Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G353500.1 | Wheat | nucleus | 97.81 | 97.41 |
| TraesCS5A01G347200.1 | Wheat | nucleus | 96.98 | 97.08 |
| HORVU5Hr1G086500.2 | Barley | nucleus | 94.58 | 93.8 |
| Os09t0547300-01 | Rice | nucleus | 72.92 | 76.17 |
| EER97130 | Sorghum | nucleus | 72.29 | 76.01 |
| Zm00001d006286_P001 | Maize | nucleus | 71.98 | 75.6 |
| Zm00001d021452_P001 | Maize | nucleus | 71.67 | 73.11 |
| TraesCS7B01G171500.1 | Wheat | cytosol | 47.08 | 56.64 |
| GSMUA_Achr3P14690_001 | Banana | nucleus | 39.69 | 54.12 |
| GSMUA_Achr1P18120_001 | Banana | cytosol | 38.02 | 53.68 |
| GSMUA_Achr7P04020_001 | Banana | cytosol | 36.04 | 49.43 |
| PGSC0003DMT400043330 | Potato | mitochondrion | 35.52 | 42.26 |
| Solyc10g074470.1.1 | Tomato | cytosol | 35.1 | 41.97 |
| CDY17530 | Canola | cytosol | 30.73 | 41.55 |
| CDX76322 | Canola | cytosol | 30.52 | 41.44 |
| Bra009665.1-P | Field mustard | cytosol | 30.42 | 41.3 |
| CDX88008 | Canola | nucleus | 30.42 | 40.84 |
| VIT_03s0038g03260.t01 | Wine grape | cytosol | 34.48 | 40.76 |
| Bra020807.1-P | Field mustard | nucleus | 32.08 | 40.37 |
| Solyc01g112050.2.1 | Tomato | nucleus | 37.4 | 40.34 |
| PGSC0003DMT400048013 | Potato | nucleus | 38.02 | 39.98 |
| CDX69122 | Canola | nucleus | 31.04 | 39.68 |
| CDX75484 | Canola | cytosol, plastid | 28.75 | 39.6 |
| KRH14028 | Soybean | cytosol | 30.0 | 39.29 |
| CDY07877 | Canola | cytosol | 29.17 | 39.16 |
| AT2G17110.1 | Thale cress | nucleus | 29.9 | 39.15 |
| TraesCS6B01G271800.1 | Wheat | nucleus | 30.94 | 38.98 |
| KRH74089 | Soybean | cytosol | 31.56 | 38.7 |
| Bra011597.1-P | Field mustard | nucleus | 32.81 | 37.68 |
| AT4G35240.1 | Thale cress | nucleus | 33.85 | 37.57 |
| TraesCS2B01G423500.1 | Wheat | cytosol | 29.9 | 37.47 |
| KRH60958 | Soybean | cytosol | 23.65 | 34.29 |
| VIT_18s0001g00170.t01 | Wine grape | cytosol | 26.25 | 33.96 |
| KRH51633 | Soybean | cytosol | 23.12 | 33.43 |
| CDY31475 | Canola | nucleus | 19.06 | 30.4 |
| AT1G20530.1 | Thale cress | cytosol | 19.38 | 30.29 |
| TraesCS1B01G275500.1 | Wheat | nucleus | 25.42 | 27.39 |
| TraesCS5B01G335000.1 | Wheat | cytosol | 19.58 | 25.44 |
| TraesCS3B01G566500.1 | Wheat | plastid | 22.19 | 22.68 |
| TraesCS6B01G182400.1 | Wheat | cytosol | 14.58 | 22.36 |
| TraesCS3B01G240800.1 | Wheat | nucleus | 15.94 | 21.89 |
| TraesCS5B01G330400.1 | Wheat | nucleus | 14.27 | 20.45 |
| TraesCS7B01G137800.1 | Wheat | nucleus | 18.33 | 20.3 |
