Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17530 | Canola | cytosol | 92.93 | 92.54 |
| Bra020807.1-P | Field mustard | nucleus | 99.72 | 92.4 |
| CDX75484 | Canola | cytosol, plastid | 74.68 | 75.75 |
| CDX69122 | Canola | nucleus | 80.06 | 75.37 |
| AT4G35240.1 | Thale cress | nucleus | 85.71 | 70.06 |
| CDY07877 | Canola | cytosol | 64.36 | 63.64 |
| CDX88008 | Canola | nucleus | 64.22 | 63.5 |
| KRH14028 | Soybean | cytosol | 53.32 | 51.43 |
| KRH74089 | Soybean | cytosol | 56.01 | 50.57 |
| Solyc10g074470.1.1 | Tomato | cytosol | 53.18 | 46.82 |
| VIT_03s0038g03260.t01 | Wine grape | cytosol | 53.61 | 46.67 |
| PGSC0003DMT400043330 | Potato | mitochondrion | 53.04 | 46.47 |
| Solyc01g112050.2.1 | Tomato | nucleus | 54.03 | 42.92 |
| Os02t0669900-01 | Rice | cytosol | 25.88 | 42.86 |
| PGSC0003DMT400048013 | Potato | nucleus | 54.17 | 41.95 |
| HORVU2Hr1G096140.2 | Barley | cytosol | 20.79 | 39.3 |
| Os04t0562800-00 | Rice | cytosol, mitochondrion | 30.41 | 39.23 |
| GSMUA_Achr3P14690_001 | Banana | nucleus | 38.76 | 38.92 |
| GSMUA_Achr7P04020_001 | Banana | cytosol | 37.91 | 38.29 |
| GSMUA_Achr1P18120_001 | Banana | cytosol | 36.63 | 38.09 |
| GSMUA_Achr11P... | Banana | mitochondrion | 34.79 | 36.61 |
| OQU85656 | Sorghum | cytosol | 38.61 | 35.64 |
| Zm00001d017553_P001 | Maize | cytosol | 37.34 | 35.06 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, nucleus | 32.53 | 34.9 |
| TraesCS6D01G235200.1 | Wheat | nucleus | 37.48 | 34.73 |
| HORVU7Hr1G057760.4 | Barley | cytosol | 32.11 | 34.66 |
| TraesCS6B01G271800.1 | Wheat | nucleus | 37.2 | 34.51 |
| HORVU6Hr1G064670.13 | Barley | nucleus | 37.06 | 34.47 |
| TraesCS6A01G253600.1 | Wheat | nucleus | 37.2 | 34.47 |
| HORVU2Hr1G096180.1 | Barley | cytosol | 29.56 | 34.15 |
| Os08t0551200-00 | Rice | cytosol | 38.33 | 33.46 |
| TraesCS2D01G402400.1 | Wheat | cytosol | 35.64 | 33.2 |
| TraesCS2A01G405700.1 | Wheat | cytosol | 35.36 | 32.85 |
| KXG26898 | Sorghum | cytosol | 36.78 | 32.79 |
| TraesCS7D01G273600.1 | Wheat | cytosol | 37.48 | 32.72 |
| TraesCS2B01G423500.1 | Wheat | cytosol | 35.22 | 32.51 |
| Zm00001d002669_P002 | Maize | cytosol | 36.21 | 32.45 |
| Os09t0547300-01 | Rice | nucleus | 41.87 | 32.21 |
| EER97130 | Sorghum | nucleus | 41.58 | 32.2 |
| Zm00001d026130_P001 | Maize | nucleus | 35.64 | 31.94 |
| Zm00001d006286_P001 | Maize | nucleus | 41.02 | 31.73 |
| TraesCS7B01G171500.1 | Wheat | cytosol | 35.64 | 31.58 |
| Zm00001d021452_P001 | Maize | nucleus | 42.01 | 31.56 |
| CDY31475 | Canola | nucleus | 26.45 | 31.06 |
| TraesCS5B01G348100.1 | Wheat | nucleus | 41.44 | 30.52 |
| TraesCS5D01G353500.1 | Wheat | nucleus | 41.44 | 30.39 |
| TraesCS5A01G347200.1 | Wheat | nucleus | 41.16 | 30.34 |
| HORVU5Hr1G086500.2 | Barley | nucleus | 41.44 | 30.27 |
