CDY17530 | Canola | cytosol | 24.85 | 23.66 |
| CDX87081 | Canola | nucleus | 18.64 | 23.6 |
| CDX76322 | Canola | cytosol | 24.56 | 23.48 |
| CDX88008 | Canola | nucleus | 24.7 | 23.36 |
| CDX71474 | Canola | nucleus | 24.11 | 22.67 |
| CDY04477 | Canola | nucleus | 24.11 | 22.67 |
| CDY31475 | Canola | nucleus | 19.97 | 22.43 |
| CDY07877 | Canola | cytosol | 23.52 | 22.24 |
| CDX75484 | Canola | cytosol, plastid | 22.19 | 21.52 |
| CDX77992 | Canola | nucleus | 19.97 | 21.46 |
| CDX69122 | Canola | nucleus | 23.82 | 21.44 |
| CDX73734 | Canola | nucleus | 20.12 | 21.25 |
| CDX88372 | Canola | nucleus | 24.26 | 19.85 |
| CDY04672 | Canola | nucleus | 25.59 | 19.84 |
| CDY08177 | Canola | nucleus | 26.04 | 19.75 |
| CDX83412 | Canola | nucleus | 19.38 | 19.47 |
| CDY41788 | Canola | nucleus | 24.41 | 19.37 |
| CDX95620 | Canola | nucleus | 19.67 | 19.14 |
| CDX84637 | Canola | cytosol | 18.64 | 18.78 |
| CDX88193 | Canola | nucleus | 20.12 | 18.45 |
| CDY41178 | Canola | nucleus | 19.67 | 18.45 |
| CDX80528 | Canola | nucleus | 19.97 | 18.42 |
| CDY56992 | Canola | nucleus | 19.67 | 18.29 |
| CDY42691 | Canola | nucleus | 19.53 | 18.26 |
| CDX71821 | Canola | nucleus | 18.93 | 18.03 |
| CDY42454 | Canola | cytosol | 18.64 | 17.97 |
| CDX79570 | Canola | cytosol | 18.2 | 17.85 |
| CDY18335 | Canola | cytosol | 18.49 | 17.68 |
| CDY61085 | Canola | nucleus | 18.49 | 16.76 |
| CDY52975 | Canola | nucleus | 18.34 | 16.6 |
| CDX87516 | Canola | nucleus | 10.8 | 16.22 |
| CDY29526 | Canola | peroxisome | 20.41 | 12.01 |
Protein Annotations
| EnsemblPlants:CDX68628 | EnsemblPlantsGene:GSBRNA2T00130274001 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF3 | PFAM:PF04782 | PFAM:PF04783 | ProteinID:CDX68628 | ProteinID:CDX68628.1 | SEG:seg |
| UniParc:UPI0004EDB3F4 | MapMan:35.1 | : | : | : | : |
Description
BnaC01g08250D
Coordinates
chrLK031789:+:283079..285459
Molecular Weight (calculated)
76715.0 Da
IEP (calculated)
4.929
GRAVY (calculated)
-0.623
Length
676 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCSNSKLGE DEAVQICRDR KRFIKEAVEH RTSFASAHIA YIHSLRKVSD ALREYIEGDE PHEFPLDTFV TPVKRMTSSD GFIELSQSKV ESKLEVSYLM
101: ASGTRPVQVE EKPPRSPETY HVETYGADSF LGMNMNMNSP AAHNNSSSIP PPSPQNSQWD FFWNPFSSLD YYGYNYDNRR GMEDEVRRVR EEEGIPDLEE
201: DESSPRFQDH HNIMKATEDC KTDQEGNVSE VETQEQEQGN NVVTRGDAKG EETQGFTVYL TRRPTSMGEV IKDLEDQFEI ICSAANEVSG LLEAGRAQYI
301: SSNSELSAMK MLNPVSLFSS RSSSSSSRFL ITSESSSSEF SEESCMLSGS HQSTLDRLYA WEKKLYDEVK SGERVRIAYE KKCSALRNHD VKGDNSSSVD
401: KTRATMRDLH TQMMVSIHSI ESISERIETL RDQELLPQLL ELLQGLAGMW KVMAECHQIQ TRTLDEAKRL FAATMLKKRQ QSSLPEVNTQ RLARSALNLV
