Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88008 | Canola | nucleus | 90.63 | 90.63 |
| AT2G17110.1 | Thale cress | nucleus | 72.73 | 70.94 |
| CDX76322 | Canola | cytosol | 63.64 | 64.36 |
| CDY17530 | Canola | cytosol | 63.08 | 63.52 |
| CDX75484 | Canola | cytosol, plastid | 59.02 | 60.55 |
| CDX69122 | Canola | nucleus | 61.96 | 58.99 |
| KRH14028 | Soybean | cytosol | 51.47 | 50.2 |
| KRH74089 | Soybean | cytosol | 54.27 | 49.55 |
| PGSC0003DMT400043330 | Potato | mitochondrion | 51.33 | 45.48 |
| Solyc10g074470.1.1 | Tomato | cytosol | 50.91 | 45.33 |
| VIT_03s0038g03260.t01 | Wine grape | cytosol | 50.49 | 44.46 |
| Os02t0669900-01 | Rice | cytosol | 25.59 | 42.86 |
| Solyc01g112050.2.1 | Tomato | nucleus | 52.87 | 42.47 |
| PGSC0003DMT400048013 | Potato | nucleus | 53.01 | 41.51 |
| HORVU2Hr1G096140.2 | Barley | cytosol | 20.7 | 39.57 |
| GSMUA_Achr11P... | Banana | mitochondrion | 35.38 | 37.65 |
| GSMUA_Achr3P14690_001 | Banana | nucleus | 36.5 | 37.07 |
| Os04t0562800-00 | Rice | cytosol, mitochondrion | 27.69 | 36.13 |
| GSMUA_Achr1P18120_001 | Banana | cytosol | 33.71 | 35.44 |
| OQU85656 | Sorghum | cytosol | 37.9 | 35.38 |
| Zm00001d017553_P001 | Maize | cytosol | 36.92 | 35.06 |
| GSMUA_Achr7P04020_001 | Banana | cytosol | 34.27 | 35.0 |
| TraesCS6D01G235200.1 | Wheat | nucleus | 36.08 | 33.81 |
| HORVU6Hr1G064670.13 | Barley | nucleus | 35.8 | 33.68 |
| TraesCS6A01G253600.1 | Wheat | nucleus | 35.94 | 33.68 |
| TraesCS6B01G271800.1 | Wheat | nucleus | 35.8 | 33.6 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, nucleus | 30.63 | 33.23 |
| KXG26898 | Sorghum | cytosol | 35.8 | 32.28 |
| HORVU2Hr1G096180.1 | Barley | cytosol | 27.55 | 32.19 |
| TraesCS2A01G405700.1 | Wheat | cytosol | 34.13 | 32.06 |
| TraesCS2B01G423500.1 | Wheat | cytosol | 34.27 | 31.98 |
| TraesCS2D01G402400.1 | Wheat | cytosol | 33.85 | 31.88 |
| Zm00001d002669_P002 | Maize | cytosol | 35.1 | 31.81 |
| HORVU7Hr1G057760.4 | Barley | cytosol | 28.95 | 31.6 |
| Zm00001d026130_P001 | Maize | nucleus | 34.83 | 31.56 |
| Os08t0551200-00 | Rice | cytosol | 35.38 | 31.23 |
| Os09t0547300-01 | Rice | nucleus | 39.72 | 30.9 |
| EER97130 | Sorghum | nucleus | 38.88 | 30.45 |
| CDY31475 | Canola | nucleus | 25.45 | 30.23 |
| Zm00001d006286_P001 | Maize | nucleus | 38.32 | 29.98 |
| TraesCS7D01G273600.1 | Wheat | cytosol | 33.85 | 29.88 |
| CDX88372 | Canola | nucleus | 34.41 | 29.78 |
| Zm00001d021452_P001 | Maize | nucleus | 39.02 | 29.65 |
| CDY41788 | Canola | nucleus | 34.83 | 29.23 |
| TraesCS5B01G348100.1 | Wheat | nucleus | 39.16 | 29.17 |
| HORVU5Hr1G086500.2 | Barley | nucleus | 39.3 | 29.03 |
| TraesCS7B01G171500.1 | Wheat | cytosol | 32.31 | 28.95 |
| TraesCS5D01G353500.1 | Wheat | nucleus | 39.02 | 28.94 |
