Factsheet for TraesCS2A01G405700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G402400.1	Wheat	cytosol	94.48	94.73
TraesCS2B01G423500.1	Wheat	cytosol	94.48	93.86
HORVU2Hr1G096140.2	Barley	cytosol	45.34	92.25
HORVU2Hr1G096180.1	Barley	cytosol	70.56	87.75
Os04t0562800-00	Rice	cytosol, mitochondrion	49.28	68.43
KXG26898	Sorghum	cytosol	65.31	62.67
Zm00001d026130_P001	Maize	nucleus	63.99	61.72
Zm00001d002669_P002	Maize	cytosol	63.86	61.6
TraesCS6A01G253600.1	Wheat	nucleus	55.45	55.31
GSMUA_Achr11P...	Banana	mitochondrion	38.11	43.15
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	33.64	38.85
CDX76322	Canola	cytosol	32.85	35.36
CDY17530	Canola	cytosol	32.85	35.21
CDX88008	Canola	nucleus	32.98	35.1
Bra009665.1-P	Field mustard	cytosol	32.59	35.08
AT2G17110.1	Thale cress	nucleus	33.38	34.65
Bra020807.1-P	Field mustard	nucleus	34.3	34.21
CDY07877	Canola	cytosol	32.06	34.13
CDX75484	Canola	cytosol, plastid	30.88	33.72
AT4G35240.1	Thale cress	nucleus	37.06	32.6
CDX69122	Canola	nucleus	32.06	32.49
Bra011597.1-P	Field mustard	nucleus	35.35	32.18
VIT_03s0038g03260.t01	Wine grape	cytosol	33.9	31.77
KRH14028	Soybean	cytosol	30.22	31.38
Solyc10g074470.1.1	Tomato	cytosol	32.85	31.13
PGSC0003DMT400043330	Potato	mitochondrion	32.85	30.98
TraesCS5A01G347200.1	Wheat	nucleus	38.76	30.76
KRH74089	Soybean	cytosol	31.41	30.52
Solyc01g112050.2.1	Tomato	nucleus	35.48	30.34
PGSC0003DMT400048013	Potato	nucleus	35.48	29.57
KRH60958	Soybean	cytosol	25.36	29.15
KRH51633	Soybean	cytosol	25.36	29.07
VIT_18s0001g00170.t01	Wine grape	cytosol	27.2	27.9
TraesCS7A01G273600.1	Wheat	cytosol, mitochondrion, nucleus	33.9	27.51
CDY31475	Canola	nucleus	21.16	26.74
AT1G20530.1	Thale cress	cytosol	21.55	26.71
TraesCS1A01G264800.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, nucleus	28.12	23.99
TraesCS5A01G335700.1	Wheat	cytosol	21.68	22.09
TraesCS3A01G503100.1	Wheat	cytosol	20.5	21.08
TraesCS6A01G154500.2	Wheat	cytosol	16.29	19.65
TraesCS6A01G243100.1	Wheat	mitochondrion	14.19	19.08
TraesCS1A01G218200.1	Wheat	nucleus	18.53	18.34
TraesCS3A01G210200.1	Wheat	nucleus	16.69	18.22
TraesCS4A01G376900.1	Wheat	nucleus	17.35	17.93
TraesCS2A01G099100.1	Wheat	nucleus	11.83	16.57
TraesCS7A01G252800.1	Wheat	nucleus	18.4	16.36
TraesCS5A01G189900.1	Wheat	cytosol	15.11	16.17
TraesCS4A01G128000.1	Wheat	cytosol	17.08	15.95
TraesCS1A01G247500.1	Wheat	nucleus	16.16	15.51
TraesCS2A01G155900.1	Wheat	nucleus	14.72	15.36
CDY29526	Canola	peroxisome	21.68	14.36
TraesCS3A01G198900.1	Wheat	nucleus	15.24	14.3
Bra025823.1-P	Field mustard	peroxisome	21.55	14.29

Protein Annotations

EnsemblPlants:TraesCS2A01G405700.1	EnsemblPlantsGene:TraesCS2A01G405700	InterPro:DUF630	InterPro:DUF632	ncoils:Coil	PANTHER:PTHR21450
PANTHER:PTHR21450:SF20	PFAM:PF04782	PFAM:PF04783	SEG:seg	MapMan:35.1	:

Description

No Description!

