Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79570 | Canola | cytosol | 56.75 | 53.7 |
| CDX84637 | Canola | cytosol | 55.06 | 53.5 |
| Bra022983.1-P | Field mustard | cytosol | 56.13 | 53.12 |
| AT2G34670.2 | Thale cress | nucleus | 56.29 | 52.88 |
| KRH12768 | Soybean | cytosol | 48.47 | 50.32 |
| GSMUA_Achr5P00570_001 | Banana | cytosol | 50.77 | 49.55 |
| KRH37731 | Soybean | nucleus | 48.16 | 48.76 |
| GSMUA_Achr9P30410_001 | Banana | cytosol | 45.25 | 47.97 |
| Os01t0585600-01 | Rice | nucleus | 45.4 | 43.21 |
| Zm00001d011231_P001 | Maize | nucleus | 43.56 | 41.83 |
| EES00973 | Sorghum | nucleus | 44.33 | 41.17 |
| Zm00001d044312_P001 | Maize | nucleus | 43.87 | 40.8 |
| HORVU3Hr1G050880.1 | Barley | nucleus | 42.94 | 40.23 |
| TraesCS3B01G240800.1 | Wheat | nucleus | 43.1 | 40.2 |
| TraesCS3D01G213000.1 | Wheat | nucleus | 42.94 | 40.06 |
| TraesCS3A01G210200.1 | Wheat | nucleus | 42.33 | 39.6 |
| VIT_04s0023g03760.t01 | Wine grape | mitochondrion | 37.42 | 38.92 |
| VIT_09s0002g04590.t01 | Wine grape | nucleus | 25.61 | 27.29 |
| VIT_15s0021g01550.t01 | Wine grape | nucleus | 34.97 | 26.98 |
| VIT_04s0008g04200.t01 | Wine grape | cytosol | 26.23 | 24.19 |
| VIT_07s0031g02650.t01 | Wine grape | cytosol | 12.27 | 22.66 |
| VIT_00s0434g00010.t01 | Wine grape | nucleus | 24.39 | 22.33 |
| VIT_03s0038g02660.t01 | Wine grape | nucleus | 22.24 | 22.27 |
| VIT_00s0264g00010.t01 | Wine grape | nucleus | 24.39 | 21.93 |
| VIT_00s1403g00010.t01 | Wine grape | nucleus | 23.31 | 20.6 |
| VIT_06s0009g01610.t01 | Wine grape | nucleus | 11.66 | 19.95 |
| VIT_11s0103g00310.t01 | Wine grape | nucleus | 21.01 | 17.86 |
| VIT_03s0038g03260.t01 | Wine grape | cytosol | 21.78 | 17.49 |
| VIT_18s0001g02480.t01 | Wine grape | nucleus | 20.25 | 16.92 |
| VIT_18s0001g00170.t01 | Wine grape | cytosol | 18.71 | 16.44 |
| VIT_06s0009g01600.t01 | Wine grape | nucleus | 11.66 | 16.14 |
Protein Annotations
| EntrezGene:100249833 | wikigene:100249833 | MapMan:35.1 | ProteinID:CCB55841 | ProteinID:CCB55841.1 | ncoils:Coil |
| InterPro:DUF630 | InterPro:DUF632 | UniProt:F6HLW6 | EMBL:FN595992 | EntrezGene:LOC100249833 | wikigene:LOC100249833 |
| PFAM:PF04782 | PFAM:PF04783 | PANTHER:PTHR21450 | PANTHER:PTHR21450:SF21 | UniParc:UPI000198414D | ArrayExpress:VIT_10s0003g04480 |
| EnsemblPlantsGene:VIT_10s0003g04480 | EnsemblPlants:VIT_10s0003g04480.t01 | unigene:Vvi.8744 | RefSeq:XP_002274665 | RefSeq:XP_002274665.1 | RefSeq:XP_010655710.1 |
| RefSeq:XP_010655711.1 | RefSeq:XP_010655712.1 | RefSeq:XP_019078140.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr10:-:7822547..7836484
Molecular Weight (calculated)
74258.8 Da
IEP (calculated)
5.383
GRAVY (calculated)
-0.595
Length
652 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCAASRIDK EERVQVCKER KKLMKHLVGF RGEFADAQLA YLRALKNTGV TLRQFTESES LELENTPFGL VLPPSPPPPL PPSPPPPPPF SPDLRKFNNN
