Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400045246 | Potato | mitochondrion | 24.95 | 96.93 |
| VIT_18s0001g02480.t01 | Wine grape | nucleus | 43.29 | 56.28 |
| KRH64648 | Soybean | cytosol | 41.22 | 49.94 |
| KRH53256 | Soybean | cytosol | 41.12 | 49.52 |
| CDY04672 | Canola | nucleus | 41.72 | 48.51 |
| CDY08177 | Canola | nucleus | 42.6 | 48.48 |
| Bra017947.1-P | Field mustard | nucleus | 43.49 | 48.09 |
| AT1G77500.1 | Thale cress | nucleus | 41.12 | 47.44 |
| AT1G21740.1 | Thale cress | cytosol | 44.58 | 47.43 |
| GSMUA_Achr3P22040_001 | Banana | cytosol | 31.66 | 46.79 |
| Bra015667.1-P | Field mustard | nucleus | 37.87 | 45.99 |
| CDX88372 | Canola | nucleus | 37.28 | 45.76 |
| CDY41788 | Canola | nucleus | 38.17 | 45.42 |
| GSMUA_Achr9P08510_001 | Banana | nucleus | 31.07 | 40.28 |
| CDX87516 | Canola | nucleus | 17.16 | 38.67 |
| Os01t0960200-00 | Rice | nucleus | 10.16 | 38.43 |
| GSMUA_Achr3P19020_001 | Banana | cytosol | 30.37 | 37.33 |
| TraesCS1B01G275500.1 | Wheat | nucleus | 31.07 | 35.35 |
| TraesCS1A01G264800.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 31.07 | 35.31 |
| TraesCS1D01G265000.1 | Wheat | nucleus | 31.07 | 35.08 |
| Os05t0425000-00 | Rice | nucleus | 30.57 | 35.03 |
| EES19545 | Sorghum | nucleus | 30.57 | 34.37 |
| Zm00001d038223_P001 | Maize | cytosol | 30.57 | 34.18 |
| Solyc10g074470.1.1 | Tomato | cytosol | 26.92 | 34.0 |
| Solyc01g112050.2.1 | Tomato | nucleus | 28.5 | 32.47 |
| Zm00001d011823_P002 | Maize | plastid | 27.42 | 30.96 |
| TraesCS3A01G503100.1 | Wheat | cytosol | 22.49 | 30.81 |
| HORVU3Hr1G110830.5 | Barley | cytosol, nucleus | 21.1 | 30.79 |
| KXG34164 | Sorghum | plastid | 27.61 | 30.17 |
| TraesCS3D01G509700.1 | Wheat | plastid | 27.32 | 30.11 |
| TraesCS3B01G566500.1 | Wheat | plastid | 27.71 | 29.93 |
| Solyc01g111740.2.1 | Tomato | cytosol | 19.63 | 27.3 |
| Solyc07g047830.2.1 | Tomato | nucleus | 20.22 | 26.87 |
| Solyc02g083610.2.1 | Tomato | nucleus | 16.47 | 26.22 |
| Solyc04g054880.2.1 | Tomato | nucleus | 16.47 | 23.29 |
| Solyc03g120140.2.1 | Tomato | cytosol | 6.51 | 23.0 |
| Solyc09g007100.2.1 | Tomato | nucleus | 15.88 | 21.07 |
| Solyc08g068100.2.1 | Tomato | cytosol | 14.89 | 20.83 |
| Solyc01g090270.2.1 | Tomato | nucleus | 16.67 | 19.29 |
Protein Annotations
