Factsheet for AT1G27752.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11766	Canola	nucleus, plastid	82.7	75.21
CDX90107	Canola	nucleus, plastid	82.82	72.81
Bra010919.1-P	Field mustard	nucleus, plastid	83.96	72.65
KRH61398	Soybean	plastid	52.69	54.57
KRH52085	Soybean	plastid	52.0	53.47
Solyc04g077930.2.1	Tomato	nucleus, plastid	54.18	51.98
PGSC0003DMT400055441	Potato	cytosol	41.81	50.14
VIT_18s0001g09190.t01	Wine grape	nucleus, plastid	8.25	50.0
GSMUA_Achr3P30080_001	Banana	plastid	47.31	49.28
Os03t0205000-01	Rice	plastid	47.19	44.44
Zm00001d028088_P003	Maize	plastid	45.36	40.53
EER92676	Sorghum	plastid	45.7	40.43
TraesCS4B01G257700.1	Wheat	plastid	45.7	37.93
HORVU4Hr1G069920.9	Barley	cytosol	40.32	37.49
TraesCS4D01G257600.1	Wheat	plastid	46.05	37.47
TraesCS4A01G047100.1	Wheat	cytosol	40.55	35.54

Protein Annotations

Gene3D:1.10.8.10	MapMan:35.2	EntrezGene:5007732	ProteinID:AEE30873.1	ArrayExpress:AT1G27752	EnsemblPlantsGene:AT1G27752
RefSeq:AT1G27752	TAIR:AT1G27752	RefSeq:AT1G27752-TAIR-G	EnsemblPlants:AT1G27752.1	TAIR:AT1G27752.1	Unigene:At.71259
UniProt:B3H6L4	InterPro:CUE	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	InterPro:IPR003892	RefSeq:NP_001077611.1	PFAM:PF02845	PO:PO:0000293	PFscan:PS51140
PANTHER:PTHR21494	SMART:SM00546	SUPFAM:SSF46934	InterPro:UBA-like_sf	UniParc:UPI000150568A	SEG:seg

Description

Ubiquitin system component Cue protein [Source:UniProtKB/TrEMBL;Acc:B3H6L4]

Coordinates

chr1:+:9662021..9667550

Molecular Weight (calculated)

96427.1 Da

IEP (calculated)

6.285

GRAVY (calculated)

-0.584

Length

873 amino acids

Sequence
(BLAST)

001: MSNRRSNRQD ENTRYVPKGH QQQKFVPKPM NPTPTSNSTP FPVSLSSSLR QSDSSGASSR VSASGGSRVR IGDQGQLVSS KSPAQGGGSF VNYLPQDEAV
101: AAGLGPDDGG LDPVESQGVV DLLNRELTRL LKLNPRDFWR EVASDASLHD FLDSFLQFRS RWYDFPFHGV KGIVAGVIVG ELELCRRVFM VLYRISSNRD
201: PGAKAADSLS QKDHEVLLQD KKLLDLPKLL DICAIYGHEN AELTKSLIEN AVKSQNGISE SLNMMLSHFL GILHTMHHRC TSSLETLVSS ANSEDHGRRQ
301: LHSDLLEVMD FINDGVVSLD AFISAYTPAV FILACPVETS YGSDELLRSL VRLHDSLLPS LHRGFQVLFK DEDHDSLSDI STSLNMLSTR IGSLCWKILD
401: ICYLSNDKFN HETSIPAVTK MFPSRVEDPM VRADILIQTF REISGLSEQS LESKNRLLQK IEKNYRIIDR LRSLQNAGWI SMEDEQLQYL SMIMLHSADT
501: FSMKESPLLL TDGRNAEELM DENAVVMQSK ISQIKDIFPE YGNGFLAACL EAYNQNPEEV IQRILEGTLH EDLQRLDTSL ETMPQPKSAP TLRSKDKGKG
601: KLIESDTSSS ASAIYTEKPI TRPSLPASSA SSATVGRFVR KPKDDTPSYK ILDARKESDR ERNAALLAQY EYDDEYDDSF DDLGLSIAES GTEESGAFGN
701: RAGSEPSDAP KWGSRKNPQF YVKDGKNYSY KVAGAVAVAN ANEASLVNEA EGDKILGLGR GGNIPLGAVR KLTEYQAQRD EKGQSNVNVN PSDGRENGRN
801: WRGVRGRGRG VVNREQPQEK SNESSNNNSE VNTEAENGGG RGRGRGRRGG GGGRNHNHKD RAMKKHIASV SGF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.