Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04672 | Canola | nucleus | 94.61 | 96.67 |
| Bra017947.1-P | Field mustard | nucleus | 98.77 | 95.97 |
| AT1G21740.1 | Thale cress | cytosol | 85.97 | 80.38 |
| CDY41788 | Canola | nucleus | 61.28 | 64.08 |
| CDX88372 | Canola | nucleus | 58.92 | 63.56 |
| PGSC0003DMT400045246 | Potato | mitochondrion | 17.85 | 60.92 |
| CDX87516 | Canola | nucleus | 28.96 | 57.33 |
| VIT_18s0001g02480.t01 | Wine grape | nucleus | 48.15 | 55.0 |
| KRH64648 | Soybean | cytosol | 49.38 | 52.57 |
| KRH53256 | Soybean | cytosol | 49.27 | 52.14 |
| GSMUA_Achr3P22040_001 | Banana | cytosol | 35.35 | 45.92 |
| Solyc06g060270.2.1 | Tomato | nucleus | 48.48 | 42.6 |
| GSMUA_Achr9P08510_001 | Banana | nucleus | 35.69 | 40.66 |
| GSMUA_Achr3P19020_001 | Banana | cytosol | 34.23 | 36.97 |
| CDX76322 | Canola | cytosol | 28.73 | 36.21 |
| CDY17530 | Canola | cytosol | 28.84 | 36.2 |
| CDX88008 | Canola | nucleus | 28.28 | 35.24 |
| CDY07877 | Canola | cytosol | 28.28 | 35.24 |
| TraesCS1A01G264800.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 35.02 | 34.98 |
| TraesCS1D01G265000.1 | Wheat | nucleus | 35.13 | 34.86 |
| TraesCS1B01G275500.1 | Wheat | nucleus | 34.57 | 34.57 |
| EES19545 | Sorghum | nucleus | 34.68 | 34.26 |
| Os05t0425000-00 | Rice | nucleus | 33.56 | 33.79 |
| Zm00001d038223_P001 | Maize | cytosol | 34.23 | 33.63 |
| CDX69122 | Canola | nucleus | 28.28 | 33.56 |
| CDX75484 | Canola | cytosol, plastid | 26.15 | 33.43 |
| Os01t0960200-00 | Rice | nucleus | 9.54 | 31.72 |
| TraesCS3A01G503100.1 | Wheat | cytosol | 24.92 | 30.0 |
| HORVU3Hr1G110830.5 | Barley | cytosol, nucleus | 23.12 | 29.64 |
| TraesCS3D01G509700.1 | Wheat | plastid | 30.42 | 29.46 |
| CDY42454 | Canola | cytosol | 23.12 | 29.39 |
| CDY18335 | Canola | cytosol | 23.23 | 29.28 |
| Zm00001d011823_P002 | Maize | plastid | 29.41 | 29.18 |
| TraesCS3B01G566500.1 | Wheat | plastid | 30.64 | 29.07 |
| KXG34164 | Sorghum | plastid | 30.19 | 28.99 |
| CDY28162 | Canola | cytosol | 13.13 | 28.96 |
| CDY31475 | Canola | nucleus | 19.3 | 28.57 |
| CDY28161 | Canola | nucleus | 6.51 | 28.29 |
| CDY66508 | Canola | cytosol, nucleus | 12.79 | 26.95 |
| CDY42005 | Canola | nucleus | 18.07 | 26.31 |
| CDX69386 | Canola | nucleus | 17.73 | 26.16 |
| CDX68628 | Canola | nucleus | 19.75 | 26.04 |
| CDY39136 | Canola | nucleus | 20.43 | 24.17 |
| CDX82615 | Canola | nucleus | 20.31 | 24.01 |
| CDX77992 | Canola | nucleus | 16.72 | 23.69 |
| CDX73734 | Canola | nucleus | 16.95 | 23.59 |
| CDX87081 | Canola | nucleus | 13.92 | 23.22 |
| CDY04477 | Canola | nucleus | 17.96 | 22.25 |
| CDX71474 | Canola | nucleus | 17.73 | 21.98 |
