Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G257700.1 | Wheat | plastid | 90.73 | 80.99 |
| TraesCS4D01G257600.1 | Wheat | plastid | 89.35 | 78.19 |
| TraesCS4A01G047100.1 | Wheat | cytosol | 76.57 | 72.19 |
| Os03t0205000-01 | Rice | plastid | 65.71 | 66.56 |
| EER92676 | Sorghum | plastid | 61.13 | 58.16 |
| Zm00001d028088_P003 | Maize | plastid | 60.17 | 57.83 |
| GSMUA_Achr3P30080_001 | Banana | plastid | 41.75 | 46.78 |
| PGSC0003DMT400055441 | Potato | cytosol | 34.72 | 44.78 |
| VIT_18s0001g09180.t01 | Wine grape | cytosol | 36.63 | 42.79 |
| KRH61398 | Soybean | plastid | 37.49 | 41.76 |
| Solyc04g077930.2.1 | Tomato | nucleus, plastid | 39.72 | 40.99 |
| KRH52085 | Soybean | plastid | 36.85 | 40.75 |
| AT1G27752.1 | Thale cress | nucleus, plastid | 37.49 | 40.32 |
| CDY11766 | Canola | nucleus, plastid | 37.81 | 36.98 |
| CDX90107 | Canola | nucleus, plastid | 37.91 | 35.85 |
| CDX84904 | Canola | plastid | 4.05 | 35.51 |
| Bra010919.1-P | Field mustard | nucleus, plastid | 37.91 | 35.28 |
| CDY11511 | Canola | plasma membrane | 9.05 | 31.14 |
| VIT_18s0001g09190.t01 | Wine grape | nucleus, plastid | 2.88 | 18.75 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G069920.9 | EnsemblPlantsGene:HORVU4Hr1G069920 | Gene3D:1.10.8.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:CUE | InterPro:IPR003892 | InterPro:UBA-like_sf | ncoils:Coil | PANTHER:PTHR21494 | PANTHER:PTHR21494:SF0 |
| PFAM:PF02845 | PFscan:PS51140 | SEG:seg | SMART:SM00546 | SUPFAM:SSF46934 | UniParc:UPI000B4607BB |
| UniProt:A0A287PJ09 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:573190270..573200352
Molecular Weight (calculated)
103286.0 Da
IEP (calculated)
6.254
GRAVY (calculated)
-0.760
Length
939 amino acids
Sequence
(BLAST)
(BLAST)
001: ESQAVVDLLN DALASLLRAK PREFWRQVAQ NGSLHAFLDS YLQFRHRWYD LPHRGPRGTV AGLIVGELEL CRRVFMVLYR ISSNKDPGSG PGESLSTKEH
101: TALLQEKRLL DLPKLLDICA IYGHDNGELT SSLVTNAIVV QPNLLNGIST VLPQFLDIFH TMQDRCMDSL QVLSSPGPNV SGHTQLQKDF SEVLDFVNDA
201: IITLDAFADA YQPAALLLCA SFERGDRVEE LLNTLASLYD LLLPSLLQGF QVMSSSQSNG ETSSESILND IVLGIRMLSK RVVGFGWRLL EFCYLNDQLK
301: EEDVQASTKM FPAKVEDPMI RGEIIVQILK DINREATYSS NGNPGKTFMQ ALQKEFQLMS RIGDIRNKGW IYMEDEQFQF ISRLCGSTVT SWNSVPDLPI
401: SSHGGELQQK NEEAAVIESK ISQIRDLLPH YGKGFLAACL EAYNQNHEEV TERLLDGTLH KDLLALDTSL QEMPQQKSAP SVAKDKGKGV LVETVHNIAN
501: KPHKVEAQSS SVSSASRAPI SYLSSVSSAS KAPASSVSSV PQGRFIRKTD DDLPNFAVLD SQKAKDAVKS AVLDSQYEYE DEYDDSFDDL GFSVAESSYE
601: EAEDANDAEG SSSGPRWASQ KPQFYLKGGK NYSYKVAGSV AVSNAREAAV LNNTQKDTIH GLGRGGNLPI GGNLPMGVPN RQHRVVEEEE GGHANSFSNP
701: RGRGRGRKGG WDQGNPSEED ENSSGSQSFD RDGRRGGRNH GNLPEVNNGQ QGFGGGARRG TRDEDNRPEM NNHSNVQQGF GRGARRGARE EDNRPEVNNR
801: PNAQQGFGRG ARRGDRDEDN RPEGNNHGQQ GFGRGGRRGE PEVNNHGQQG FGRGARRGDR DEDNRPELNN HGQQGFGRGA RRGDRNHDDP VEDNEDRNAA
901: QGFARGGPGP RGGGGRRGGR NHNRRDQALR KHMQGMTGL
101: TALLQEKRLL DLPKLLDICA IYGHDNGELT SSLVTNAIVV QPNLLNGIST VLPQFLDIFH TMQDRCMDSL QVLSSPGPNV SGHTQLQKDF SEVLDFVNDA
