Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G198900.1 | Wheat | nucleus | 93.89 | 94.82 |
| TraesCS3D01G202100.2 | Wheat | nucleus | 92.92 | 93.95 |
| HORVU3Hr1G042920.6 | Barley | cytosol, nucleus | 89.26 | 83.26 |
| Os01t0500500-01 | Rice | nucleus, plasma membrane | 75.82 | 77.92 |
| Zm00001d040901_P001 | Maize | mitochondrion | 23.81 | 76.77 |
| KXG32552 | Sorghum | nucleus | 71.43 | 74.24 |
| CDX87081 | Canola | nucleus | 34.07 | 52.25 |
| GSMUA_Achr1P17130_001 | Banana | nucleus | 36.14 | 48.76 |
| KRH62002 | Soybean | cytosol | 39.32 | 46.07 |
| KRH52653 | Soybean | cytosol | 39.32 | 45.29 |
| VIT_04s0008g04200.t01 | Wine grape | cytosol | 38.1 | 44.13 |
| CDX80528 | Canola | nucleus | 38.95 | 43.52 |
| CDX88193 | Canola | nucleus | 38.58 | 42.88 |
| Bra009853.1-P | Field mustard | nucleus | 38.34 | 42.72 |
| Solyc08g068100.2.1 | Tomato | cytosol | 37.12 | 41.93 |
| AT5G25590.1 | Thale cress | nucleus | 39.56 | 41.81 |
| TraesCS2B01G181100.1 | Wheat | nucleus | 35.9 | 40.66 |
| TraesCS1B01G258100.1 | Wheat | nucleus | 38.95 | 40.28 |
| PGSC0003DMT400037619 | Potato | plastid | 31.62 | 40.09 |
| TraesCS5B01G330400.1 | Wheat | nucleus | 20.39 | 24.93 |
| TraesCS1B01G231600.1 | Wheat | nucleus | 22.34 | 23.8 |
| TraesCS6B01G281100.1 | Wheat | mitochondrion, plastid | 16.24 | 23.33 |
| TraesCS3B01G240800.1 | Wheat | nucleus | 19.9 | 23.32 |
| TraesCS5B01G335000.1 | Wheat | cytosol | 18.07 | 20.03 |
| TraesCS6B01G182400.1 | Wheat | cytosol | 14.65 | 19.17 |
| TraesCS7B01G171500.1 | Wheat | cytosol | 16.36 | 16.79 |
| TraesCS4B01G176800.1 | Wheat | cytosol | 16.61 | 16.73 |
| TraesCS5B01G193300.1 | Wheat | cytosol | 14.29 | 16.23 |
| TraesCS1B01G275500.1 | Wheat | nucleus | 16.73 | 15.38 |
| TraesCS6B01G271800.1 | Wheat | nucleus | 14.16 | 15.22 |
| TraesCS7B01G137800.1 | Wheat | nucleus | 16.0 | 15.11 |
| TraesCS2B01G423500.1 | Wheat | cytosol | 13.55 | 14.49 |
| TraesCS3B01G566500.1 | Wheat | plastid | 16.36 | 14.27 |
| TraesCS5B01G348100.1 | Wheat | nucleus | 16.61 | 14.17 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G231600.1 | EnsemblPlantsGene:TraesCS3B01G231600 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF12 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr3B:+:350421337..350433262
Molecular Weight (calculated)
90510.0 Da
IEP (calculated)
5.112
GRAVY (calculated)
-0.770
Length
819 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCAQSKIDQ EEAVCRCRDR KRLMADAVQA RNAFAAAHSA YTVLLKSTGG ALSDFAHGEA PDPSMIASHS HQAAVAAAAA GASASAPPPP TTTTVLIPXX
101: XXXXXXXXXX XXXXXXXSST PNIPMPDPRA ATKNRAPASA AIQEDEDGEE DGGHIITDSD DDDDDDDDDD DDDDDDDDDD DDDDDDEDDD NDHDDEDHHE
201: HDDFRMDDTV HGHPPKRGVM ESMGSSPVPP PPPPQLNPSP ITPASATPPP PMPEAQMATW DYFFGPTPTP PPTLEQQTDD TWMDRREKES VPVMNPAVGE
301: ASAPSRGAEE WAERPPQTAL EKAKAIDAAN LPPSKPIVRK PPKAPGLQPE VHHQHASSMG SVETWKGKIM MVSASLLQII AQLDDNFLKS SESAHDVSKK
401: LEATRMHYHS NHADSRGHID HSTKIMHVIT WNRSFKNLPD QEDLGVNFEI DERFETHATV LDRMLAWEKK LYDEVKAGEL MKIDYQKKVD LLHKQKKRGV