| CDX84637 | Canola | cytosol | 16.5 | 21.91 |
| CDX79570 | Canola | cytosol | 16.84 | 21.77 |
| CDX83412 | Canola | nucleus | 15.71 | 20.8 |
| CDX80528 | Canola | nucleus | 16.95 | 20.6 |
| CDX88193 | Canola | nucleus | 16.95 | 20.49 |
| CDX71821 | Canola | nucleus | 15.94 | 20.0 |
| CDY41178 | Canola | nucleus | 15.82 | 19.56 |
| CDY42691 | Canola | nucleus | 15.71 | 19.36 |
| CDX95620 | Canola | nucleus | 14.81 | 18.99 |
| CDY61085 | Canola | nucleus | 15.82 | 18.9 |
| CDY52975 | Canola | nucleus | 15.82 | 18.88 |
| CDY56992 | Canola | nucleus | 15.38 | 18.84 |
| CDY29526 | Canola | peroxisome | 19.64 | 15.23 |
Protein Annotations
| EnsemblPlants:CDY08177 | EnsemblPlantsGene:GSBRNA2T00125478001 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF8 | PFAM:PF04782 | PFAM:PF04783 | ProteinID:CDY08177 | ProteinID:CDY08177.1 | SEG:seg |
| UniParc:UPI0004EE3DC7 | UniProt:A0A078F4Z5 | MapMan:35.1 | : | : | : |
Description
BnaA06g15490DBnaA06g15490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F4Z5]
Coordinates
chrLK031983:-:863736..866838
Molecular Weight (calculated)
99674.2 Da
IEP (calculated)
6.190
GRAVY (calculated)
-0.747
Length
891 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCGGSKVDD QPLVILCRER KELIKAASYH RSALAAAHLA YFQSLCDVGD SIKRFVDEEL VLPGSNTNSS PPDSPVLTLP SDQGKKKHKI SSSSTSVSHS
101: LVQEDEEDDG QGSHLHLSSG SDFDSGSESG SDDSLGHHHI HIESSPKVKK EQPLPETYPP GYPPSYPPSY PPGYQPGYSS GYQYPGQGWG FMGENPNPYQ
201: GMYFMKKSAP PSRPVVFQPE NHRVENGQWP QENGYGYSNA GYYGYPEQQR RAAPPSPARP PPSPPTVSTW DFLNVFDTYD YNRAGAGESS GFYPAASGVK
301: SNSSSLDSRE VREREGIPEL EDETEQETLK QSKRNSVEKM KEHIPENEPS KWSQLDERKI KKRGGDSGEG TSREVPMVES SFSSKTVSSF TSSEEGSEFH
401: HVNEGEERSS SHGHEAVARK SVGEVEEEYV RKKGVSFELE ENIAATSFDV ESSKISSLSA LSVHATRDLR EVAKEIKSEF EVASSHGKEV AVLLEVSKLP
501: YQQKSSGLKV IFSRIMSSRS QPQPSIRLTS RILKIAKSYN VQDVPEGFTA NLSSTLEKLY AWEKKLYKEV KDEEKLRVIY EEKCKTLKKL DSLGAESSKI
601: DTTRAAIRKL LTKLDVCIRS VDSISSRIHK LRDEELQPQL TQLIHGLIRM WRSMLKCHQK QFQAIMESKV RSLRANTGLQ RDSGLKAILD LEMELREWCI
701: SFNDWVNTQK LYVESLNGWL SRCLHYEPES TEDGVAPFSP SRVGAPHVFV ICKDWQEAME RISGDNVTNA MEGFATSLHE LWERQDEEQR QRVKAEYQLQ
801: DGGASSERSV VLSESGRISA LDDLKVDLDS MRKKLEEERA RHKETIKLVN NAASSSLQSG LVPIFEALGN FTSQVVKAHE HVRFQQPQSS S
101: LVQEDEEDDG QGSHLHLSSG SDFDSGSESG SDDSLGHHHI HIESSPKVKK EQPLPETYPP GYPPSYPPSY PPGYQPGYSS GYQYPGQGWG FMGENPNPYQ
201: GMYFMKKSAP PSRPVVFQPE NHRVENGQWP QENGYGYSNA GYYGYPEQQR RAAPPSPARP PPSPPTVSTW DFLNVFDTYD YNRAGAGESS GFYPAASGVK
301: SNSSSLDSRE VREREGIPEL EDETEQETLK QSKRNSVEKM KEHIPENEPS KWSQLDERKI KKRGGDSGEG TSREVPMVES SFSSKTVSSF TSSEEGSEFH
401: HVNEGEERSS SHGHEAVARK SVGEVEEEYV RKKGVSFELE ENIAATSFDV ESSKISSLSA LSVHATRDLR EVAKEIKSEF EVASSHGKEV AVLLEVSKLP