| TraesCS5A01G347200.1 | Wheat | nucleus | 38.74 | 28.88 |
| CDY04672 | Canola | nucleus | 34.69 | 28.44 |
| CDY08177 | Canola | nucleus | 35.24 | 28.28 |
| CDY28161 | Canola | nucleus | 7.69 | 26.83 |
| TraesCS7A01G273600.1 | Wheat | cytosol, mitochondrion, nucleus | 33.57 | 25.59 |
| CDY28162 | Canola | cytosol | 14.41 | 25.5 |
| CDY66508 | Canola | cytosol, nucleus | 14.27 | 24.11 |
| CDX69386 | Canola | nucleus | 20.28 | 24.01 |
| CDX68628 | Canola | nucleus | 22.24 | 23.52 |
| CDY42005 | Canola | nucleus | 20.0 | 23.37 |
| CDX87516 | Canola | nucleus | 14.69 | 23.33 |
| CDY42454 | Canola | cytosol | 22.66 | 23.11 |
| CDY18335 | Canola | cytosol | 22.52 | 22.77 |
| CDX82615 | Canola | nucleus | 23.78 | 22.55 |
| CDY39136 | Canola | nucleus | 23.64 | 22.44 |
| CDX77992 | Canola | nucleus | 18.74 | 21.3 |
| CDX73734 | Canola | nucleus | 18.88 | 21.09 |
| CDY04477 | Canola | nucleus | 20.56 | 20.45 |
| CDX87081 | Canola | nucleus | 15.24 | 20.41 |
| CDX71474 | Canola | nucleus | 19.86 | 19.75 |
| CDX83412 | Canola | nucleus | 18.32 | 19.47 |
| CDY56992 | Canola | nucleus | 18.46 | 18.16 |
| CDX95620 | Canola | nucleus | 17.62 | 18.13 |
| CDY42691 | Canola | nucleus | 18.32 | 18.12 |
| CDX84637 | Canola | cytosol | 16.78 | 17.88 |
| CDX71821 | Canola | nucleus | 17.62 | 17.75 |
| CDY41178 | Canola | nucleus | 17.48 | 17.34 |
| CDX79570 | Canola | cytosol | 16.5 | 17.13 |
| CDX80528 | Canola | nucleus | 17.48 | 17.05 |
| CDX88193 | Canola | nucleus | 17.48 | 16.96 |
| CDY61085 | Canola | nucleus | 17.06 | 16.35 |
| CDY52975 | Canola | nucleus | 17.06 | 16.33 |
| CDY29526 | Canola | peroxisome | 25.45 | 15.84 |
Protein Annotations
| EnsemblPlants:CDY07877 | EnsemblPlantsGene:GSBRNA2T00125051001 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF2 | PFAM:PF04782 | PFAM:PF04783 | ProteinID:CDY07877 | ProteinID:CDY07877.1 | SEG:seg |
| UniParc:UPI0004EDB2B7 | UniProt:A0A078F469 | MapMan:35.1 | : | : | : |
Description
BnaC03g47450DBnaC03g47450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F469]
Coordinates
chrLK031981:+:710703..713543
Molecular Weight (calculated)
80259.2 Da
IEP (calculated)
5.341
GRAVY (calculated)
-0.665
Length
715 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCTTSKLDD LPAVALCLDR CGFLRTAIQQ RYALADSHLA HTQSLQGVAQ SLHTFIDHHH RFAGGDSHDP PEEDDDDSPQ LSGSGHIEFD SDSDEIDSLH
101: HSSPLHEDPD FTRYPNPDPP SSYLHMNYMK KSSMPPSVVY EQRPSSPQRV YFGESSASNY NNPYPSYGPS RTEGWDLLNL FDYAPYTLTQ DDDSREVREE
201: EGIPDLEDDF HGEVVKEVHG KQKLVVPVPA VSASAVDDKE EPPGDGGGGG QASLFQTRPS VAVEKEEKEY EVHVKKVVES SGGEEARRSD AAPRGSGVRR
301: GVPEIAKEIE AQFLRAAESG TEIAVMLEVG KQHPNARKHG AASSKMIQEV TPPPSVVPSS QPSTSKKAKA SSSAAAAPTY ADIEAELALR SRNLSSTLHK