| EnsemblPlants:Solyc06g060270.2.1 | EnsemblPlantsGene:Solyc06g060270.2 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF8 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | UniParc:UPI0002766150 | UniProt:K4C6K8 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6:+:38246435..38258611
Molecular Weight (calculated)
113061.0 Da
IEP (calculated)
6.672
GRAVY (calculated)
-0.772
Length
1014 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTGGGGKVVR KVEMGCNESK AVDTELVIRC RERKELIKAA ANYRYALAAA HVSYFHSLKD VGDALRKFVD EELIVGSSSS SFSTPSSPSL ILPDERKIGS
0101: NRSNASGNTH HKHKSSGSSI SISSSDSSIS RFHDEDEPVH DHGHLHLSSD SSDDEHQNLP QKGHRNVHGH NENRGGHRNL QQDYEQSGRN HGNVYEDYEG
0201: RNMVESGESS ISPYSQPGWG PGGLPYGMMM NHEAPPQGYW DPFYGMNPQY QVPWGGQPFG GNPNTYAYYM KKSSPVMKTV FHEADPVPTG YSNSYWSYPN
0301: DNGGYFGYPM APSIGEMGSQ SNQGKKPSPP KEPPPPPSAN VSAWDYFNPF EGVESGYSAY YPHKQNSSAS VSSSPNSTEV REREGIPDLE EETETEMYKE
0401: YHKGKKLSDE TKTKRGETNS SRSSDSGRKS MSSMPHGIDL RGVAGPSSMG SSKPDSSLHN LDGSSSSRGV KSEGSGGRAK PISTMYDSSS HISSVEPSHS
0501: SGGTGSIDIT EEKSNFETLV SGSSGDVHMK KKGVTFEVDE MSKNEIESPR SSSLTTSHAH GTRDLHEVVA EIRDEFEIAS SYGREVALML EVGKLPYQPT
0601: FVKELLSRIL YMIVPSMSVS DTATVQSIRL AAKTRKLAKS YFEDVGQDND VMPCNLSSTF DELYEWEKKL YKEVKDEEKL RMIYEKQCKR LRSLDEQGAE
0701: SSKIDATQAC IRKLLTKLNV CIKAIDAISS RIHKLRDEEL QPQIGELIHG LVRMWRSMLN CHQKQFQAVM ESKTRALRAN TGFQRDSSLR ATLELEVQLL
0801: SWCSHFNDWI CSQKSYVESL NGWLLRCLTY EPEETPDGPV PFSPGRLGAP PVFVICNDWS QAVEAISENR VAIAMNDFAS NLRQLWERQD EEQRQRIKAE
0901: YLSKDYKKRL TMLQQRRGGS RHEQDAMSNR SHIIVPSEKG ISPLDDLKVD LDSFKKKLVE ERTKHKDAIK LVHDAASSSL QGGLLPIFKA LENFTSEALR
1001: AHEQVRLQSV RDSS
0101: NRSNASGNTH HKHKSSGSSI SISSSDSSIS RFHDEDEPVH DHGHLHLSSD SSDDEHQNLP QKGHRNVHGH NENRGGHRNL QQDYEQSGRN HGNVYEDYEG
0201: RNMVESGESS ISPYSQPGWG PGGLPYGMMM NHEAPPQGYW DPFYGMNPQY QVPWGGQPFG GNPNTYAYYM KKSSPVMKTV FHEADPVPTG YSNSYWSYPN
0301: DNGGYFGYPM APSIGEMGSQ SNQGKKPSPP KEPPPPPSAN VSAWDYFNPF EGVESGYSAY YPHKQNSSAS VSSSPNSTEV REREGIPDLE EETETEMYKE
0401: YHKGKKLSDE TKTKRGETNS SRSSDSGRKS MSSMPHGIDL RGVAGPSSMG SSKPDSSLHN LDGSSSSRGV KSEGSGGRAK PISTMYDSSS HISSVEPSHS
0501: SGGTGSIDIT EEKSNFETLV SGSSGDVHMK KKGVTFEVDE MSKNEIESPR SSSLTTSHAH GTRDLHEVVA EIRDEFEIAS SYGREVALML EVGKLPYQPT
0601: FVKELLSRIL YMIVPSMSVS DTATVQSIRL AAKTRKLAKS YFEDVGQDND VMPCNLSSTF DELYEWEKKL YKEVKDEEKL RMIYEKQCKR LRSLDEQGAE
0701: SSKIDATQAC IRKLLTKLNV CIKAIDAISS RIHKLRDEEL QPQIGELIHG LVRMWRSMLN CHQKQFQAVM ESKTRALRAN TGFQRDSSLR ATLELEVQLL
0801: SWCSHFNDWI CSQKSYVESL NGWLLRCLTY EPEETPDGPV PFSPGRLGAP PVFVICNDWS QAVEAISENR VAIAMNDFAS NLRQLWERQD EEQRQRIKAE