101: QKDEIAQEES IEIGEDDSCT PPPPPISSSH WEFWDPFSTS LPPREKNNAT AEEPVEEENW AETNTEFEEE DQEEEAVVNN GLHLLPEKPH TIELVDDNSS
201: MVSWHTKDTA DMAMVVWRSK KTLTGIVKEL DDYFLKASAG GNDIAVLMDI NRGDTFLQQD FKENKRKRCN SAKVFSALSW SWSSKSLQFA RDAAESSGPN
301: EPCMPGVHCI TLDKLYAEER RLYKEVKDEE ITKLLHERKS LLLQKQEEED QDWTKIEKTR SCVESLQSDM IALQQSISRT CSSILKLIDD ELYPQLVALT
401: SGLMHMWRTM YECHQVQKHI SQQVNHLTNH QIRDSTTDFH RQATAQLETE VTSWYNSFCK LMKSQQEYVR ALCRWIQLTE RLASDSQQSH CAPVVRTLCE
501: EWQLALDRFP DKVASEAIKN LLSAIHSIVL QQAEECNLLK KSEKLERRLQ KELNSLFELE NKLEGSIVGD THLSLSPKHP LSVKRTKTEA LRKRVEDAKA
601: KYLNSVQVSQ AMTVNNLQTS LPNVFQALMG FSSVCAQAFE AVHSYAKQAV LS
101: QKDEIAQEES IEIGEDDSCT PPPPPISSSH WEFWDPFSTS LPPREKNNAT AEEPVEEENW AETNTEFEEE DQEEEAVVNN GLHLLPEKPH TIELVDDNSS
201: MVSWHTKDTA DMAMVVWRSK KTLTGIVKEL DDYFLKASAG GNDIAVLMDI NRGDTFLQQD FKENKRKRCN SAKVFSALSW SWSSKSLQFA RDAAESSGPN
301: EPCMPGVHCI TLDKLYAEER RLYKEVKDEE ITKLLHERKS LLLQKQEEED QDWTKIEKTR SCVESLQSDM IALQQSISRT CSSILKLIDD ELYPQLVALT
401: SGLMHMWRTM YECHQVQKHI SQQVNHLTNH QIRDSTTDFH RQATAQLETE VTSWYNSFCK LMKSQQEYVR ALCRWIQLTE RLASDSQQSH CAPVVRTLCE
501: EWQLALDRFP DKVASEAIKN LLSAIHSIVL QQAEECNLLK KSEKLERRLQ KELNSLFELE NKLEGSIVGD THLSLSPKHP LSVKRTKTEA LRKRVEDAKA
601: KYLNSVQVSQ AMTVNNLQTS LPNVFQALMG FSSVCAQAFE AVHSYAKQAV LS
001: MGCAASRIDN EEKVLVCRQR KRLMKKLLGF RGEFADAQLA YLRALRNTGV TLRQFTESET LELENTSYGL SLPLPPSPPP TLPPSPPPPP PFSPDLRNPE
101: TSHDLADEEE EGENDGGNDG SGAAPPPPLP NSWNIWNPFE SLELHSHPNG DNVVTQVELK KKQQIQQAEE EDWAETKSQF EEEDEQQEAG GTCLDLSVHQ
201: IEAVSGCNMK KPRRLKFKLG EVMDGNSSMT SCSGKDLEKT HVTDCRIRRT LEGIIRELDD YFLKASGCEK EIAVIVDINS RDTVDPFRYQ ETRRKRSSSA
301: KVFSALSWSW SSKSLQLGKD ATTSGTVEPC RPGAHCSTLE KLYTAEKKLY QLVRNKEIAK VEHERKSALL QKQDGETYDL SKMEKARLSL ESLETEIQRL
401: EDSITTTRSC LLNLINDELY PQLVALTSGL AQMWKTMLKC HQVQIHISQQ LNHLPDYPSI DLSSEYKRQA VNELETEVTC WYNSFCKLVN SQREYVKTLC
501: TWIQLTDRLS NEDNQRSSLP VAARKLCKEW QLVFEKLPDK VTSEAIKSFL MSIKSIIHQQ AEEYNLRRKC NKLERRLEKE LISLAEIERR LEGILAMEEE
601: EVSSTSLGSK HPLSIKQAKI EALRKRVDIE KTKYLNSVEV SKRMTLDNLK SSLPNVFQML TALANVFANG FESVNGQTGT DVSDTSQHSD ESQP
101: TSHDLADEEE EGENDGGNDG SGAAPPPPLP NSWNIWNPFE SLELHSHPNG DNVVTQVELK KKQQIQQAEE EDWAETKSQF EEEDEQQEAG GTCLDLSVHQ
201: IEAVSGCNMK KPRRLKFKLG EVMDGNSSMT SCSGKDLEKT HVTDCRIRRT LEGIIRELDD YFLKASGCEK EIAVIVDINS RDTVDPFRYQ ETRRKRSSSA
301: KVFSALSWSW SSKSLQLGKD ATTSGTVEPC RPGAHCSTLE KLYTAEKKLY QLVRNKEIAK VEHERKSALL QKQDGETYDL SKMEKARLSL ESLETEIQRL
401: EDSITTTRSC LLNLINDELY PQLVALTSGL AQMWKTMLKC HQVQIHISQQ LNHLPDYPSI DLSSEYKRQA VNELETEVTC WYNSFCKLVN SQREYVKTLC
501: TWIQLTDRLS NEDNQRSSLP VAARKLCKEW QLVFEKLPDK VTSEAIKSFL MSIKSIIHQQ AEEYNLRRKC NKLERRLEKE LISLAEIERR LEGILAMEEE
601: EVSSTSLGSK HPLSIKQAKI EALRKRVDIE KTKYLNSVEV SKRMTLDNLK SSLPNVFQML TALANVFANG FESVNGQTGT DVSDTSQHSD ESQP
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G34670]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.