Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G154500.2 | Wheat | cytosol | 96.49 | 95.72 |
| TraesCS6D01G144300.1 | Wheat | cytosol | 94.09 | 93.05 |
| HORVU0Hr1G015650.2 | Barley | cytosol, nucleus | 60.86 | 86.2 |
| Os02t0175200-00 | Rice | cytosol, mitochondrion | 35.62 | 70.79 |
| EES06355 | Sorghum | cytosol | 67.57 | 69.0 |
| Zm00001d053766_P001 | Maize | cytosol | 66.29 | 66.4 |
| Os02t0175301-00 | Rice | nucleus | 36.1 | 60.27 |
| CDY28161 | Canola | nucleus | 10.7 | 32.68 |
| CDY66508 | Canola | cytosol, nucleus | 21.41 | 31.68 |
| KRH02818 | Soybean | nucleus | 36.26 | 30.47 |
| KRH19063 | Soybean | nucleus | 35.94 | 30.04 |
| CDY28162 | Canola | cytosol | 19.17 | 29.7 |
| Bra011166.1-P | Field mustard | nucleus | 30.99 | 29.26 |
| KRH37304 | Soybean | nucleus | 35.46 | 29.02 |
| KRH12287 | Soybean | nucleus | 35.46 | 28.72 |
| CDX68628 | Canola | nucleus | 30.99 | 28.7 |
| PGSC0003DMT400015690 | Potato | nucleus | 34.5 | 28.27 |
| Solyc07g047830.2.1 | Tomato | nucleus | 34.34 | 28.18 |
| VIT_11s0103g00310.t01 | Wine grape | nucleus | 34.19 | 27.9 |
| AT4G30130.3 | Thale cress | nucleus | 32.27 | 27.86 |
| CDY39136 | Canola | nucleus | 32.59 | 27.09 |
| CDX82615 | Canola | nucleus | 32.59 | 27.06 |
| AT2G19090.1 | Thale cress | nucleus | 34.34 | 26.41 |
| Bra038839.1-P | Field mustard | nucleus | 33.07 | 26.34 |
| Bra038563.1-P | Field mustard | nucleus | 33.71 | 26.02 |
| TraesCS7B01G137800.1 | Wheat | nucleus | 35.14 | 25.37 |
| TraesCS5B01G335000.1 | Wheat | cytosol | 22.68 | 19.22 |
| TraesCS5B01G330400.1 | Wheat | nucleus | 18.85 | 17.61 |
| TraesCS6B01G281100.1 | Wheat | mitochondrion, plastid | 15.97 | 17.54 |
| TraesCS6B01G271800.1 | Wheat | nucleus | 20.45 | 16.8 |
| TraesCS5B01G193300.1 | Wheat | cytosol | 18.69 | 16.23 |
| TraesCS4B01G176800.1 | Wheat | cytosol | 20.93 | 16.11 |
| TraesCS7B01G171500.1 | Wheat | cytosol | 20.45 | 16.04 |
| TraesCS2B01G423500.1 | Wheat | cytosol | 19.33 | 15.8 |
| TraesCS3B01G240800.1 | Wheat | nucleus | 17.25 | 15.45 |
| TraesCS1B01G275500.1 | Wheat | nucleus | 21.73 | 15.26 |
| TraesCS1B01G258100.1 | Wheat | nucleus | 19.17 | 15.15 |
| TraesCS1B01G231600.1 | Wheat | nucleus | 18.53 | 15.08 |
| TraesCS3B01G566500.1 | Wheat | plastid | 22.36 | 14.91 |
| TraesCS3B01G231600.1 | Wheat | cytosol | 19.17 | 14.65 |
| TraesCS5B01G348100.1 | Wheat | nucleus | 22.36 | 14.58 |
| TraesCS2B01G181100.1 | Wheat | nucleus | 16.29 | 14.11 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G182400.1 | EnsemblPlantsGene:TraesCS6B01G182400 | InterPro:DUF630 | InterPro:DUF632 | PANTHER:PTHR21450 | PANTHER:PTHR21450:SF3 |
| PFAM:PF04782 | PFAM:PF04783 | SEG:seg | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6B:+:204330849..204333102
Molecular Weight (calculated)
68033.8 Da
IEP (calculated)
5.084
GRAVY (calculated)
-0.440
Length
626 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCSSSKKLD EEEAVKTCHD RRSFVKKAIA QRDLLASSHV AYLQSLRRVS LALFYCLAED EHLYFLQDTS AQCTHRPCSP EKRAVLLVVN RLRPGGAPVH