401: LHLWEKKLYE EVKAEEKLRL LHERKLRKLK RMDERGTDAP KVDLTRRFVR SLSTKIRIAI QVVDKISVTI NKIRDEELWL QLNQLIQGLS RMWKSMLDCH
501: QSQCEAIKEA RGLGSIRASK KLPDDHLEAT RVLGHELINW ILRFSSWVNA QKCFVRGLNS WLMKCLIYEP EETPDGIVPF SPGRLGAPVI FVICNQWEQA
601: LDRISEKEVV EAMRRFTTSV LRLWEQDRLE TLERMIGHGG EEQRIQKEIQ ELESKMVLVG SGEDRSDTSN ESLQGSLRRI FEAMERFSAE SMRAYDDLLE
701: RAAKKESSSQ ESEED
101: HSSPLHEDPD FTRYPNPDPP SSYLHMNYMK KSSMPPSVVY EQRPSSPQRV YFGESSASNY NNPYPSYGPS RTEGWDLLNL FDYAPYTLTQ DDDSREVREE
201: EGIPDLEDDF HGEVVKEVHG KQKLVVPVPA VSASAVDDKE EPPGDGGGGG QASLFQTRPS VAVEKEEKEY EVHVKKVVES SGGEEARRSD AAPRGSGVRR
301: GVPEIAKEIE AQFLRAAESG TEIAVMLEVG KQHPNARKHG AASSKMIQEV TPPPSVVPSS QPSTSKKAKA SSSAAAAPTY ADIEAELALR SRNLSSTLHK
401: LHLWEKKLYE EVKAEEKLRL LHERKLRKLK RMDERGTDAP KVDLTRRFVR SLSTKIRIAI QVVDKISVTI NKIRDEELWL QLNQLIQGLS RMWKSMLDCH
501: QSQCEAIKEA RGLGSIRASK KLPDDHLEAT RVLGHELINW ILRFSSWVNA QKCFVRGLNS WLMKCLIYEP EETPDGIVPF SPGRLGAPVI FVICNQWEQA
601: LDRISEKEVV EAMRRFTTSV LRLWEQDRLE TLERMIGHGG EEQRIQKEIQ ELESKMVLVG SGEDRSDTSN ESLQGSLRRI FEAMERFSAE SMRAYDDLLE
701: RAAKKESSSQ ESEED
001: MGCSTSKLDD LPAVALCRDR CSFLEAAIHQ RYALSEAHVS YTQSLKAISH SLHQFINHHH RYNDSDSPKK AKPKMDSGSG HLDFDSDSDS DDDDDIDSLH
101: SSPLHHHLED DDSNPKSYLH MNYMKNSYMP PSLVYEQRPS SPQRVHFGES SSSSTSEYNP YLNSNYGSKL PPPPPSPPRE KVWDFLDPFD TYYTPYTPSR
201: DTRELRDELG VPDLEEDDVV VKEVHGKQKF VAAVSVEEPL GNSGASTSGG GGGGGKASLY QTRPSVSVEK EEMEHEVHIV EKKIVEDSGG DEVRKSKAAV
301: ARGGGGVRRG VPEVAKEIEA QFLRAAESGN EIAVMLEVGK HPYGRKNVSS KKLYEGTPSP SVVSSAQSST SKKAKAEASS SVTAPTYADI EAELALKSRN
401: LSSTLHKLHL WEKKLYDEVK AEEKMRVNHE KKLRKLKRMD ERGAENQKVD STRKLVRSLS TKIRIAIQVV DKISVTINKI RDEELWLQLN ELIQGLSKMW
501: KSMLECHKSQ CEAIKEARGL GPIRASKNFG GEHLEVTRTL GYELINWIVG FSSWVSAQKG FVRELNSWLM KCLFYEPEET PDGIVPFSPG RIGAPMIFVI
601: CNQWEQALDR ISEKEVIEAI RRFTTSVLHL WEQDRLATRE RIIGHGDPRN MDREEQRIQK EIQELEMKMV LVGPGEDNIV YQSDTSNESL QGSLQRIFEA
701: MERFTEESLK AYVDLLHRAE EEECDSRETD EED
101: SSPLHHHLED DDSNPKSYLH MNYMKNSYMP PSLVYEQRPS SPQRVHFGES SSSSTSEYNP YLNSNYGSKL PPPPPSPPRE KVWDFLDPFD TYYTPYTPSR
201: DTRELRDELG VPDLEEDDVV VKEVHGKQKF VAAVSVEEPL GNSGASTSGG GGGGGKASLY QTRPSVSVEK EEMEHEVHIV EKKIVEDSGG DEVRKSKAAV
301: ARGGGGVRRG VPEVAKEIEA QFLRAAESGN EIAVMLEVGK HPYGRKNVSS KKLYEGTPSP SVVSSAQSST SKKAKAEASS SVTAPTYADI EAELALKSRN
401: LSSTLHKLHL WEKKLYDEVK AEEKMRVNHE KKLRKLKRMD ERGAENQKVD STRKLVRSLS TKIRIAIQVV DKISVTINKI RDEELWLQLN ELIQGLSKMW
501: KSMLECHKSQ CEAIKEARGL GPIRASKNFG GEHLEVTRTL GYELINWIVG FSSWVSAQKG FVRELNSWLM KCLFYEPEET PDGIVPFSPG RIGAPMIFVI
601: CNQWEQALDR ISEKEVIEAI RRFTTSVLHL WEQDRLATRE RIIGHGDPRN MDREEQRIQK EIQELEMKMV LVGPGEDNIV YQSDTSNESL QGSLQRIFEA
701: MERFTEESLK AYVDLLHRAE EEECDSRETD EED
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G17110]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.