| TraesCS1B01G258100.1 | Wheat | nucleus | 16.46 | 19.95 |
| TraesCS5B01G193300.1 | Wheat | cytosol | 14.79 | 19.69 |
| TraesCS6B01G281100.1 | Wheat | mitochondrion, plastid | 11.67 | 19.65 |
| TraesCS2B01G181100.1 | Wheat | nucleus | 14.69 | 19.5 |
| TraesCS4B01G176800.1 | Wheat | cytosol | 16.35 | 19.31 |
| TraesCS1B01G231600.1 | Wheat | nucleus | 13.75 | 17.17 |
| TraesCS3B01G231600.1 | Wheat | cytosol | 14.17 | 16.61 |
| Bra025823.1-P | Field mustard | peroxisome | 19.58 | 16.38 |
| CDY29526 | Canola | peroxisome | 19.58 | 16.36 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G348100.1 | EnsemblPlantsGene:TraesCS5B01G348100 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF2 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5B:+:529488745..529492800
Molecular Weight (calculated)
104611.0 Da
IEP (calculated)
5.566
GRAVY (calculated)
-0.733
Length
960 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCGQSKLEE EKAVRHCRER SELLALAIRH RYTLADAHRA YADSLGRVGV ALHDFVRGVQ TLPPPPPEPT LHLPPGNRKG DGLPAASPAN NPAIASSSNG
101: QAPPPAAKQV RINPDDEHIH FHSDGDSDSE DGHIKFHSDD EAGPGQRRPE IVRSAGEPGQ RPPRQQMGPP PYGSSAYGPP PSYGAPPGYG YGGYPPPPDY
201: GGMGGPGGYD PGYGGMGGAG GNGPGYSSMG PPPPRSDGYD PPGYGGVGGY GQSFFNMNYA RSQPPPPSVS HQHRPEATDA TVQTFFNISY ARGQPPPPSV
301: SFKQRREASD ATVQTFFNTS YARGQPPPPS AAYEQRPQAS GARVHYYGDG GTQPPPRGYN GYASPPQSSY NQYAYGGYYG GAAAPPPADM PSSSREEVVP
401: PPPPSPPSVS TWDFLNPFET YGSYYDQPTA APAPYTPSRS SKDVREEEGI PDLEDEDMEV VKEAYGDDKH PLNGHTGKGK AAKEEGRSST GDELPRDSKS
501: SLPSSSGSSL DHDVHVVEKS VVGEQARQHV AGLPPTGSEK TYVDDNEVVL EIKAQFERAS SSAGEVSKML EVGKMPYYQK GSGFKVSAMM ICGIPTMEEE
601: FLRFEEDKAM GCGNLSSTLQ KLYMWERKLL QEVKAEEEER LKYDRKRQDL QILDEKGAET EKIIATEKEI RKLSTRISIA IQVVNTISGK ISKLRDDELW
701: PQTCELIQGL MRMWDVMLEC HQIQLHAISQ AKNIDSMIDA ARFGDDHMDL IKHLELQLLD WTTCFAGWVT AQKNYVSTLN DWLRKGVEYV PEETDDGVPP
801: FSPGRLGAPP IFVICNNWAA GVARISEKEV VKAMQAFASN VLHLWEKHRS QQRQGMMANK GMDRDLRVME KDEQKMRKAL EAKNKKLVLV SDQTGVSLSA
901: QVLQGAGPQA ENSSLQSSLR NIFEAMETFT AASANTYKDL NLRAEEEKAR VAGESGSSVP
101: QAPPPAAKQV RINPDDEHIH FHSDGDSDSE DGHIKFHSDD EAGPGQRRPE IVRSAGEPGQ RPPRQQMGPP PYGSSAYGPP PSYGAPPGYG YGGYPPPPDY
201: GGMGGPGGYD PGYGGMGGAG GNGPGYSSMG PPPPRSDGYD PPGYGGVGGY GQSFFNMNYA RSQPPPPSVS HQHRPEATDA TVQTFFNISY ARGQPPPPSV
301: SFKQRREASD ATVQTFFNTS YARGQPPPPS AAYEQRPQAS GARVHYYGDG GTQPPPRGYN GYASPPQSSY NQYAYGGYYG GAAAPPPADM PSSSREEVVP
401: PPPPSPPSVS TWDFLNPFET YGSYYDQPTA APAPYTPSRS SKDVREEEGI PDLEDEDMEV VKEAYGDDKH PLNGHTGKGK AAKEEGRSST GDELPRDSKS
