Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G069920.9 | Barley | cytosol | 72.19 | 76.57 |
| TraesCS4B01G257700.1 | Wheat | plastid | 77.41 | 73.29 |
| TraesCS4D01G257600.1 | Wheat | plastid | 77.01 | 71.48 |
| Os03t0205000-01 | Rice | plastid | 59.34 | 63.75 |
| EER92676 | Sorghum | plastid | 56.63 | 57.14 |
| Zm00001d028088_P003 | Maize | plastid | 54.92 | 55.99 |
| GSMUA_Achr3P30080_001 | Banana | plastid | 38.76 | 46.06 |
| PGSC0003DMT400055441 | Potato | cytosol | 31.63 | 43.27 |
| VIT_18s0001g09180.t01 | Wine grape | cytosol | 34.34 | 42.54 |
| KRH61398 | Soybean | plastid | 34.34 | 40.57 |
| AT1G27752.1 | Thale cress | nucleus, plastid | 35.54 | 40.55 |
| KRH52085 | Soybean | plastid | 34.24 | 40.16 |
| Solyc04g077930.2.1 | Tomato | nucleus, plastid | 36.24 | 39.67 |
| CDY11766 | Canola | nucleus, plastid | 35.74 | 37.08 |
| CDX90107 | Canola | nucleus, plastid | 35.44 | 35.55 |
| Bra010919.1-P | Field mustard | nucleus, plastid | 35.54 | 35.08 |
| CDX84904 | Canola | plastid | 3.21 | 29.91 |
| CDY11511 | Canola | plasma membrane | 7.93 | 28.94 |
| VIT_18s0001g09190.t01 | Wine grape | nucleus, plastid | 2.31 | 15.97 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G047100.1 | EnsemblPlantsGene:TraesCS4A01G047100 | Gene3D:1.10.8.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:CUE | InterPro:IPR003892 | InterPro:UBA-like_sf | ncoils:Coil | PANTHER:PTHR21494 | PFAM:PF02845 |
| PFscan:PS51140 | SEG:seg | SMART:SM00546 | SUPFAM:SSF46934 | TIGR:cd14364 | MapMan:35.2 |
Description
No Description!
Coordinates
chr4A:-:38644594..38655551
Molecular Weight (calculated)
104248.0 Da
IEP (calculated)
5.297
GRAVY (calculated)
-0.542
Length
996 amino acids
Sequence
(BLAST)
(BLAST)
001: MPAITNRVRT EDKGERMFNG MVTTSITLPL PASSTSSIAL PSPAGLEAPI GDDGAYVQEE GQIAGGLAAS AALSPLLASP ILDEGGARTV LAQNASLHAF
101: LDSYLQFRHR WYDLPHRGPK GTVAGLVVGE LELCRRVFMV LYRISSNKDP GSGPGESLSA KEHTALLQQK KLLDLPKLLD ICAIYGHDNG ELTSSLVTNA
201: IVVQPNLLDG INTVLPQFLD IFHTMQDRCM DSLQVLSSPG PNVSGHTQLQ KDFSEVLDFV NDAIITLDAF ADAYQPAALS LCASFERGDR AEELLNTLAS
301: LYDLLLPSLL QGFQVMSSSQ SNGETSSESI LNDIVLGIRM LSKRAVGFGW RLLEFCYLND QLKEEDVQAS TKMFPAKVED PMIRGEIIVQ ILKDINREAT
401: YSSKGNPGKT FLQALQKEFQ LMSRIGDIRN KGWIYMEDEQ FQFISRLCGS TVTSWNSVPD LPISSHGGEL QQKNEEAAVI ESKISQIRDL LPHYGKGFLA
501: ACLEAYNQNP EEVIQRILDG TLHQDLLALD TSLQEMPQQQ SAPSVAKDKG KGVLVETIPN IANKPHKVEA QSSSVSSASK APISYLSSVS SASKAPASSV
601: SSVPQGRFTR KTNDDLPNYA VLDSQKAKDA VKSAVLDSQY EYEDEYDDSF DDLGFSVAES SYEEAEGAND AEGSSSGPRW ASQKKPQFYV KDGKNYSYKV
701: AGSVAVSNAR EAAVLNNTQK DTIHGLGRGG NLPIGGNLPM GVPNRQHRVV EEEEGGHANS FSRGGSNPRG RGRGRRGGWD QGNPAEENEN SSGPQSFGRD
801: GRRGGRNHGN LPEVNYGQQG FGRGARRGTR DEDNRPEMNN QQGFGRGARR GAREEDNRPE VNNHPNPQQG FGRGARRGDR DEDNRPEGNN HGQQGFGRGG
901: RRGDXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXCLTVAEAM ASPEENYEGK GDNHGVTKEP SILDDATPFA SLIHFHHVSI LLYRKE
101: LDSYLQFRHR WYDLPHRGPK GTVAGLVVGE LELCRRVFMV LYRISSNKDP GSGPGESLSA KEHTALLQQK KLLDLPKLLD ICAIYGHDNG ELTSSLVTNA
