CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42005	Canola	nucleus	95.7	94.44
AT4G39790.1	Thale cress	plastid	82.78	76.1
KRG97595	Soybean	cytosol	52.81	48.26
VIT_00s1403g00010.t01	Wine grape	nucleus	58.77	48.1
PGSC0003DMT400053154	Potato	nucleus	56.62	47.63
Solyc04g054880.2.1	Tomato	nucleus	56.29	47.42
GSMUA_Achr2P22150_001	Banana	cytosol	45.53	46.61
KRH59380	Soybean	nucleus	56.29	46.26
KRH43215	Soybean	nucleus	56.62	46.15
Os05t0172300-01	Rice	nucleus	46.85	39.2
EES08807	Sorghum	nucleus	46.03	38.66
GSMUA_Achr11P...	Banana	cytosol	42.55	38.59
Os05t0255800-01	Rice	nucleus	29.47	37.71
TraesCS4A01G376900.1	Wheat	nucleus	45.86	37.64
HORVU7Hr1G018230.3	Barley	nucleus	45.86	37.53
TraesCS7D01G074000.2	Wheat	nucleus	45.53	37.41
Zm00001d048891_P002	Maize	nucleus	46.03	37.27
Os09t0368900-00	Rice	nucleus	36.92	32.51
TraesCS5A01G189900.1	Wheat	cytosol	37.75	32.07
TraesCS5D01G201000.1	Wheat	nucleus	37.25	31.65
HORVU5Hr1G058240.4	Barley	nucleus	37.09	31.59
TraesCS5B01G193300.1	Wheat	cytosol	37.09	31.07
CDX71474	Canola	nucleus	36.59	30.74
CDY04477	Canola	nucleus	36.59	30.74
CDY28162	Canola	cytosol	19.7	29.46
CDY66508	Canola	cytosol, nucleus	19.37	27.66
CDX87081	Canola	nucleus	20.53	23.22
CDX68628	Canola	nucleus	25.66	22.93
CDX77992	Canola	nucleus	22.02	21.14
CDX76322	Canola	cytosol	24.67	21.07
CDX73734	Canola	nucleus	22.02	20.78
CDY17530	Canola	cytosol	24.34	20.7
CDX82615	Canola	nucleus	25.5	20.42
CDX88008	Canola	nucleus	24.17	20.42
CDX69122	Canola	nucleus	25.33	20.37
CDY39136	Canola	nucleus	25.33	20.32
CDY07877	Canola	cytosol	24.01	20.28
CDY31475	Canola	nucleus	19.87	19.93
CDY28161	Canola	nucleus	6.62	19.51
CDX80528	Canola	nucleus	23.18	19.1
CDX75484	Canola	cytosol, plastid	21.85	18.94
CDX83412	Canola	nucleus	21.03	18.87
CDX88193	Canola	nucleus	22.85	18.72
CDX84637	Canola	cytosol	20.53	18.48
CDX79570	Canola	cytosol	20.7	18.14
CDX88372	Canola	nucleus	24.5	17.92
CDX95620	Canola	nucleus	20.53	17.84
CDY41788	Canola	nucleus	25.17	17.84
CDY04672	Canola	nucleus	25.66	17.78
CDY08177	Canola	nucleus	26.16	17.73
CDY41178	Canola	nucleus	21.03	17.61
CDX71821	Canola	nucleus	20.7	17.61
CDY56992	Canola	nucleus	20.7	17.19
CDY42691	Canola	nucleus	20.36	17.01
CDY52975	Canola	nucleus	20.36	16.47
CDY61085	Canola	nucleus	20.2	16.35
CDY18335	Canola	cytosol	18.05	15.42
CDY42454	Canola	cytosol	17.72	15.26
CDX87516	Canola	nucleus	8.44	11.33
CDY29526	Canola	peroxisome	19.87	10.44