| CDX88372 | Canola | nucleus | 34.37 | 29.42 |
| CDY41788 | Canola | nucleus | 35.08 | 29.11 |
| CDY04672 | Canola | nucleus | 35.5 | 28.78 |
| CDY08177 | Canola | nucleus | 36.21 | 28.73 |
| TraesCS7A01G273600.1 | Wheat | cytosol, mitochondrion, nucleus | 36.92 | 27.83 |
| CDY28161 | Canola | nucleus | 8.06 | 27.8 |
| CDY28162 | Canola | cytosol | 14.99 | 26.24 |
| CDY66508 | Canola | cytosol, nucleus | 15.28 | 25.53 |
| CDY42005 | Canola | nucleus | 21.36 | 24.67 |
| CDX69386 | Canola | nucleus | 21.07 | 24.67 |
| CDX68628 | Canola | nucleus | 23.48 | 24.56 |
| CDY42454 | Canola | cytosol | 23.62 | 23.82 |
| CDY18335 | Canola | cytosol | 23.62 | 23.62 |
| CDX77992 | Canola | nucleus | 20.65 | 23.21 |
| CDX82615 | Canola | nucleus | 24.75 | 23.21 |
| CDY39136 | Canola | nucleus | 24.61 | 23.11 |
| CDX87516 | Canola | nucleus | 14.57 | 22.89 |
| CDX73734 | Canola | nucleus | 20.65 | 22.81 |
| CDX87081 | Canola | nucleus | 16.83 | 22.28 |
| CDY04477 | Canola | nucleus | 21.64 | 21.28 |
| CDX71474 | Canola | nucleus | 21.36 | 21.0 |
| CDX83412 | Canola | nucleus | 19.52 | 20.51 |
| CDX95620 | Canola | nucleus | 18.95 | 19.28 |
| CDY56992 | Canola | nucleus | 19.52 | 18.98 |
| CDX84637 | Canola | cytosol | 17.82 | 18.78 |
| CDY42691 | Canola | nucleus | 19.09 | 18.67 |
| CDX80528 | Canola | nucleus | 19.24 | 18.55 |
| CDX71821 | Canola | nucleus | 18.53 | 18.45 |
| CDX88193 | Canola | nucleus | 19.09 | 18.32 |
| CDY41178 | Canola | nucleus | 18.53 | 18.17 |
| CDX79570 | Canola | cytosol | 17.4 | 17.85 |
| CDY61085 | Canola | nucleus | 18.1 | 17.16 |
| CDY52975 | Canola | nucleus | 18.1 | 17.14 |
| CDY29526 | Canola | peroxisome | 26.45 | 16.27 |
Protein Annotations
| EnsemblPlants:CDX76322 | EnsemblPlantsGene:GSBRNA2T00126695001 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF2 | PFAM:PF04782 | PFAM:PF04783 | ProteinID:CDX76322 | ProteinID:CDX76322.1 | SEG:seg |
| UniParc:UPI0004EE2237 | MapMan:35.1 | : | : | : | : |
Description
BnaA08g10780D
Coordinates
chrLK031807:-:347509..350529
Molecular Weight (calculated)
79663.6 Da
IEP (calculated)
5.163
GRAVY (calculated)
-0.688
Length
707 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCTSSKLDD LPAVALCRER CNFLEAAIQQ RYDLAESHVA YTHSLKGIGH SLHLFINHHH RCFDSDSEDD DDEEDHLDLD HHHHLGNFET GPYMGSQPGY
101: TRYPNPEMMG TPYMHMNYMK NSSMPPSLIY EQRPSCPQKV YIGESGPGPG YYGSSTDDPP PPSPPRSNGW DFLNPFDTYY PSYTPSRDSR ELREEEGIPE
201: LEEDDDSQYE VVKEVHGRDN QPTPAVVYRE ESDSPSPSPR LSVDKSGAST SGGDAAMYQT RPSVSVEKNG VEYEVHVVEK TVVEDGGNES NATATRGGGG
301: GGPRAVPEVA KEIENQFVRA AESGSEIAKL LEVGKRPYGR KHAASKLLHG VTPSVAEPPT YADIEEELAS RSRNLSSTLH KLHLWEKKLY REVKAEEKLR
401: VAHEKKVRKL KRLDERGAEA TKVDTTRKLV RDMNTKIRIA IQVVDKISVT INKIRDEDLW PQLNALIQGL TRMWKEMLEC HQSQCQAIKE ARGLGSIRAS
501: KKLGDEHLEA TSLLGHELIN WILGFSSWVS AQKCYVRELN KWLMKCLLYE PEETADGIAP FSPGRLGAPP IFVICNQWSQ ALDRISEKEV IEAMRSFTTS