501: SLPSSSGSSL DHDVHVVEKS VVGEQARQHV AGLPPTGSEK TYVDDNEVVL EIKAQFERAS SSAGEVSKML EVGKMPYYQK GSGFKVSAMM ICGIPTMEEE
601: FLRFEEDKAM GCGNLSSTLQ KLYMWERKLL QEVKAEEEER LKYDRKRQDL QILDEKGAET EKIIATEKEI RKLSTRISIA IQVVNTISGK ISKLRDDELW
701: PQTCELIQGL MRMWDVMLEC HQIQLHAISQ AKNIDSMIDA ARFGDDHMDL IKHLELQLLD WTTCFAGWVT AQKNYVSTLN DWLRKGVEYV PEETDDGVPP
801: FSPGRLGAPP IFVICNNWAA GVARISEKEV VKAMQAFASN VLHLWEKHRS QQRQGMMANK GMDRDLRVME KDEQKMRKAL EAKNKKLVLV SDQTGVSLSA
901: QVLQGAGPQA ENSSLQSSLR NIFEAMETFT AASANTYKDL NLRAEEEKAR VAGESGSSVP
001: MGCTSSKLDD LPAVALCRER CAFLEAAIHQ RYALAESHVA YTHSLREIGH SLHLFINHHH RFVASGGANV GDSPRLNLPP QRKGDLDDEA TNSPKKQKLA
101: SSHHNHNHAH SGSGSDSGHL EFDSDSDEDE EDDDDLDLDS LHHHSPPHHH LGNFPIPESA PMGGYMEQQP GYINPYPNPD MMGHPYSGGG SYMHMNYMKN
201: KSMPPSVVYE QRPTSPQRVY IGESSSSYPY PPQNSYFGYS NPVPGPGPGY YGSSSASTTA AATKPPPPPP SPPRSNGWDF LNPFDTYYPP YTPSRDSREL
301: REEEGIPDLE DDDSHYEVVK EVYGKPKFAA GGGHQPNPAA VHMMREESPS PPLDKSGAST SGGGDVGDAS AYQSRPSVSV EKEGMEYEVH VVEKKVVEDE
401: ERRSNATATR GGGGGGGPRA VPEVAKEIEN QFVKAAESGS EIAKLLEVGK HPYGRKHAAS KMLHGVTPSL PSTSGGTSSS AAAAVVPPTY ADIEEELASR
501: SRNLSSTLHK LHLWEKKLYH EVKAEEKLRL AHEKKLRKLK RLDQRGAEAI KVDKTRKLVR DMSTKIRIAI QVVDKISVTI NKIRDEDLWP QLNALIQGLT
601: RMWKTMLECH QSQCQAIREA QGLGPIRASK KLGDEHLEAT SLLGHELINW ILGFSSWVSA QKGYVKELNK WLMKCLLYEP EETPDGIVPF SPGRIGAPPI
701: FVICNQWSQA LDRISEKEVI EAMRSFTTSV LQLWEQDRLD TMMTGHGDSE KKVRNMDREE QRIQREIQAL EKKMILVAPG DGNSLSISGN VVYQSDTSSD
801: SLQGSLQRIF EAMERFTAES MRAYEDLLER TNEETAPREL EEEEEE
101: SSHHNHNHAH SGSGSDSGHL EFDSDSDEDE EDDDDLDLDS LHHHSPPHHH LGNFPIPESA PMGGYMEQQP GYINPYPNPD MMGHPYSGGG SYMHMNYMKN
201: KSMPPSVVYE QRPTSPQRVY IGESSSSYPY PPQNSYFGYS NPVPGPGPGY YGSSSASTTA AATKPPPPPP SPPRSNGWDF LNPFDTYYPP YTPSRDSREL
301: REEEGIPDLE DDDSHYEVVK EVYGKPKFAA GGGHQPNPAA VHMMREESPS PPLDKSGAST SGGGDVGDAS AYQSRPSVSV EKEGMEYEVH VVEKKVVEDE
401: ERRSNATATR GGGGGGGPRA VPEVAKEIEN QFVKAAESGS EIAKLLEVGK HPYGRKHAAS KMLHGVTPSL PSTSGGTSSS AAAAVVPPTY ADIEEELASR
501: SRNLSSTLHK LHLWEKKLYH EVKAEEKLRL AHEKKLRKLK RLDQRGAEAI KVDKTRKLVR DMSTKIRIAI QVVDKISVTI NKIRDEDLWP QLNALIQGLT
601: RMWKTMLECH QSQCQAIREA QGLGPIRASK KLGDEHLEAT SLLGHELINW ILGFSSWVSA QKGYVKELNK WLMKCLLYEP EETPDGIVPF SPGRIGAPPI
701: FVICNQWSQA LDRISEKEVI EAMRSFTTSV LQLWEQDRLD TMMTGHGDSE KKVRNMDREE QRIQREIQAL EKKMILVAPG DGNSLSISGN VVYQSDTSSD
801: SLQGSLQRIF EAMERFTAES MRAYEDLLER TNEETAPREL EEEEEE
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT4G35240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.