Factsheet for Bra036821.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77992	Canola	nucleus	97.81	99.52
CDX73734	Canola	nucleus	99.06	99.06
KRH28816	Soybean	cytosol	3.75	72.73
AT3G51290.2	Thale cress	cytosol	90.47	72.56
KRH76635	Soybean	cytosol	65.16	66.72
VIT_04s0023g03760.t01	Wine grape	mitochondrion	63.44	64.75
PGSC0003DMT400009224	Potato	nucleus	39.22	63.54
Solyc02g083610.2.1	Tomato	nucleus	61.41	61.7
KRH28815	Soybean	cytosol	43.44	61.5
GSMUA_Achr3P00690_001	Banana	nucleus	43.28	54.64
GSMUA_Achr1P26500_001	Banana	cytosol	44.22	53.7
KXG36086	Sorghum	nucleus	54.06	52.74
Zm00001d022626_P001	Maize	nucleus	52.97	52.15
TraesCS5D01G336000.1	Wheat	nucleus	54.06	52.03
Os09t0538700-01	Rice	nucleus	52.97	51.91
TraesCS5B01G330400.1	Wheat	nucleus	53.91	51.49
HORVU5Hr1G084030.15	Barley	nucleus	53.59	50.59
KRH08031	Soybean	cytosol	33.28	48.74
Bra007523.1-P	Field mustard	nucleus	35.31	31.26
Bra014497.1-P	Field mustard	nucleus	35.94	30.18
Bra022983.1-P	Field mustard	cytosol	31.56	29.32
Bra000365.1-P	Field mustard	nucleus	35.62	28.43
Bra009853.1-P	Field mustard	nucleus	26.56	23.13
Bra018963.1-P	Field mustard	nucleus	24.69	21.07
Bra011832.1-P	Field mustard	nucleus	21.88	20.38
Bra011166.1-P	Field mustard	nucleus	20.94	20.21
Bra020807.1-P	Field mustard	nucleus	23.28	19.53
Bra011597.1-P	Field mustard	nucleus	25.16	19.26
Bra012035.1-P	Field mustard	nucleus	21.09	18.72
Bra009665.1-P	Field mustard	cytosol	20.62	18.67
Bra015667.1-P	Field mustard	nucleus	22.97	17.6
Bra038839.1-P	Field mustard	nucleus	21.56	17.56
Bra017947.1-P	Field mustard	nucleus	24.22	16.9
Bra038563.1-P	Field mustard	nucleus	21.25	16.77
Bra002985.1-P	Field mustard	nucleus	18.75	16.57
Bra025823.1-P	Field mustard	peroxisome	21.09	11.76

Protein Annotations

EnsemblPlants:Bra036821.1	EnsemblPlants:Bra036821.1-P	EnsemblPlantsGene:Bra036821	InterPro:DUF630	InterPro:DUF632	ncoils:Coil
PANTHER:PTHR21450	PANTHER:PTHR21450:SF23	PFAM:PF04782	PFAM:PF04783	SEG:seg	SUPFAM:SSF101447
UniParc:UPI0002542C70	UniProt:M4F6W1	MapMan:35.1	:	:	:

Description

AT3G51290 (E=1e-149) | proline-rich family protein

Coordinates

chrA09:+:25606504..25608948

Molecular Weight (calculated)

71786.3 Da

IEP (calculated)

8.966

GRAVY (calculated)

-0.574

Length

640 amino acids

Sequence
(BLAST)

001: MGCCQSRIDR KEIVSRCKAR KRYLKHLVKA RQTLSVSHAL YLRSLRATGS SLVNFSSKET PLHLHHNPPS PSPLPPPPPP RPQQPPLSPS SETTWTSTTT
101: SSALPPPPPP PPPPPPQPSS TWDFWDPFIP PPPSSSEEEW EEETTTGTTT RTATGTASSV AAPTTAPTTA TPQGSSVVSG FSKDTTTTGS ELAVVVPRNS
201: KDLMEIIKEV DEYFLKAADS GAPLSSLLEI STSINATAFS AHAKGGKMYS NYECNLNPTS FWTKGFAPKL NEYRNSALVV GGNCIVGSHS STIDRLYAWE
301: KKLFQEVKNA ESIKMEHEKK VEQVRRLEMK RADYVKTEKA KKDVEKLESQ LTVSSQAIQS ASNEIIKIRE TELYPQLVEL IKGLMCMWRS MYESHQVQTH
401: IVQQLKYLNT IPSTEPTSEL HRQSTFQLEL EIQQWHHSFC NLVKAQRDYI QSLTGWLRLS LFQFSKNPLV RSSYESKIYS FCEEWHLAID RIPDKVASEG
501: INSFLTAVHG IVAQQAEEHK QKKRSDSMLK DFEKKAASLR GLESKYSPYS VPEGRKKNPV IEKRAKVEFL KGKAEEEKSK HEKAVSVTRA MTLNNLQMGF
601: PHVFQAMVGF SSVCMQAFES VYNQAKCIGE EQEEVKRLLP

Best Arabidopsis Sequence Match ( AT3G51290.3 )
(BLAST)

001: MGCCQSRIDS KEIVSRCKAR KRYLKHLVKA RQTLSVSHAL YLRSLRAVGS SLVHFSSKET PLHLHHNPPS PSPPPPPPPR PPPPPLSPGS ETTTWTTTTT
101: SSVLPPPPPP PPPPPPPSST WDFWDPFIPP PPSSSEEEWE EETTTATRTA TGTGSDAAVT TAPTTATPQA SSVVSGFSKD TMTTTTTGSE LAVVVSRNGK
201: DLMEIIKEVD EYFLKAADSG APLSSLLEIS TSITDFSGHS KSGKMYSSSN YECNLNPTSF WTRGFAPSKL SEYRNAGGVI GGNCIVGSHS STVDRLYAWE
301: KKLYQEVKYA ESIKMDHEKK VEQVRRLEMK RAEYVKTEKA KKDVEKLESQ LSVSSQAIQS ASNEIIKLRE TELYPQLVEL VKGLMCMWRS MYESHQVQTH
401: IVQQLKYLNT IPSTEPTSEL HRQSTLQLEL EVQQWHHSFC NLVKAQRDYI QSLTGWLRLS LFQFSKNPLV RSSYESKIYS FCEEWHLAID RIPDKVASEG
501: IKSFLTAVHG IVAQQADEHK QKKRTESMLK DFEKKSASLR ALESKYSPYS VPESRKKNPV IEKRVKVEML KGKAEEEKSK HEKSVSVTRA MTLNNLQMGF
601: PHVFQAMVGF SSVCMQAFES VYNQAKSIGE DQEEVKRLLP

Arabidopsis Description

Pyridoxal-phosphate-dependent serine hydroxymethyltransferase, putative (DUF632) [Source:UniProtKB/TrEMBL;Acc:F4J3B2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.