601: VLQLWEQDRL ETTVMGQEKV RSMDREEQRI HREIQALEKK MVLVAPGDGL LVSGNVVYQS DTSSDSLQGS LQRIFEAMER FTDECMRAYD DLLVRAEEVT
701: APRESEE
101: TRYPNPEMMG TPYMHMNYMK NSSMPPSLIY EQRPSCPQKV YIGESGPGPG YYGSSTDDPP PPSPPRSNGW DFLNPFDTYY PSYTPSRDSR ELREEEGIPE
201: LEEDDDSQYE VVKEVHGRDN QPTPAVVYRE ESDSPSPSPR LSVDKSGAST SGGDAAMYQT RPSVSVEKNG VEYEVHVVEK TVVEDGGNES NATATRGGGG
301: GGPRAVPEVA KEIENQFVRA AESGSEIAKL LEVGKRPYGR KHAASKLLHG VTPSVAEPPT YADIEEELAS RSRNLSSTLH KLHLWEKKLY REVKAEEKLR
401: VAHEKKVRKL KRLDERGAEA TKVDTTRKLV RDMNTKIRIA IQVVDKISVT INKIRDEDLW PQLNALIQGL TRMWKEMLEC HQSQCQAIKE ARGLGSIRAS
501: KKLGDEHLEA TSLLGHELIN WILGFSSWVS AQKCYVRELN KWLMKCLLYE PEETADGIAP FSPGRLGAPP IFVICNQWSQ ALDRISEKEV IEAMRSFTTS
601: VLQLWEQDRL ETTVMGQEKV RSMDREEQRI HREIQALEKK MVLVAPGDGL LVSGNVVYQS DTSSDSLQGS LQRIFEAMER FTDECMRAYD DLLVRAEEVT
701: APRESEE
001: MGCTSSKLDD LPAVALCRER CAFLEAAIHQ RYALAESHVA YTHSLREIGH SLHLFINHHH RFVASGGANV GDSPRLNLPP QRKGDLDDEA TNSPKKQKLA
101: SSHHNHNHAH SGSGSDSGHL EFDSDSDEDE EDDDDLDLDS LHHHSPPHHH LGNFPIPESA PMGGYMEQQP GYINPYPNPD MMGHPYSGGG SYMHMNYMKN
201: KSMPPSVVYE QRPTSPQRVY IGESSSSYPY PPQNSYFGYS NPVPGPGPGY YGSSSASTTA AATKPPPPPP SPPRSNGWDF LNPFDTYYPP YTPSRDSREL
301: REEEGIPDLE DDDSHYEVVK EVYGKPKFAA GGGHQPNPAA VHMMREESPS PPLDKSGAST SGGGDVGDAS AYQSRPSVSV EKEGMEYEVH VVEKKVVEDE
401: ERRSNATATR GGGGGGGPRA VPEVAKEIEN QFVKAAESGS EIAKLLEVGK HPYGRKHAAS KMLHGVTPSL PSTSGGTSSS AAAAVVPPTY ADIEEELASR
501: SRNLSSTLHK LHLWEKKLYH EVKAEEKLRL AHEKKLRKLK RLDQRGAEAI KVDKTRKLVR DMSTKIRIAI QVVDKISVTI NKIRDEDLWP QLNALIQGLT
601: RMWKTMLECH QSQCQAIREA QGLGPIRASK KLGDEHLEAT SLLGHELINW ILGFSSWVSA QKGYVKELNK WLMKCLLYEP EETPDGIVPF SPGRIGAPPI
701: FVICNQWSQA LDRISEKEVI EAMRSFTTSV LQLWEQDRLD TMMTGHGDSE KKVRNMDREE QRIQREIQAL EKKMILVAPG DGNSLSISGN VVYQSDTSSD
801: SLQGSLQRIF EAMERFTAES MRAYEDLLER TNEETAPREL EEEEEE
101: SSHHNHNHAH SGSGSDSGHL EFDSDSDEDE EDDDDLDLDS LHHHSPPHHH LGNFPIPESA PMGGYMEQQP GYINPYPNPD MMGHPYSGGG SYMHMNYMKN
201: KSMPPSVVYE QRPTSPQRVY IGESSSSYPY PPQNSYFGYS NPVPGPGPGY YGSSSASTTA AATKPPPPPP SPPRSNGWDF LNPFDTYYPP YTPSRDSREL
301: REEEGIPDLE DDDSHYEVVK EVYGKPKFAA GGGHQPNPAA VHMMREESPS PPLDKSGAST SGGGDVGDAS AYQSRPSVSV EKEGMEYEVH VVEKKVVEDE
401: ERRSNATATR GGGGGGGPRA VPEVAKEIEN QFVKAAESGS EIAKLLEVGK HPYGRKHAAS KMLHGVTPSL PSTSGGTSSS AAAAVVPPTY ADIEEELASR
501: SRNLSSTLHK LHLWEKKLYH EVKAEEKLRL AHEKKLRKLK RLDQRGAEAI KVDKTRKLVR DMSTKIRIAI QVVDKISVTI NKIRDEDLWP QLNALIQGLT
601: RMWKTMLECH QSQCQAIREA QGLGPIRASK KLGDEHLEAT SLLGHELINW ILGFSSWVSA QKGYVKELNK WLMKCLLYEP EETPDGIVPF SPGRIGAPPI
701: FVICNQWSQA LDRISEKEVI EAMRSFTTSV LQLWEQDRLD TMMTGHGDSE KKVRNMDREE QRIQREIQAL EKKMILVAPG DGNSLSISGN VVYQSDTSSD
801: SLQGSLQRIF EAMERFTAES MRAYEDLLER TNEETAPREL EEEEEE
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT4G35240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.