201: IVVQPNLLDG INTVLPQFLD IFHTMQDRCM DSLQVLSSPG PNVSGHTQLQ KDFSEVLDFV NDAIITLDAF ADAYQPAALS LCASFERGDR AEELLNTLAS
301: LYDLLLPSLL QGFQVMSSSQ SNGETSSESI LNDIVLGIRM LSKRAVGFGW RLLEFCYLND QLKEEDVQAS TKMFPAKVED PMIRGEIIVQ ILKDINREAT
401: YSSKGNPGKT FLQALQKEFQ LMSRIGDIRN KGWIYMEDEQ FQFISRLCGS TVTSWNSVPD LPISSHGGEL QQKNEEAAVI ESKISQIRDL LPHYGKGFLA
501: ACLEAYNQNP EEVIQRILDG TLHQDLLALD TSLQEMPQQQ SAPSVAKDKG KGVLVETIPN IANKPHKVEA QSSSVSSASK APISYLSSVS SASKAPASSV
601: SSVPQGRFTR KTNDDLPNYA VLDSQKAKDA VKSAVLDSQY EYEDEYDDSF DDLGFSVAES SYEEAEGAND AEGSSSGPRW ASQKKPQFYV KDGKNYSYKV
701: AGSVAVSNAR EAAVLNNTQK DTIHGLGRGG NLPIGGNLPM GVPNRQHRVV EEEEGGHANS FSRGGSNPRG RGRGRRGGWD QGNPAEENEN SSGPQSFGRD
801: GRRGGRNHGN LPEVNYGQQG FGRGARRGTR DEDNRPEMNN QQGFGRGARR GAREEDNRPE VNNHPNPQQG FGRGARRGDR DEDNRPEGNN HGQQGFGRGG
901: RRGDXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXCLTVAEAM ASPEENYEGK GDNHGVTKEP SILDDATPFA SLIHFHHVSI LLYRKE
001: MSNRRSNRQD ENTRYVPKGH QQQKFVPKPM NPTPTSNSTP FPVSLSSSLR QSDSSGASSR VSASGGSRVR IGDQGQLVSS KSPAQGGGSF VNYLPQDEAV
101: AAGLGPDDGG LDPVESQGVV DLLNRELTRL LKLNPRDFWR EVASDASLHD FLDSFLQFRS RWYDFPFHGV KGIVAGVIVG ELELCRRVFM VLYRISSNRD
201: PGAKAADSLS QKDHEVLLQD KKLLDLPKLL DICAIYGHEN AELTKSLIEN AVKSQNGISE SLNMMLSHFL GILHTMHHRC TSSLETLVSS ANSEDHGRRQ
301: LHSDLLEVMD FINDGVVSLD AFISAYTPAV FILACPVETS YGSDELLRSL VRLHDSLLPS LHRGFQVLFK DEDHDSLSDI STSLNMLSTR IGSLCWKILD
401: ICYLSNDKFN HETSIPAVTK MFPSRVEDPM VRADILIQTF REISGLSEQS LESKNRLLQK IEKNYRIIDR LRSLQNAGWI SMEDEQLQYL SMIMLHSADT
501: FSMKESPLLL TDGRNAEELM DENAVVMQSK ISQIKDIFPE YGNGFLAACL EAYNQNPEEV IQRILEGTLH EDLQRLDTSL ETMPQPKSAP TLRSKDKGKG
601: KLIESDTSSS ASAIYTEKPI TRPSLPASSA SSATVGRFVR KPKDDTPSYK ILDARKESDR ERNAALLAQY EYDDEYDDSF DDLGLSIAES GTEESGAFGN
701: RAGSEPSDAP KWGSRKNPQF YVKDGKNYSY KVAGAVAVAN ANEASLVNEA EGDKILGLGR GGNIPLGAVR KLTEYQAQRD EKGQSNVNVN PSDGRENGRN
801: WRGVRGRGRG VVNREQPQEK SNESSNNNSE VNTEAENGGG RGRGRGRRGG GGGRNHNHKD RAMKKHIASV SGF
101: AAGLGPDDGG LDPVESQGVV DLLNRELTRL LKLNPRDFWR EVASDASLHD FLDSFLQFRS RWYDFPFHGV KGIVAGVIVG ELELCRRVFM VLYRISSNRD
201: PGAKAADSLS QKDHEVLLQD KKLLDLPKLL DICAIYGHEN AELTKSLIEN AVKSQNGISE SLNMMLSHFL GILHTMHHRC TSSLETLVSS ANSEDHGRRQ
301: LHSDLLEVMD FINDGVVSLD AFISAYTPAV FILACPVETS YGSDELLRSL VRLHDSLLPS LHRGFQVLFK DEDHDSLSDI STSLNMLSTR IGSLCWKILD
401: ICYLSNDKFN HETSIPAVTK MFPSRVEDPM VRADILIQTF REISGLSEQS LESKNRLLQK IEKNYRIIDR LRSLQNAGWI SMEDEQLQYL SMIMLHSADT
501: FSMKESPLLL TDGRNAEELM DENAVVMQSK ISQIKDIFPE YGNGFLAACL EAYNQNPEEV IQRILEGTLH EDLQRLDTSL ETMPQPKSAP TLRSKDKGKG
601: KLIESDTSSS ASAIYTEKPI TRPSLPASSA SSATVGRFVR KPKDDTPSYK ILDARKESDR ERNAALLAQY EYDDEYDDSF DDLGLSIAES GTEESGAFGN
701: RAGSEPSDAP KWGSRKNPQF YVKDGKNYSY KVAGAVAVAN ANEASLVNEA EGDKILGLGR GGNIPLGAVR KLTEYQAQRD EKGQSNVNVN PSDGRENGRN
801: WRGVRGRGRG VVNREQPQEK SNESSNNNSE VNTEAENGGG RGRGRGRRGG GGGRNHNHKD RAMKKHIASV SGF
Arabidopsis Description
Ubiquitin system component Cue protein [Source:UniProtKB/TrEMBL;Acc:B3H6L4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.