101: PLVGRWDGEA GAAEAAVVDG FFGVDTRLFR PPANDVPVSS PSHLPSAWDV FWVDPFSSLP TDHVGYANHG VQEMVNADQE DGEMPELEEI SEDGSNGEGE
201: SKEEEAPRHE VVVEPRERKE KKKVAGVSNK LRVRASAEVE QQSTPGRFTV FVDRPPASVA EAMRDIKGHF SKIAETAGEV SVLLEVVPYQ KKVQPPAPRG
301: DVDGDDGGER VGAREPSPEP FQLFQSHKES LDRLYAWEKK LYEEVRAGER VRLSYEKKVA QLRSQDANGA EPFAIERTRA AIRDLRTKLN ISLASVDAVS
401: RRIVAVRDDE LLPQLAELIR GLARMWRVIG DAHRVMKRTA DEASALLSSS AAGAEGGIRG PPPLSGPTRA ATAAGALATE LRGWRAALEA WAESQRGYAA
501: ALWGWARSCV KDGEDMPRLI VAWARAVEAV DVDAATRAVE GVAAEAAAIA AAARRRSSSA EEEPPNEEEG KRRVCVGLAA ALGAIAEAGS LASAAYGELV
601: AEMDEREREA EMAGRDDEPS IQNNPP
101: PLVGRWDGEA GAAEAAVVDG FFGVDTRLFR PPANDVPVSS PSHLPSAWDV FWVDPFSSLP TDHVGYANHG VQEMVNADQE DGEMPELEEI SEDGSNGEGE
201: SKEEEAPRHE VVVEPRERKE KKKVAGVSNK LRVRASAEVE QQSTPGRFTV FVDRPPASVA EAMRDIKGHF SKIAETAGEV SVLLEVVPYQ KKVQPPAPRG
301: DVDGDDGGER VGAREPSPEP FQLFQSHKES LDRLYAWEKK LYEEVRAGER VRLSYEKKVA QLRSQDANGA EPFAIERTRA AIRDLRTKLN ISLASVDAVS
401: RRIVAVRDDE LLPQLAELIR GLARMWRVIG DAHRVMKRTA DEASALLSSS AAGAEGGIRG PPPLSGPTRA ATAAGALATE LRGWRAALEA WAESQRGYAA
501: ALWGWARSCV KDGEDMPRLI VAWARAVEAV DVDAATRAVE GVAAEAAAIA AAARRRSSSA EEEPPNEEEG KRRVCVGLAA ALGAIAEAGS LASAAYGELV
601: AEMDEREREA EMAGRDDEPS IQNNPP
001: MGCSHSKLDD EEAVQICKDR KRFIKQAIEH RTKFASGHIA YIHSLRKVSD ALHDFILQGD NNNEFVPTLC QDSFVTPVKR MPQRRRRSSR SNSGEFISIS
101: PSSIPPKMIQ GRPRSNVKAN YLMANRSRPV RVEQRSPETF RVETFSPPSS SNQYGESDGF FGMNMNMNTS ASTSSSFWNP LSSPEQRLSS HNIPPPSPQN
201: SQWDFFWNPF SSLDYYGYNS YDRGSVDSRS GIDDEIRGLR RVREEEGIPD LEEDDEPHKP EPVVNVRFQN HNPNPKATEE NRGKVDKSCC NEEVKVEDVD
301: EDEDEDGDED DDEFTDSGCE TENEGDEKCV APPTQEQRKA EVCRGGEATG NVVGVGKVQE MKNVVGVRDD AKTTGFTVYV NRRPTSMAEV IKDLEDQFTT
401: ICDAAKEVSG LLEAGRAQYT SSFNDHSARK MLNPVALFRS GSSRSSSSRF LITSSGGSRE SGSESRSDVS DESCMISGSH QTTLDRLFAW EKKLYDEVRS
501: GERVRRAYEK KCMQLRNQDV KGDDPLAVDK TRATIRDLDT QIKVSIHSIE SISKRIETLR DQELLPQLLE LVEGLTRMWK VMAESHQIQK RTLDEAKLLL
601: AGTPVSKRHK KRQPPIMPEA INSQRLAQSA LNLEAQLRNW RTCFEFWITS QRSYMKALSG WLLRCFRCDP DPEKVRLSSC LHPIYRVCIQ WSRLLNSLNE
701: KPVLDKLEFF ASGMGSIYAR QVREDPNWSG SGSRRYSGSE SMELVVADKG EEDVVMTAEK LAEVAVKVLC HGMSVAVSSL AEFSINSADE HSKLVSQPAD
801: DASEQQPPDV NFNS
101: PSSIPPKMIQ GRPRSNVKAN YLMANRSRPV RVEQRSPETF RVETFSPPSS SNQYGESDGF FGMNMNMNTS ASTSSSFWNP LSSPEQRLSS HNIPPPSPQN
201: SQWDFFWNPF SSLDYYGYNS YDRGSVDSRS GIDDEIRGLR RVREEEGIPD LEEDDEPHKP EPVVNVRFQN HNPNPKATEE NRGKVDKSCC NEEVKVEDVD
301: EDEDEDGDED DDEFTDSGCE TENEGDEKCV APPTQEQRKA EVCRGGEATG NVVGVGKVQE MKNVVGVRDD AKTTGFTVYV NRRPTSMAEV IKDLEDQFTT
401: ICDAAKEVSG LLEAGRAQYT SSFNDHSARK MLNPVALFRS GSSRSSSSRF LITSSGGSRE SGSESRSDVS DESCMISGSH QTTLDRLFAW EKKLYDEVRS
501: GERVRRAYEK KCMQLRNQDV KGDDPLAVDK TRATIRDLDT QIKVSIHSIE SISKRIETLR DQELLPQLLE LVEGLTRMWK VMAESHQIQK RTLDEAKLLL
601: AGTPVSKRHK KRQPPIMPEA INSQRLAQSA LNLEAQLRNW RTCFEFWITS QRSYMKALSG WLLRCFRCDP DPEKVRLSSC LHPIYRVCIQ WSRLLNSLNE
701: KPVLDKLEFF ASGMGSIYAR QVREDPNWSG SGSRRYSGSE SMELVVADKG EEDVVMTAEK LAEVAVKVLC HGMSVAVSSL AEFSINSADE HSKLVSQPAD
801: DASEQQPPDV NFNS
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G19090]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.