501: AQLRNWRVCF QAWITSQRSY VLSLTGWLLR CFRCDPDPEK VRLTTCPHRI YEVCIGWSRL LNGLNEKPVV DKLDFFACGM GSIFARQLRE EDQSQGRDGS
601: RSMELVEADK VEEEEERMMN AEKLAEIAVK VLCHGMCVAV SSLAEFAISS ADEHSKLVNH PEEATSEQQH QEQTGM
101: ASGTRPVQVE EKPPRSPETY HVETYGADSF LGMNMNMNSP AAHNNSSSIP PPSPQNSQWD FFWNPFSSLD YYGYNYDNRR GMEDEVRRVR EEEGIPDLEE
201: DESSPRFQDH HNIMKATEDC KTDQEGNVSE VETQEQEQGN NVVTRGDAKG EETQGFTVYL TRRPTSMGEV IKDLEDQFEI ICSAANEVSG LLEAGRAQYI
301: SSNSELSAMK MLNPVSLFSS RSSSSSSRFL ITSESSSSEF SEESCMLSGS HQSTLDRLYA WEKKLYDEVK SGERVRIAYE KKCSALRNHD VKGDNSSSVD
401: KTRATMRDLH TQMMVSIHSI ESISERIETL RDQELLPQLL ELLQGLAGMW KVMAECHQIQ TRTLDEAKRL FAATMLKKRQ QSSLPEVNTQ RLARSALNLV
501: AQLRNWRVCF QAWITSQRSY VLSLTGWLLR CFRCDPDPEK VRLTTCPHRI YEVCIGWSRL LNGLNEKPVV DKLDFFACGM GSIFARQLRE EDQSQGRDGS
601: RSMELVEADK VEEEEERMMN AEKLAEIAVK VLCHGMCVAV SSLAEFAISS ADEHSKLVNH PEEATSEQQH QEQTGM
001: MGCSHSKFDD DEAVQICKDR KRFIKQAVEH RTGFASGHIA YIQSLRKVSD ALREYIEGDE PHEFMLDTCV TPVKRMSSSG GFIEISPPSK MVQSEAESKL
101: NVNSYLMASG SRPVRVEEKP PRSPETFQVE TYGADSFFGM NMNMNSPGLG SHNIPPPSPQ NSQWDFFWNP FSALDQYGYS YDNQNGMDDD MRRLRRVREE
201: EGIPDLEEDE YVKFEDHHNM KATEDFNGGK MYQEDKVEHV NEEFTDSGCK IENESDKNCN GTQERRSLEV SRGGTTGHVV GVTSDDGKGE TPGFTVYLNR
301: RPTSMAEVIK DLEDQFAIIC TAGKEVSGLL EASRVQYTSS NELSAMTMLN PVALFRSGGS SRSSSSSRFL ISSSGGSRAS EFESSSEFSE ESCMLSGSHQ
401: STLDRLYAWE KKLYDEVKSG DRIRIAYEKK CLVLRNQDVK GADSSAVDKT RATIRDLHTQ IKVSIHSIES ISERIETLRD QELLPQLLEL VQGLAQMWKV
501: MAECHQIQKR TLDEAKLLLA TTPSNRHKKQ QQTSLPEINS QRLARSALHL VVQLRNWRAC FQAWITSQRS YILSLTGWLL RCFRCDPDPE KVTLTSCPHP
601: IYEVCIQWSR LLNGLNEKPV LDKLDFFASG MGAIYARQLK EDTSPVTDSS RKYSRPESME LVEAEKVEEE KIMTAEKLAE IAVKVLCHGM SVAVSSLAEF
701: SISSADEHSK LVTHREEDMP EQTKI
101: NVNSYLMASG SRPVRVEEKP PRSPETFQVE TYGADSFFGM NMNMNSPGLG SHNIPPPSPQ NSQWDFFWNP FSALDQYGYS YDNQNGMDDD MRRLRRVREE
201: EGIPDLEEDE YVKFEDHHNM KATEDFNGGK MYQEDKVEHV NEEFTDSGCK IENESDKNCN GTQERRSLEV SRGGTTGHVV GVTSDDGKGE TPGFTVYLNR
301: RPTSMAEVIK DLEDQFAIIC TAGKEVSGLL EASRVQYTSS NELSAMTMLN PVALFRSGGS SRSSSSSRFL ISSSGGSRAS EFESSSEFSE ESCMLSGSHQ
401: STLDRLYAWE KKLYDEVKSG DRIRIAYEKK CLVLRNQDVK GADSSAVDKT RATIRDLHTQ IKVSIHSIES ISERIETLRD QELLPQLLEL VQGLAQMWKV
501: MAECHQIQKR TLDEAKLLLA TTPSNRHKKQ QQTSLPEINS QRLARSALHL VVQLRNWRAC FQAWITSQRS YILSLTGWLL RCFRCDPDPE KVTLTSCPHP
601: IYEVCIQWSR LLNGLNEKPV LDKLDFFASG MGAIYARQLK EDTSPVTDSS RKYSRPESME LVEAEKVEEE KIMTAEKLAE IAVKVLCHGM SVAVSSLAEF
701: SISSADEHSK LVTHREEDMP EQTKI
Arabidopsis Description
DUF630 family protein (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q9SZW6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.