201: IITLDAFADA YQPAALLLCA SFERGDRVEE LLNTLASLYD LLLPSLLQGF QVMSSSQSNG ETSSESILND IVLGIRMLSK RVVGFGWRLL EFCYLNDQLK
301: EEDVQASTKM FPAKVEDPMI RGEIIVQILK DINREATYSS NGNPGKTFMQ ALQKEFQLMS RIGDIRNKGW IYMEDEQFQF ISRLCGSTVT SWNSVPDLPI
401: SSHGGELQQK NEEAAVIESK ISQIRDLLPH YGKGFLAACL EAYNQNHEEV TERLLDGTLH KDLLALDTSL QEMPQQKSAP SVAKDKGKGV LVETVHNIAN
501: KPHKVEAQSS SVSSASRAPI SYLSSVSSAS KAPASSVSSV PQGRFIRKTD DDLPNFAVLD SQKAKDAVKS AVLDSQYEYE DEYDDSFDDL GFSVAESSYE
601: EAEDANDAEG SSSGPRWASQ KPQFYLKGGK NYSYKVAGSV AVSNAREAAV LNNTQKDTIH GLGRGGNLPI GGNLPMGVPN RQHRVVEEEE GGHANSFSNP
701: RGRGRGRKGG WDQGNPSEED ENSSGSQSFD RDGRRGGRNH GNLPEVNNGQ QGFGGGARRG TRDEDNRPEM NNHSNVQQGF GRGARRGARE EDNRPEVNNR
801: PNAQQGFGRG ARRGDRDEDN RPEGNNHGQQ GFGRGGRRGE PEVNNHGQQG FGRGARRGDR DEDNRPELNN HGQQGFGRGA RRGDRNHDDP VEDNEDRNAA
901: QGFARGGPGP RGGGGRRGGR NHNRRDQALR KHMQGMTGL
001: MSNRRSNRQD ENTRYVPKGH QQQKFVPKPM NPTPTSNSTP FPVSLSSSLR QSDSSGASSR VSASGGSRVR IGDQGQLVSS KSPAQGGGSF VNYLPQDEAV
101: AAGLGPDDGG LDPVESQGVV DLLNRELTRL LKLNPRDFWR EVASDASLHD FLDSFLQFRS RWYDFPFHGV KGIVAGVIVG ELELCRRVFM VLYRISSNRD
201: PGAKAADSLS QKDHEVLLQD KKLLDLPKLL DICAIYGHEN AELTKSLIEN AVKSQNGISE SLNMMLSHFL GILHTMHHRC TSSLETLVSS ANSEDHGRRQ
301: LHSDLLEVMD FINDGVVSLD AFISAYTPAV FILACPVETS YGSDELLRSL VRLHDSLLPS LHRGFQVLFK DEDHDSLSDI STSLNMLSTR IGSLCWKILD
401: ICYLSNDKFN HETSIPAVTK MFPSRVEDPM VRADILIQTF REISGLSEQS LESKNRLLQK IEKNYRIIDR LRSLQNAGWI SMEDEQLQYL SMIMLHSADT
501: FSMKESPLLL TDGRNAEELM DENAVVMQSK ISQIKDIFPE YGNGFLAACL EAYNQNPEEV IQRILEGTLH EDLQRLDTSL ETMPQPKSAP TLRSKDKGKG
601: KLIESDTSSS ASAIYTEKPI TRPSLPASSA SSATVGRFVR KPKDDTPSYK ILDARKESDR ERNAALLAQY EYDDEYDDSF DDLGLSIAES GTEESGAFGN
701: RAGSEPSDAP KWGSRKNPQF YVKDGKNYSY KVAGAVAVAN ANEASLVNEA EGDKILGLGR GGNIPLGAVR KLTEYQAQRD EKGQSNVNVN PSDGRENGRN
801: WRGVRGRGRG VVNREQPQEK SNESSNNNSE VNTEAENGGG RGRGRGRRGG GGGRNHNHKD RAMKKHIASV SGF
101: AAGLGPDDGG LDPVESQGVV DLLNRELTRL LKLNPRDFWR EVASDASLHD FLDSFLQFRS RWYDFPFHGV KGIVAGVIVG ELELCRRVFM VLYRISSNRD
201: PGAKAADSLS QKDHEVLLQD KKLLDLPKLL DICAIYGHEN AELTKSLIEN AVKSQNGISE SLNMMLSHFL GILHTMHHRC TSSLETLVSS ANSEDHGRRQ
301: LHSDLLEVMD FINDGVVSLD AFISAYTPAV FILACPVETS YGSDELLRSL VRLHDSLLPS LHRGFQVLFK DEDHDSLSDI STSLNMLSTR IGSLCWKILD
401: ICYLSNDKFN HETSIPAVTK MFPSRVEDPM VRADILIQTF REISGLSEQS LESKNRLLQK IEKNYRIIDR LRSLQNAGWI SMEDEQLQYL SMIMLHSADT
501: FSMKESPLLL TDGRNAEELM DENAVVMQSK ISQIKDIFPE YGNGFLAACL EAYNQNPEEV IQRILEGTLH EDLQRLDTSL ETMPQPKSAP TLRSKDKGKG
601: KLIESDTSSS ASAIYTEKPI TRPSLPASSA SSATVGRFVR KPKDDTPSYK ILDARKESDR ERNAALLAQY EYDDEYDDSF DDLGLSIAES GTEESGAFGN
701: RAGSEPSDAP KWGSRKNPQF YVKDGKNYSY KVAGAVAVAN ANEASLVNEA EGDKILGLGR GGNIPLGAVR KLTEYQAQRD EKGQSNVNVN PSDGRENGRN
801: WRGVRGRGRG VVNREQPQEK SNESSNNNSE VNTEAENGGG RGRGRGRRGG GGGRNHNHKD RAMKKHIASV SGF
Arabidopsis Description
Ubiquitin system component Cue protein [Source:UniProtKB/TrEMBL;Acc:B3H6L4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.