501: YQQKSSGLKV IFSRIMSSRS QPQPSIRLTS RILKIAKSYN VQDVPEGFTA NLSSTLEKLY AWEKKLYKEV KDEEKLRVIY EEKCKTLKKL DSLGAESSKI
601: DTTRAAIRKL LTKLDVCIRS VDSISSRIHK LRDEELQPQL TQLIHGLIRM WRSMLKCHQK QFQAIMESKV RSLRANTGLQ RDSGLKAILD LEMELREWCI
701: SFNDWVNTQK LYVESLNGWL SRCLHYEPES TEDGVAPFSP SRVGAPHVFV ICKDWQEAME RISGDNVTNA MEGFATSLHE LWERQDEEQR QRVKAEYQLQ
801: DGGASSERSV VLSESGRISA LDDLKVDLDS MRKKLEEERA RHKETIKLVN NAASSSLQSG LVPIFEALGN FTSQVVKAHE HVRFQQPQSS S
001: MGCGGSKVDD QPLVILCRER KQLIKAASHH RCALAAAHLS YFQSLCDVGD SIKRFVDEEL VLVGTSSSSS PDSPVLTLPS DEGKPHKHKI SSSSTSVSHS
101: VIEDDDEGEG EDQHLHLSSG SELDSGSESG SDDSLGHIHI ETSPKVKEKE TRLPENYQPG YQSGYQSGYQ PGFTPGYQYQ PGYSAGYQYP VEGWGFMGEN
201: PNLNPYPNPN QNPGMYFMKK SVQPSRPVVF QPENHRVENG QWLPENGVGY SNYYPGNANT GYFGYPEQRR EPPSPVRPTP APPSPPRISS WDFLNVFDTY
301: DYNRAGGGES SGAGAGFFPA MGGGKSNSSS PDSREVRERE GIPELEEETE QEVIFGQTFK HMKRKGIEKV KEQHRQENEI HERKIKKRGD SGEGTSRAVP
401: VVERATESSF GSKTVSSFSS SEEESEFHHV NDGEGKSSSN DLGGHETVAT KSVGEVEEEY VRKKGVSFEL DENVTTSFDV ESSKISSLSA LSVHATRDLR
501: EVVKEIKSEF EVASSHGKEV AVLLEVSKLP YQQKSSGLKV IFSRIMYLVA PSTVSSRSQP QPSIRLTSRI LKIAKSYNGQ DVREGLTGNL SATLEQLYAW
601: EKKLYKEVKD EEKLRVVYEE KCRTLKKLDS LGAESSKIDT TRAAIRKLLT KLDVCIRSVD SISSRIHKLR DEELQPQLTQ LIHGLIRMWR SMLKCHQKQF
701: QAIMESKVRS LRANTGLQRD SGLKAILDLE MELREWCISF NDWVNTQKSY VESLNGWLSR CLHYEPESTE DGIAPFSPSR VGAPQVFVIC KDWQEAMARI
801: SGENVSNAMQ GFASSLHELW ERQDEEQRQR VKAEYVSHDF EKRLNDLRME RARVRMRNDQ LQDGASEKSV VLSESGISAL DDLKVDLDSM RKKLEEERAR
901: HKETIKLVNN AASSSLQAGL VPIFEALGNF TSQVVKAHED VRFQQQQQPE SED
101: VIEDDDEGEG EDQHLHLSSG SELDSGSESG SDDSLGHIHI ETSPKVKEKE TRLPENYQPG YQSGYQSGYQ PGFTPGYQYQ PGYSAGYQYP VEGWGFMGEN
201: PNLNPYPNPN QNPGMYFMKK SVQPSRPVVF QPENHRVENG QWLPENGVGY SNYYPGNANT GYFGYPEQRR EPPSPVRPTP APPSPPRISS WDFLNVFDTY
301: DYNRAGGGES SGAGAGFFPA MGGGKSNSSS PDSREVRERE GIPELEEETE QEVIFGQTFK HMKRKGIEKV KEQHRQENEI HERKIKKRGD SGEGTSRAVP
401: VVERATESSF GSKTVSSFSS SEEESEFHHV NDGEGKSSSN DLGGHETVAT KSVGEVEEEY VRKKGVSFEL DENVTTSFDV ESSKISSLSA LSVHATRDLR
501: EVVKEIKSEF EVASSHGKEV AVLLEVSKLP YQQKSSGLKV IFSRIMYLVA PSTVSSRSQP QPSIRLTSRI LKIAKSYNGQ DVREGLTGNL SATLEQLYAW
601: EKKLYKEVKD EEKLRVVYEE KCRTLKKLDS LGAESSKIDT TRAAIRKLLT KLDVCIRSVD SISSRIHKLR DEELQPQLTQ LIHGLIRMWR SMLKCHQKQF
701: QAIMESKVRS LRANTGLQRD SGLKAILDLE MELREWCISF NDWVNTQKSY VESLNGWLSR CLHYEPESTE DGIAPFSPSR VGAPQVFVIC KDWQEAMARI
801: SGENVSNAMQ GFASSLHELW ERQDEEQRQR VKAEYVSHDF EKRLNDLRME RARVRMRNDQ LQDGASEKSV VLSESGISAL DDLKVDLDSM RKKLEEERAR
901: HKETIKLVNN AASSSLQAGL VPIFEALGNF TSQVVKAHED VRFQQQQQPE SED
Arabidopsis Description
DUF630 family protein, putative (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q9XI02]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.