Factsheet for Zm00001d017461_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051338_P002	Maize	nucleus	81.79	81.93
Os02t0654600-00	Rice	nucleus	75.05	69.01
TraesCS6D01G225400.1	Wheat	cytosol, mitochondrion	67.58	66.01
HORVU6Hr1G062350.2	Barley	plastid	68.12	65.5
TraesCS6B01G281100.1	Wheat	mitochondrion, plastid	67.58	65.09
TraesCS6A01G243100.1	Wheat	mitochondrion	67.03	65.02
CDX83412	Canola	nucleus	37.52	30.61
Zm00001d000039_P001	Maize	nucleus	42.62	29.96
CDY42691	Canola	nucleus	39.34	29.88
CDY56992	Canola	nucleus	39.34	29.71
KRH01066	Soybean	nucleus	39.34	29.63
Zm00001d029946_P003	Maize	nucleus	41.89	29.52
CDX95620	Canola	nucleus	37.16	29.35
Bra014497.1-P	Field mustard	nucleus	39.16	28.22
AT1G02110.1	Thale cress	nucleus	36.07	28.16
KRH40173	Soybean	nucleus	39.34	28.12
CDX71821	Canola	nucleus	35.7	27.61
CDY41178	Canola	nucleus	36.07	27.46
Bra007523.1-P	Field mustard	nucleus	36.07	27.39
AT3G60320.1	Thale cress	nucleus	38.62	26.63
KRH66512	Soybean	nucleus	38.62	26.53
Bra000365.1-P	Field mustard	nucleus	38.43	26.31
VIT_15s0021g01550.t01	Wine grape	nucleus	40.07	26.04
PGSC0003DMT400066867	Potato	nucleus	39.34	25.35
Zm00001d022626_P001	Maize	nucleus	28.6	24.15
Solyc01g090270.2.1	Tomato	nucleus	38.43	24.09
Zm00001d040901_P001	Maize	mitochondrion	10.2	22.05
Zm00001d011231_P001	Maize	nucleus	24.04	19.44
Zm00001d044312_P001	Maize	nucleus	22.59	17.69
Zm00001d010488_P008	Maize	cytosol	24.41	17.03
Zm00001d022598_P001	Maize	cytosol	22.22	16.87
Zm00001d053766_P001	Maize	cytosol	19.13	16.8
Zm00001d019173_P001	Maize	nucleus	22.04	16.31
Zm00001d046839_P001	Maize	nucleus	11.84	16.01
Zm00001d046842_P001	Maize	nucleus	11.84	16.01
Zm00001d012496_P001	Maize	nucleus	10.93	16.0
Zm00001d048891_P002	Maize	nucleus	20.4	15.01
Zm00001d031530_P006	Maize	nucleus	21.31	14.85
Zm00001d049762_P007	Maize	nucleus	21.13	14.55
Zm00001d017553_P001	Maize	cytosol	19.85	14.48
Zm00001d011823_P002	Maize	plastid	22.95	14.03
Zm00001d038223_P001	Maize	cytosol	22.4	13.56
Zm00001d013369_P001	Maize	nucleus	14.57	13.18
Zm00001d028960_P001	Maize	nucleus	20.04	12.46
Zm00001d026130_P001	Maize	nucleus	17.67	12.29
Zm00001d002669_P002	Maize	cytosol	17.49	12.17
Zm00001d006286_P001	Maize	nucleus	20.22	12.14
Zm00001d021452_P001	Maize	nucleus	20.58	12.01

Protein Annotations

EnsemblPlants:Zm00001d017461_P001	EnsemblPlants:Zm00001d017461_T001	EnsemblPlantsGene:Zm00001d017461	EntrezGene:103627496	InterPro:DUF630	InterPro:DUF632
ncoils:Coil	PANTHER:PTHR21450	PANTHER:PTHR21450:SF11	PFAM:PF04782	PFAM:PF04783	ProteinID:AQK73211.1
SEG:seg	UniParc:UPI000221A6E0	UniProt:A0A1D6HEZ3	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5:-:196486219..196488814

Molecular Weight (calculated)

60850.6 Da

IEP (calculated)

10.321

GRAVY (calculated)

-0.413

Length

549 amino acids

Sequence
(BLAST)

001: MGAASSREGD AARAAAREHT KRCRERRRLA REAVRLRRHL AASHAAYLRS LGVVASALTR FAVGEPLPVS DHTPPAVIAH RPVVVPSSPP PLLRAIDQQP
101: QPEARRGGAV PADVGAVFEE TRMVVRHRSL AEVAAGLEEY FVKASVAGDT VSALFEASTT EFNGASASHS FLGALCCLSA PTLDRIDSMS SRQRHSATLQ
201: QLLAWEKKLY KEVKAREKSQ IRHDKKLAEL RDQEYSRKID VDIQKLKAAW DRARGQLETA SQSVDATSSA ISQLRDAHLA RQLLELCHAV LDMWRAMRQH
301: HEAQGLLAQQ LRGLSSRTSM DPTSEIHHRA TRALEAAMNA WSAAMAHMAK HQRDYVHAVH GWLKLTLTPV NGAAEASPVA AELAAFVDRW GKVLDRVHCV
401: DVLKSIKSFA GAVRAIHALQ SDELRVARRV RQYSRELDRK SRMLRQVEKS YYDSYLPGGM SMWHWGRQAH DAGNEVAQRR DEIAACRKMV EDEMRRHAKA
501: IDATRTATVT AVQGKLPAVF QSMAAFSASL ANSLEAAYRA PQQNTNMQE

Best Arabidopsis Sequence Match ( AT1G02110.1 )
(BLAST)

001: MGCTASKLDS EDAVRRCKER RRLMKDAVYA RHHLAAAHSD YCRSLRLTGS ALSSFAAGEP LSVSENTPAV FLRPSSSQDA PRVPSSHSPE PPPPPIRSKP
101: KPTRPRRLPH ILSDSSPSSS PATSFYPTAH QNSTYSRSPS QASSVWNWEN FYPPSPPDSE YFERKARQNH KHRPPSDYDA ETERSDHDYC HSRRDAAEEV
201: HCSEWGDDHD RFTATSSSDG DGEVETHVSR SGIEEEPVKQ PHQDPNGKEH SDHVTTSSDC YKTKLVVRHK NLKEILDAVQ DYFDKAASAG DQVSAMLEIG
301: RAELDRSFSK LRKTVYHSSS VFSNLSASWT SKPPLAVKYK LDASTLNDEQ GGLKSLCSTL DRLLAWEKKL YEDVKAREGV KIEHEKKLSA LQSQEYKGGD
401: ESKLDKTKTS ITRLQSLIIV SSEAVLTTSN AILRLRDTDL VPQLVELCHG LMYMWKSMHE YHEIQNNIVQ QVRGLINQTE RGESTSEVHR QVTRDLESAV
501: SLWHSSFCRI IKFQREFICS LHAWFKLSLV PLSNGDPKKQ RPDSFALCEE WKQSLERVPD TVASEAIKSF VNVVHVISIK QAEEVKMKKR TESAGKELEK
601: KASSLRSIER KYYQAYSTVG IGPGPEVLDS RDPLSEKKCE LAACQRQVED EVMRHVKAVE VTRAMTLNNL QTGLPNVFQA LTSFSSLFTE SLQTVCSRSY
701: SIN

Arabidopsis Description

BZIP domain class transcription factor (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q56W45]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.