Protein Annotations

EnsemblPlants:CDX69386	EnsemblPlantsGene:GSBRNA2T00131241001	InterPro:DUF630	InterPro:DUF632	ncoils:Coil	PANTHER:PTHR21450
PANTHER:PTHR21450:SF4	PFAM:PF04782	PFAM:PF04783	ProteinID:CDX69386	ProteinID:CDX69386.1	SEG:seg
UniParc:UPI0004EEA205	MapMan:35.1	:	:	:	:

Description

BnaC01g00670D

Coordinates

chrLK031789:+:4473761..4476634

Molecular Weight (calculated)

68930.4 Da

IEP (calculated)

8.176

GRAVY (calculated)

-0.717

Length

604 amino acids

Sequence
(BLAST)

001: MPPSILEKMG CSNSKEASTK EKKKKNEPLL LCKERKRFVK RAIDSRCALA AAHVSYVRSL RNIGACLRQY AEAETVAAVA SSPSHNSSSY PDDDSVDSPL
101: SRNSNPLDMP ELSPPPPRPR RPETSSWDYF DTCDEFDSFR LTDNASVVGL EKQSKQSNAE DFKTEQRKQS SEDDGEREDP SEFITHRAKD FVSSMKDIEH
201: KFFRASESGK EVSRMLEATK IRVRFADDTT TGKGNSVAFL SALKRACCRG KKSHSPVFKE PLHQRVTKVI VWKRTSSSRS STSRNPLIED HHDDESGSDF
301: TQEFCMISGS HSSSLDRLYA WERKLYDEVK ASEMIRKEYD RKCEQLRNQF TKDHSAKAMD KTRAAAKDLH SRIRVAIQSV DLISKRIERI RDEELQPQLL
401: ELLQGLIRMW KAMLECHHSQ YITISLAYHC RNTSKTGPEN ALKRRIWSEL LEETECFGLS FADLVNSMTS YVEALNGWLH NCVLLPQERS TRNRRPWSPR
501: RVLAPPIFVV CRDWSAGMKS LPSDELSRSI KEFSTDMEML GEEKEDSVLV SEDLSTVHSS LAKLLERLKK FSEASLKMYE DVKVKSEEAV VAYTNHSNCG
601: RPLL

Best Arabidopsis Sequence Match ( AT4G39790.1 )
(BLAST)

001: MGHSILEKMG CSNSKASMNK KNEPLHLCKE RKRFVKQAMD SRCALAAAHV SYIRSLRNIG ACLRQYAEAE TAHESSPSLT ATEPEKSPSH NSSYPDDSVD
101: SPLSHNSNPN PNPKPLFNLS YMKTETASST VTFTINPLSD GDDDLEVTMP AFSPPPPPRP RRPETSSWDY FDTCDDFDSF RFVGLSEQTE IDSECDAAVI
201: GLEKITSQGN VAKSGSETLQ DSSFKTKQRK QSCEDNDERE DPSEFITHRA KDFVSSMKDI EHKFFRASES GREVSRMLEV NKIRVGFADM TGKGNSIAFL
301: AALKRACCRG KSYSPVSQEP LSHQVTKVIV WKRTSSSRSS TSRNPLIQTS KEDHDDESGS DFIEEFCMIS GSHSSSLDRL YAWERKLYDE VKASEMIRKE
401: YDRKCEQLRN QFAKDHSAKS MDKTRAAAKD LHSRIRVAIQ SVESISKRIE RIRDDELHPQ LLEFLQGLIR MWKAMLECHH TQYITISLAY HCRHSSKTAH
501: ESVLKRRILA ELLEETECFG LSFVDLVHSM ASYVEALNGW LHNCVLLPQE RSTRNRRPWS PRRVLAPPIF VLCRDWSAGI KTLPSDELSG SIKGFSLDME
601: MLGEEKGGSL LVSDLSSVHS SLAKLLERLK KFSEASLKMY EDVKVKSEAA RVAYTNK

Arabidopsis Description

BZIP transcription factor, putative (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q5XV54]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.