Factsheet for TraesCS2B01G423500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G402400.1	Wheat	cytosol	95.04	95.92
TraesCS2A01G405700.1	Wheat	cytosol	93.86	94.48
HORVU2Hr1G096140.2	Barley	cytosol	45.56	93.32
HORVU2Hr1G096180.1	Barley	cytosol	70.76	88.56
Os04t0562800-00	Rice	cytosol, mitochondrion	49.22	68.8
KXG26898	Sorghum	cytosol	66.19	63.93
Zm00001d026130_P001	Maize	nucleus	64.75	62.86
Zm00001d002669_P002	Maize	cytosol	64.36	62.48
TraesCS6B01G271800.1	Wheat	nucleus	56.01	56.3
GSMUA_Achr11P...	Banana	mitochondrion	38.51	43.9
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	33.55	39.0
CDX76322	Canola	cytosol	32.51	35.22
CDX88008	Canola	nucleus	32.77	35.1
Bra009665.1-P	Field mustard	cytosol	32.38	35.08
CDY17530	Canola	cytosol	32.51	35.07
AT2G17110.1	Thale cress	nucleus	32.9	34.38
CDY07877	Canola	cytosol	31.98	34.27
Bra020807.1-P	Field mustard	nucleus	34.07	34.21
CDX75484	Canola	cytosol, plastid	30.55	33.57
VIT_03s0038g03260.t01	Wine grape	cytosol	34.33	32.39
AT4G35240.1	Thale cress	nucleus	36.42	32.25
CDX69122	Canola	nucleus	31.59	32.22
TraesCS7B01G171500.1	Wheat	cytosol	33.42	32.08
Bra011597.1-P	Field mustard	nucleus	34.99	32.06
KRH14028	Soybean	cytosol	30.16	31.51
Solyc10g074470.1.1	Tomato	cytosol	33.03	31.51
PGSC0003DMT400043330	Potato	mitochondrion	33.03	31.35
KRH74089	Soybean	cytosol	31.59	30.91
Solyc01g112050.2.1	Tomato	nucleus	35.9	30.9
PGSC0003DMT400048013	Potato	nucleus	36.16	30.34
TraesCS5B01G348100.1	Wheat	nucleus	37.47	29.9
KRH60958	Soybean	cytosol	24.8	28.7
KRH51633	Soybean	cytosol	24.8	28.61
VIT_18s0001g00170.t01	Wine grape	cytosol	27.02	27.9
CDY31475	Canola	nucleus	21.15	26.91
AT1G20530.1	Thale cress	cytosol	21.54	26.87
TraesCS1B01G275500.1	Wheat	nucleus	27.15	23.34
TraesCS5B01G335000.1	Wheat	cytosol	21.15	21.92
TraesCS5B01G330400.1	Wheat	nucleus	18.28	20.9
TraesCS3B01G566500.1	Wheat	plastid	24.02	19.6
TraesCS6B01G182400.1	Wheat	cytosol	15.8	19.33
TraesCS7B01G137800.1	Wheat	nucleus	20.63	18.22
TraesCS3B01G240800.1	Wheat	nucleus	16.58	18.17
TraesCS1B01G231600.1	Wheat	nucleus	18.02	17.95
TraesCS6B01G281100.1	Wheat	mitochondrion, plastid	12.92	17.37
TraesCS4B01G176800.1	Wheat	cytosol	17.1	16.11
TraesCS2B01G181100.1	Wheat	nucleus	15.01	15.91
TraesCS5B01G193300.1	Wheat	cytosol	14.88	15.81
TraesCS1B01G258100.1	Wheat	nucleus	16.06	15.53
CDY29526	Canola	peroxisome	21.67	14.45
Bra025823.1-P	Field mustard	peroxisome	21.54	14.37
TraesCS3B01G231600.1	Wheat	cytosol	14.49	13.55

Protein Annotations

EnsemblPlants:TraesCS2B01G423500.1	EnsemblPlantsGene:TraesCS2B01G423500	InterPro:DUF630	InterPro:DUF632	ncoils:Coil	PANTHER:PTHR21450
PANTHER:PTHR21450:SF20	PFAM:PF04782	PFAM:PF04783	SEG:seg	MapMan:35.1	:

Description

No Description!

