Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84637 | Canola | cytosol | 84.73 | 87.63 |
| Bra022983.1-P | Field mustard | cytosol | 86.74 | 87.37 |
| CDX79570 | Canola | cytosol | 86.6 | 87.23 |
| VIT_10s0003g04480.t01 | Wine grape | nucleus | 52.88 | 56.29 |
| KRH12768 | Soybean | cytosol | 40.2 | 44.43 |
| GSMUA_Achr5P00570_001 | Banana | cytosol | 41.35 | 42.96 |
| KRH37731 | Soybean | nucleus | 39.77 | 42.86 |
| GSMUA_Achr9P30410_001 | Banana | cytosol | 36.74 | 41.46 |
| Os01t0585600-01 | Rice | nucleus | 35.3 | 35.77 |
| HORVU3Hr1G050880.1 | Barley | nucleus | 35.73 | 35.63 |
| TraesCS3D01G213000.1 | Wheat | nucleus | 35.73 | 35.48 |
| TraesCS3B01G240800.1 | Wheat | nucleus | 35.73 | 35.48 |
| TraesCS3A01G210200.1 | Wheat | nucleus | 35.3 | 35.15 |
| Zm00001d011231_P001 | Maize | nucleus | 34.01 | 34.76 |
| Zm00001d044312_P001 | Maize | nucleus | 34.44 | 34.09 |
| EES00973 | Sorghum | nucleus | 34.44 | 34.05 |
| AT1G02110.1 | Thale cress | nucleus | 27.67 | 27.31 |
| AT3G51290.2 | Thale cress | cytosol | 29.83 | 25.94 |
| AT3G60320.1 | Thale cress | nucleus | 27.09 | 23.62 |
| AT5G25590.1 | Thale cress | nucleus | 22.91 | 20.52 |
| AT1G20530.1 | Thale cress | cytosol | 18.01 | 20.36 |
| AT1G52320.5 | Thale cress | nucleus | 22.48 | 19.55 |
| AT4G39790.1 | Thale cress | plastid | 18.44 | 19.48 |
| AT4G30130.3 | Thale cress | nucleus | 19.45 | 18.62 |
| AT2G19090.1 | Thale cress | nucleus | 19.6 | 16.71 |
| AT1G77500.1 | Thale cress | nucleus | 21.04 | 16.61 |
| AT2G27090.2 | Thale cress | nucleus | 17.58 | 16.42 |
| AT2G17110.1 | Thale cress | nucleus | 17.29 | 16.37 |
| AT1G21740.1 | Thale cress | cytosol | 22.05 | 16.05 |
| AT4G35240.1 | Thale cress | nucleus | 19.88 | 15.95 |
| AT5G54480.1 | Thale cress | nucleus | 14.12 | 13.61 |
Protein Annotations
| MapMan:35.1 | EntrezGene:818032 | ProteinID:AEC09007.1 | ProteinID:AEC09008.1 | EMBL:AK118990 | ArrayExpress:AT2G34670 |
| EnsemblPlantsGene:AT2G34670 | RefSeq:AT2G34670 | TAIR:AT2G34670 | RefSeq:AT2G34670-TAIR-G | EnsemblPlants:AT2G34670.2 | TAIR:AT2G34670.2 |
| Unigene:At.37774 | ncoils:Coil | InterPro:DUF630 | InterPro:DUF632 | UniProt:F4IIU2 | RefSeq:NP_001189676.1 |
| RefSeq:NP_181014.2 | PFAM:PF04782 | PFAM:PF04783 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020100 |
| PO:PO:0025022 | PANTHER:PTHR21450 | PANTHER:PTHR21450:SF21 | UniParc:UPI0001E92CD6 | SEG:seg | : |
Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G34670]
Coordinates
chr2:-:14612578..14615795
Molecular Weight (calculated)
78630.1 Da
IEP (calculated)
5.539
GRAVY (calculated)
-0.661
Length
694 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCAASRIDN EEKVLVCRQR KRLMKKLLGF RGEFADAQLA YLRALRNTGV TLRQFTESET LELENTSYGL SLPLPPSPPP TLPPSPPPPP PFSPDLRNPE
101: TSHDLADEEE EGENDGGNDG SGAAPPPPLP NSWNIWNPFE SLELHSHPNG DNVVTQVELK KKQQIQQAEE EDWAETKSQF EEEDEQQEAG GTCLDLSVHQ
201: IEAVSGCNMK KPRRLKFKLG EVMDGNSSMT SCSGKDLEKT HVTDCRIRRT LEGIIRELDD YFLKASGCEK EIAVIVDINS RDTVDPFRYQ ETRRKRSSSA
301: KVFSALSWSW SSKSLQLGKD ATTSGTVEPC RPGAHCSTLE KLYTAEKKLY QLVRNKEIAK VEHERKSALL QKQDGETYDL SKMEKARLSL ESLETEIQRL
401: EDSITTTRSC LLNLINDELY PQLVALTSGL AQMWKTMLKC HQVQIHISQQ LNHLPDYPSI DLSSEYKRQA VNELETEVTC WYNSFCKLVN SQREYVKTLC
501: TWIQLTDRLS NEDNQRSSLP VAARKLCKEW QLVFEKLPDK VTSEAIKSFL MSIKSIIHQQ AEEYNLRRKC NKLERRLEKE LISLAEIERR LEGILAMEEE
601: EVSSTSLGSK HPLSIKQAKI EALRKRVDIE KTKYLNSVEV SKRMTLDNLK SSLPNVFQML TALANVFANG FESVNGQTGT DVSDTSQHSD ESQP
101: TSHDLADEEE EGENDGGNDG SGAAPPPPLP NSWNIWNPFE SLELHSHPNG DNVVTQVELK KKQQIQQAEE EDWAETKSQF EEEDEQQEAG GTCLDLSVHQ
201: IEAVSGCNMK KPRRLKFKLG EVMDGNSSMT SCSGKDLEKT HVTDCRIRRT LEGIIRELDD YFLKASGCEK EIAVIVDINS RDTVDPFRYQ ETRRKRSSSA
301: KVFSALSWSW SSKSLQLGKD ATTSGTVEPC RPGAHCSTLE KLYTAEKKLY QLVRNKEIAK VEHERKSALL QKQDGETYDL SKMEKARLSL ESLETEIQRL
401: EDSITTTRSC LLNLINDELY PQLVALTSGL AQMWKTMLKC HQVQIHISQQ LNHLPDYPSI DLSSEYKRQA VNELETEVTC WYNSFCKLVN SQREYVKTLC
501: TWIQLTDRLS NEDNQRSSLP VAARKLCKEW QLVFEKLPDK VTSEAIKSFL MSIKSIIHQQ AEEYNLRRKC NKLERRLEKE LISLAEIERR LEGILAMEEE
601: EVSSTSLGSK HPLSIKQAKI EALRKRVDIE KTKYLNSVEV SKRMTLDNLK SSLPNVFQML TALANVFANG FESVNGQTGT DVSDTSQHSD ESQP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.