501: KLETLEKTKA AVSHLHTRYI VDMQSMDSTV SEINRLRDKQ LYPKLVDLVD GMAKMWSSMH RHHKSQFLII SGIRAFEVPP VPRETTDLHY KQTCELRDIV
601: REWHMQFDKL MDHQKGYIRA LNAWLKLNLI SIESNLKEKV SSPPRQVEPP IKNLLYAWHD QLERLPVELA KTAIKSFTEV ISNIVLLQEE EVSLRRRCEE
701: TRRDLDRKKA QFEDWHRRYT ERKASQGEEA NPEAANTPSL DHVNERRIAI EEVEIRLKEE EKLHLRLVRQ VREKTLANLR MHLPELFRNM ADFSFFCHDM
801: YSSLRKSAVL PMLRDEVQG
101: XXXXXXXXXX XXXXXXXSST PNIPMPDPRA ATKNRAPASA AIQEDEDGEE DGGHIITDSD DDDDDDDDDD DDDDDDDDDD DDDDDDEDDD NDHDDEDHHE
201: HDDFRMDDTV HGHPPKRGVM ESMGSSPVPP PPPPQLNPSP ITPASATPPP PMPEAQMATW DYFFGPTPTP PPTLEQQTDD TWMDRREKES VPVMNPAVGE
301: ASAPSRGAEE WAERPPQTAL EKAKAIDAAN LPPSKPIVRK PPKAPGLQPE VHHQHASSMG SVETWKGKIM MVSASLLQII AQLDDNFLKS SESAHDVSKK
401: LEATRMHYHS NHADSRGHID HSTKIMHVIT WNRSFKNLPD QEDLGVNFEI DERFETHATV LDRMLAWEKK LYDEVKAGEL MKIDYQKKVD LLHKQKKRGV
501: KLETLEKTKA AVSHLHTRYI VDMQSMDSTV SEINRLRDKQ LYPKLVDLVD GMAKMWSSMH RHHKSQFLII SGIRAFEVPP VPRETTDLHY KQTCELRDIV
601: REWHMQFDKL MDHQKGYIRA LNAWLKLNLI SIESNLKEKV SSPPRQVEPP IKNLLYAWHD QLERLPVELA KTAIKSFTEV ISNIVLLQEE EVSLRRRCEE
701: TRRDLDRKKA QFEDWHRRYT ERKASQGEEA NPEAANTPSL DHVNERRIAI EEVEIRLKEE EKLHLRLVRQ VREKTLANLR MHLPELFRNM ADFSFFCHDM
801: YSSLRKSAVL PMLRDEVQG
001: MGCAQSKIEN EEAVTRCKER KQLMKDAVTA RNAFAAAHSA YAMALKNTGA ALSDYSHGEF LVSNHSSSSA AAAIASTSSL PTAISPPLPS STAPVSNSTA
101: SSSSAAVPQP IPDTLPPPPP PPPLPLQRAA TMPEMNGRSG GGHAGSGLNG IEEDGALDND DDDDDDDDDS EMENRDRLIR KSRSRGGSTR GNRTTIEDHH
201: LQEEKAPPPP PLANSRPIPP PRQHQHQHQQ QQQQPFYDYF FPNVENMPGT TLEDTPPQPQ PQPTRPVPPQ PHSPVVTEDD EDEEEEEEEE EEEEETVIER
301: KPLVEERPKR VEEVTIELEK VTNLRGMKKS KGIGIPGERR GMRMPVTATH LANVFIELDD NFLKASESAH DVSKMLEATR LHYHSNFADN RGHIDHSARV
401: MRVITWNRSF RGIPNADDGK DDVDLEENET HATVLDKLLA WEKKLYDEVK AGELMKIEYQ KKVAHLNRVK KRGGHSDSLE RAKAAVSHLH TRYIVDMQSM
501: DSTVSEINRL RDEQLYLKLV HLVEAMGKMW EMMQIHHQRQ AEISKVLRSL DVSQAVKETN DHHHERTIQL LAVVQEWHTQ FCRMIDHQKE YIKALGGWLK
601: LNLIPIESTL KEKVSSPPRV PNPAIQKLLH AWYDRLDKIP DEMAKSAIIN FAAVVSTIMQ QQEDEISLRN KCEETRKELG RKIRQFEDWY HKYIQKRGPE
701: GMNPDEADND HNDEVAVRQF NVEQIKKRLE EEEEAYHRQS HQVREKSLAS LRTRLPELFQ AMSEVAYSCS DMYRAITYAS KRQSQSERHQ KPSQGQSS
101: SSSSAAVPQP IPDTLPPPPP PPPLPLQRAA TMPEMNGRSG GGHAGSGLNG IEEDGALDND DDDDDDDDDS EMENRDRLIR KSRSRGGSTR GNRTTIEDHH
201: LQEEKAPPPP PLANSRPIPP PRQHQHQHQQ QQQQPFYDYF FPNVENMPGT TLEDTPPQPQ PQPTRPVPPQ PHSPVVTEDD EDEEEEEEEE EEEEETVIER
301: KPLVEERPKR VEEVTIELEK VTNLRGMKKS KGIGIPGERR GMRMPVTATH LANVFIELDD NFLKASESAH DVSKMLEATR LHYHSNFADN RGHIDHSARV
401: MRVITWNRSF RGIPNADDGK DDVDLEENET HATVLDKLLA WEKKLYDEVK AGELMKIEYQ KKVAHLNRVK KRGGHSDSLE RAKAAVSHLH TRYIVDMQSM
501: DSTVSEINRL RDEQLYLKLV HLVEAMGKMW EMMQIHHQRQ AEISKVLRSL DVSQAVKETN DHHHERTIQL LAVVQEWHTQ FCRMIDHQKE YIKALGGWLK
601: LNLIPIESTL KEKVSSPPRV PNPAIQKLLH AWYDRLDKIP DEMAKSAIIN FAAVVSTIMQ QQEDEISLRN KCEETRKELG RKIRQFEDWY HKYIQKRGPE
701: GMNPDEADND HNDEVAVRQF NVEQIKKRLE EEEEAYHRQS HQVREKSLAS LRTRLPELFQ AMSEVAYSCS DMYRAITYAS KRQSQSERHQ KPSQGQSS
Arabidopsis Description
BZIP protein, putative; 48652-45869 [Source:UniProtKB/TrEMBL;Acc:Q9C824]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.