Coordinates

chr2B:-:608941703..608945939

Molecular Weight (calculated)

84890.5 Da

IEP (calculated)

9.122

GRAVY (calculated)

-0.509

Length

766 amino acids

Sequence
(BLAST)

001: MGCKGSKLDS QEAVALCRGR ADLIAAAVRH RYALADAHAA LAGSYESLAA PLHLLLQLQD EPPRLSLPED RKGGRRGGGG GLPLPDRRHS SHVDFEPTSS
101: SGSDSASSPA GSPPRRVHEQ LLPQPNYYGY APEPAFAYPA PPQSTMQFYY ARSRPPPASV AVAQRAPVSE RARYGAFDAA VGGGYPQYYA YGGEPAAAAA
201: APPPPPPQRT AAPAPAPLPP PRETSSWDFL NVFENYDDSY DGYYYNPTTT AAAAAAAYTP SRSSREVREE EGIPELEEDD EETVVVKEMA SEYSTVGSGR
301: SRRGSFGAVN TIPEAEVDNR RNVQRRRPAY RNVAPLTREP PAQRVVGNAV DAATAVKTQL VRVAEAAREL APLLEVGRPS YQGRNSVYHA ASSRMMSAIS
401: VAHLGCKDED MLGMVVGEEG KVVGSWSLSL TLEKLYFWER KLYGEVKAEE KMRLRLARNS KRLKLLDQRG AEAHKVDATR NLLRKLSTKI RIAVRVIAKV
501: SRKINKVRDE ELVPQVNTLI QGFAKMWQDK LHSYQIQLQV ISEAKNLASV TSGGTNGRDL AMELELELIK WIINFSSWVS AHRNFVKSLN GWLALCLNYE
601: PQEAPTYSPR RIGAPVIFVI CNKWSQAMDR ISEKDVVNAM QALVSSVRHL WEQQNLDQSE RSVAVREREK WIKMLERKAL EINKEADELN RKLALVPGQQ
701: QSFQRCPTIR TYEAHHIEAS SVHVNLRLVV QALEDFASNS LEAFQEIPRL DEEPTRPSRG SSRVPR

Best Arabidopsis Sequence Match ( AT2G17110.1 )
(BLAST)

001: MGCSTSKLDD LPAVALCRDR CSFLEAAIHQ RYALSEAHVS YTQSLKAISH SLHQFINHHH RYNDSDSPKK AKPKMDSGSG HLDFDSDSDS DDDDDIDSLH
101: SSPLHHHLED DDSNPKSYLH MNYMKNSYMP PSLVYEQRPS SPQRVHFGES SSSSTSEYNP YLNSNYGSKL PPPPPSPPRE KVWDFLDPFD TYYTPYTPSR
201: DTRELRDELG VPDLEEDDVV VKEVHGKQKF VAAVSVEEPL GNSGASTSGG GGGGGKASLY QTRPSVSVEK EEMEHEVHIV EKKIVEDSGG DEVRKSKAAV
301: ARGGGGVRRG VPEVAKEIEA QFLRAAESGN EIAVMLEVGK HPYGRKNVSS KKLYEGTPSP SVVSSAQSST SKKAKAEASS SVTAPTYADI EAELALKSRN
401: LSSTLHKLHL WEKKLYDEVK AEEKMRVNHE KKLRKLKRMD ERGAENQKVD STRKLVRSLS TKIRIAIQVV DKISVTINKI RDEELWLQLN ELIQGLSKMW
501: KSMLECHKSQ CEAIKEARGL GPIRASKNFG GEHLEVTRTL GYELINWIVG FSSWVSAQKG FVRELNSWLM KCLFYEPEET PDGIVPFSPG RIGAPMIFVI
601: CNQWEQALDR ISEKEVIEAI RRFTTSVLHL WEQDRLATRE RIIGHGDPRN MDREEQRIQK EIQELEMKMV LVGPGEDNIV YQSDTSNESL QGSLQRIFEA
701: MERFTEESLK AYVDLLHRAE EEECDSRETD EED

Arabidopsis Description

Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G17110]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.