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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU88702 Sorghum cytosol 47.35 79.14
TraesCS2B01G181100.1 Wheat nucleus 68.11 69.43
TraesCS2D01G161700.1 Wheat nucleus 68.39 69.33
TraesCS2A01G155900.1 Wheat nucleus 68.25 69.0
Zm00001d019173_P001 Maize nucleus 66.49 66.04
VIT_09s0002g04590.t01 Wine grape nucleus 41.11 49.51
Solyc03g120140.2.1 Tomato cytosol 19.0 48.78
KRH23466 Soybean nucleus 40.84 40.19
KRH09858 Soybean nucleus 40.16 39.78
Os05t0394200-01 Rice nucleus 35.01 38.91
AT1G52320.5 Thale cress nucleus 41.52 38.35
CDY61085 Canola nucleus 38.53 38.07
CDY52975 Canola nucleus 38.53 38.02
Os01t0500500-01 Rice nucleus, plasma membrane 40.84 37.77
Bra018963.1-P Field mustard nucleus 38.4 37.73
Os09t0538700-01 Rice nucleus 22.8 25.73
Os01t0585600-01 Rice nucleus 21.85 23.5
Os10t0562700-01 Rice nucleus 23.47 22.56
Os02t0654600-00 Rice nucleus 17.37 21.44
Os09t0542500-00 Rice cytosol 13.7 18.43
Os01t0960200-00 Rice nucleus 6.65 18.28
Os05t0172300-01 Rice nucleus 17.91 18.28
Os08t0551200-00 Rice cytosol 19.4 17.65
Os02t0669900-01 Rice cytosol 10.18 17.56
Os02t0175301-00 Rice nucleus 8.68 17.07
Os09t0368900-00 Rice nucleus 15.88 17.06
Os05t0255800-01 Rice nucleus 10.85 16.95
Os09t0547300-01 Rice nucleus 19.81 15.89
Os02t0175200-00 Rice cytosol, mitochondrion 6.78 15.87
Os04t0562800-00 Rice cytosol, mitochondrion 11.67 15.69
Os07t0686500-01 Rice endoplasmic reticulum 15.2 15.69
Os03t0321500-01 Rice plasma membrane 17.5 15.3
Os05t0425000-00 Rice nucleus 18.05 15.03
Protein Annotations
MapMan:35.1EntrezGene:4342713ProteinID:BAC16409.1ProteinID:BAD31698.1ProteinID:BAT00606.1ncoils:Coil
InterPro:DUF630InterPro:DUF632GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0016020
EnsemblPlantsGene:Os07g0211900EnsemblPlants:Os07t0211900-01PFAM:PF04782PFAM:PF04783PANTHER:PTHR21450PANTHER:PTHR21450:SF18
UniProt:Q8H4U8UniParc:UPI00000AD65DRefSeq:XP_015644794.1SEG:seg::
Description
Protein of unknown function DUF632 domain containing protein. (Os07t0211900-01)
Coordinates
chr7:-:6117890..6121772
Molecular Weight (calculated)
81796.2 Da
IEP (calculated)
7.032
GRAVY (calculated)
-0.655
Length
737 amino acids
Sequence
(BLAST)
001: MGCAQSNEDG EGPVARCRER KHLLRDAVAA RHALAGAHAG HAAALKNVGA ALSDYASGEG EAHAGGALRS GSADSSAAAA ALVTASSDGK PVLAILPPPP
101: PELPPPPPPP PLPPHGDVEA APLARSMSAP DLHLQQPIKK KPSGEAPIME EEDDEGGDGG DAGGRRGDDD AELKPPPPLP SQRPPPSRSP PPLPPENDHK
201: VDTPGGFISS LFDSMPPPTL DTAAAEPSSS ASAERREPPP PAPDEHQPSA AAREVAEGKR PAAAEAATTR RAMTQKAARK GKAKAVMLVA PPQPQPAKLG
301: VGDILRALDE HFLKASQSAH EVSKLLEAAR MHYHSNFAET RGFVDHSARV MQVITWNRSF KGIPQPENVR NEMDDDEWET HATTLDKLLA WEKKLYHEVK
401: DFEVIRREYQ QKLAVLNKKK QRGVTSSSLE KTKSVVSHLH TKYVVDLQTM ESTVAEINRL RDQQLYPKLL ELVKGMWHMW DAMYLHHKTQ LKIILELKSL
501: DISVAPRETS EQHHDRTVQL WNVVHEWHTQ FDKFMTYQKQ YVGSLYTWIK LNVIPIDTNL KPNSSQPHET TPPIKRVLHA WHEILGKLPD EAAKKAINTF
601: AEIVKTILVH QEDELKLRMK IEDTRRDYGK KRRQFDDWAQ KYIHQTAGIL PEDRNPDGAR PDPMAERKAA MEKLELSMKE LEEMYVKQCR VVREKSLSLL
701: RTNLPELFRV VSDFSLQSAG MFKGVWSIAH TNDQLDE
Best Arabidopsis Sequence Match ( AT1G52320.5 )
(BLAST)
001: MGCAQSKIEN EEAVTRCKER KQLMKDAVTA RNAFAAAHSA YAMALKNTGA ALSDYSHGEF LVSNHSSSSA AAAIASTSSL PTAISPPLPS STAPVSNSTA
101: SSSSAAVPQP IPDTLPPPPP PPPLPLQRAA TMPEMNGRSG GGHAGSGLNG IEEDGALDND DDDDDDDDDS EMENRDRLIR KSRSRGGSTR GNRTTIEDHH
201: LQEEKAPPPP PLANSRPIPP PRQHQHQHQQ QQQQPFYDYF FPNVENMPGT TLEDTPPQPQ PQPTRPVPPQ PHSPVVTEDD EDEEEEEEEE EEEEETVIER
301: KPLVEERPKR VEEVTIELEK VTNLRGMKKS KGIGIPGERR GMRMPVTATH LANVFIELDD NFLKASESAH DVSKMLEATR LHYHSNFADN RGHIDHSARV
401: MRVITWNRSF RGIPNADDGK DDVDLEENET HATVLDKLLA WEKKLYDEVK AGELMKIEYQ KKVAHLNRVK KRGGHSDSLE RAKAAVSHLH TRYIVDMQSM
501: DSTVSEINRL RDEQLYLKLV HLVEAMGKMW EMMQIHHQRQ AEISKVLRSL DVSQAVKETN DHHHERTIQL LAVVQEWHTQ FCRMIDHQKE YIKALGGWLK
601: LNLIPIESTL KEKVSSPPRV PNPAIQKLLH AWYDRLDKIP DEMAKSAIIN FAAVVSTIMQ QQEDEISLRN KCEETRKELG RKIRQFEDWY HKYIQKRGPE
701: GMNPDEADND HNDEVAVRQF NVEQIKKRLE EEEEAYHRQS HQVREKSLAS LRTRLPELFQ AMSEVAYSCS DMYRAITYAS KRQSQSERHQ KPSQGQSS
Arabidopsis Description
BZIP protein, putative; 48652-45869 [Source:UniProtKB/TrEMBL;Acc:Q9C824]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.