0901: YLSKDYKKRL TMLQQRRGGS RHEQDAMSNR SHIIVPSEKG ISPLDDLKVD LDSFKKKLVE ERTKHKDAIK LVHDAASSSL QGGLLPIFKA LENFTSEALR
1001: AHEQVRLQSV RDSS
001: MGCGGSKVDD QPLVILCRER KQLIKAASHH RCALAAAHLS YFQSLCDVGD SIKRFVDEEL VLVGTSSSSS PDSPVLTLPS DEGKPHKHKI SSSSTSVSHS
101: VIEDDDEGEG EDQHLHLSSG SELDSGSESG SDDSLGHIHI ETSPKVKEKE TRLPENYQPG YQSGYQSGYQ PGFTPGYQYQ PGYSAGYQYP VEGWGFMGEN
201: PNLNPYPNPN QNPGMYFMKK SVQPSRPVVF QPENHRVENG QWLPENGVGY SNYYPGNANT GYFGYPEQRR EPPSPVRPTP APPSPPRISS WDFLNVFDTY
301: DYNRAGGGES SGAGAGFFPA MGGGKSNSSS PDSREVRERE GIPELEEETE QEVIFGQTFK HMKRKGIEKV KEQHRQENEI HERKIKKRGD SGEGTSRAVP
401: VVERATESSF GSKTVSSFSS SEEESEFHHV NDGEGKSSSN DLGGHETVAT KSVGEVEEEY VRKKGVSFEL DENVTTSFDV ESSKISSLSA LSVHATRDLR
501: EVVKEIKSEF EVASSHGKEV AVLLEVSKLP YQQKSSGLKV IFSRIMYLVA PSTVSSRSQP QPSIRLTSRI LKIAKSYNGQ DVREGLTGNL SATLEQLYAW
601: EKKLYKEVKD EEKLRVVYEE KCRTLKKLDS LGAESSKIDT TRAAIRKLLT KLDVCIRSVD SISSRIHKLR DEELQPQLTQ LIHGLIRMWR SMLKCHQKQF
701: QAIMESKVRS LRANTGLQRD SGLKAILDLE MELREWCISF NDWVNTQKSY VESLNGWLSR CLHYEPESTE DGIAPFSPSR VGAPQVFVIC KDWQEAMARI
801: SGENVSNAMQ GFASSLHELW ERQDEEQRQR VKAEYVSHDF EKRLNDLRME RARVRMRNDQ LQDGASEKSV VLSESGISAL DDLKVDLDSM RKKLEEERAR
901: HKETIKLVNN AASSSLQAGL VPIFEALGNF TSQVVKAHED VRFQQQQQPE SED
101: VIEDDDEGEG EDQHLHLSSG SELDSGSESG SDDSLGHIHI ETSPKVKEKE TRLPENYQPG YQSGYQSGYQ PGFTPGYQYQ PGYSAGYQYP VEGWGFMGEN
201: PNLNPYPNPN QNPGMYFMKK SVQPSRPVVF QPENHRVENG QWLPENGVGY SNYYPGNANT GYFGYPEQRR EPPSPVRPTP APPSPPRISS WDFLNVFDTY
301: DYNRAGGGES SGAGAGFFPA MGGGKSNSSS PDSREVRERE GIPELEEETE QEVIFGQTFK HMKRKGIEKV KEQHRQENEI HERKIKKRGD SGEGTSRAVP
401: VVERATESSF GSKTVSSFSS SEEESEFHHV NDGEGKSSSN DLGGHETVAT KSVGEVEEEY VRKKGVSFEL DENVTTSFDV ESSKISSLSA LSVHATRDLR
501: EVVKEIKSEF EVASSHGKEV AVLLEVSKLP YQQKSSGLKV IFSRIMYLVA PSTVSSRSQP QPSIRLTSRI LKIAKSYNGQ DVREGLTGNL SATLEQLYAW
601: EKKLYKEVKD EEKLRVVYEE KCRTLKKLDS LGAESSKIDT TRAAIRKLLT KLDVCIRSVD SISSRIHKLR DEELQPQLTQ LIHGLIRMWR SMLKCHQKQF
701: QAIMESKVRS LRANTGLQRD SGLKAILDLE MELREWCISF NDWVNTQKSY VESLNGWLSR CLHYEPESTE DGIAPFSPSR VGAPQVFVIC KDWQEAMARI
801: SGENVSNAMQ GFASSLHELW ERQDEEQRQR VKAEYVSHDF EKRLNDLRME RARVRMRNDQ LQDGASEKSV VLSESGISAL DDLKVDLDSM RKKLEEERAR
901: HKETIKLVNN AASSSLQAGL VPIFEALGNF TSQVVKAHED VRFQQQQQPE SED
Arabidopsis Description
DUF630 family protein, putative (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q9XI02]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.