Coordinates

chr2A:-:661451768..661456026

Molecular Weight (calculated)

84192.9 Da

IEP (calculated)

9.036

GRAVY (calculated)

-0.494

Length

761 amino acids

Sequence
(BLAST)

001: MGCKGSKLDS QEAVALCRGR ADLIAAAVRH RYALADAHAA LAGSYEALAA PLHLLLRLQA EPPRLSLPED RKGGGRRGGM PLPDRRHSSH VDFEPTSSSG
101: SDSASSPPGS PPRRVPEQLL PQPSYYGYAP EPAFAYPAPP QSTMQFYYAR SRPPPASVAV AQRPPVSERA RYGDFDAATA GGGYPQYYAY GGEPAAAAPP
201: PPPPQRAAAP APAPLPPPRE SSSWDFLNVF ENYDDSYDGY YYNPTTTAAA AAAAYTPSRS SREVREEEGI PELEEDDEET VVVKEMASEY STVGTGRSHR
301: GSFGPVNTIP EVDNRRNVQR RRPAYRNVAP LTREPPAQRV VGNAMDAATA VKTQLVRVAE AARELAPLLE VGRPSYQGRN SVYHAASSRM MSAISVAHLG
401: CKDEDMLGMV IGEEGKVVGS WSLSLTLEKL YFWERKLYGE VKAEEKMRLR LAKNSKRLKL LDQRGAEAHK VDATQNLLRK LSTKIRIAVR VIAKVSRKIN
501: KVRDEELVPQ VNTLIQGFAK MWQDKLHSYQ IQLQVISEAK NLASVTSGGN NSPGLAMELE LELIKWIINF SSWVSAHRNF VKSLNGWLAL CLNYEPQEAP
601: TYSPGRIGAP VIFVICNKWS QAMDRISEKD VVNAMQALVS SVRHLWEQQN LDQSERIVAV RERDKWMKML EKKALEINKE GDELNRKLAL VPGQQQSFQR
701: CPTIRTYEAH CIDGSSVHVN LRLLLQALES FAASSLEAFQ EIPRLDEETT RSSRGSSRVP R

Best Arabidopsis Sequence Match ( AT2G17110.1 )
(BLAST)

001: MGCSTSKLDD LPAVALCRDR CSFLEAAIHQ RYALSEAHVS YTQSLKAISH SLHQFINHHH RYNDSDSPKK AKPKMDSGSG HLDFDSDSDS DDDDDIDSLH
101: SSPLHHHLED DDSNPKSYLH MNYMKNSYMP PSLVYEQRPS SPQRVHFGES SSSSTSEYNP YLNSNYGSKL PPPPPSPPRE KVWDFLDPFD TYYTPYTPSR
201: DTRELRDELG VPDLEEDDVV VKEVHGKQKF VAAVSVEEPL GNSGASTSGG GGGGGKASLY QTRPSVSVEK EEMEHEVHIV EKKIVEDSGG DEVRKSKAAV
301: ARGGGGVRRG VPEVAKEIEA QFLRAAESGN EIAVMLEVGK HPYGRKNVSS KKLYEGTPSP SVVSSAQSST SKKAKAEASS SVTAPTYADI EAELALKSRN
401: LSSTLHKLHL WEKKLYDEVK AEEKMRVNHE KKLRKLKRMD ERGAENQKVD STRKLVRSLS TKIRIAIQVV DKISVTINKI RDEELWLQLN ELIQGLSKMW
501: KSMLECHKSQ CEAIKEARGL GPIRASKNFG GEHLEVTRTL GYELINWIVG FSSWVSAQKG FVRELNSWLM KCLFYEPEET PDGIVPFSPG RIGAPMIFVI
601: CNQWEQALDR ISEKEVIEAI RRFTTSVLHL WEQDRLATRE RIIGHGDPRN MDREEQRIQK EIQELEMKMV LVGPGEDNIV YQSDTSNESL QGSLQRIFEA
701: MERFTEESLK AYVDLLHRAE EEECDSRETD EED

Arabidopsis Description

Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G17110]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.