Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11511 | Canola | plasma membrane | 32.64 | 17.22 |
| AT1G27752.1 | Thale cress | nucleus, plastid | 50.0 | 8.25 |
| GSMUA_Achr3P30080_001 | Banana | plastid | 44.44 | 7.64 |
| Bra010919.1-P | Field mustard | nucleus, plastid | 47.92 | 6.84 |
| Os03t0205000-01 | Rice | plastid | 38.19 | 5.93 |
| Zm00001d028088_P003 | Maize | plastid | 39.58 | 5.83 |
| EER92676 | Sorghum | plastid | 39.58 | 5.78 |
| TraesCS4D01G257600.1 | Wheat | plastid | 39.58 | 5.31 |
| TraesCS4B01G257700.1 | Wheat | plastid | 38.19 | 5.23 |
| HORVU4Hr1G069920.9 | Barley | cytosol | 18.75 | 2.88 |
| TraesCS4A01G047100.1 | Wheat | cytosol | 15.97 | 2.31 |
| VIT_18s0001g09180.t01 | Wine grape | cytosol | 12.5 | 2.24 |
Protein Annotations
| ArrayExpress:VIT_18s0001g09190 | EMBL:FN595227 | EnsemblPlants:VIT_18s0001g09190.t01 | EnsemblPlantsGene:VIT_18s0001g09190 | PANTHER:PTHR21494 | PANTHER:PTHR21494:SF0 |
| ProteinID:CCB45757 | ProteinID:CCB45757.1 | SEG:seg | UniParc:UPI000210A04F | UniProt:F6GZM5 | MapMan:35.2 |
Description
No Description!
Coordinates
chr18:-:7685273..7691691
Molecular Weight (calculated)
15495.0 Da
IEP (calculated)
9.937
GRAVY (calculated)
-0.776
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNRYGQNKG FTKTQKKFVP KTQREGHTPN PTLSTSLRQS AAAASSSTGK VVSAENADSV SSRGEGGSFL NYLPQDEAVA SGLGAQEGGL DPLESQRVVD
101: LSNKELSRLL KLSPREFWKQ VGSWNPRSGE GEDLEKLGRL LANS
101: LSNKELSRLL KLSPREFWKQ VGSWNPRSGE GEDLEKLGRL LANS
001: MSNRRSNRQD ENTRYVPKGH QQQKFVPKPM NPTPTSNSTP FPVSLSSSLR QSDSSGASSR VSASGGSRVR IGDQGQLVSS KSPAQGGGSF VNYLPQDEAV
101: AAGLGPDDGG LDPVESQGVV DLLNRELTRL LKLNPRDFWR EVASDASLHD FLDSFLQFRS RWYDFPFHGV KGIVAGVIVG ELELCRRVFM VLYRISSNRD
201: PGAKAADSLS QKDHEVLLQD KKLLDLPKLL DICAIYGHEN AELTKSLIEN AVKSQNGISE SLNMMLSHFL GILHTMHHRC TSSLETLVSS ANSEDHGRRQ
301: LHSDLLEVMD FINDGVVSLD AFISAYTPAV FILACPVETS YGSDELLRSL VRLHDSLLPS LHRGFQVLFK DEDHDSLSDI STSLNMLSTR IGSLCWKILD
401: ICYLSNDKFN HETSIPAVTK MFPSRVEDPM VRADILIQTF REISGLSEQS LESKNRLLQK IEKNYRIIDR LRSLQNAGWI SMEDEQLQYL SMIMLHSADT
501: FSMKESPLLL TDGRNAEELM DENAVVMQSK ISQIKDIFPE YGNGFLAACL EAYNQNPEEV IQRILEGTLH EDLQRLDTSL ETMPQPKSAP TLRSKDKGKG
601: KLIESDTSSS ASAIYTEKPI TRPSLPASSA SSATVGRFVR KPKDDTPSYK ILDARKESDR ERNAALLAQY EYDDEYDDSF DDLGLSIAES GTEESGAFGN
701: RAGSEPSDAP KWGSRKNPQF YVKDGKNYSY KVAGAVAVAN ANEASLVNEA EGDKILGLGR GGNIPLGAVR KLTEYQAQRD EKGQSNVNVN PSDGRENGRN
801: WRGVRGRGRG VVNREQPQEK SNESSNNNSE VNTEAENGGG RGRGRGRRGG GGGRNHNHKD RAMKKHIASV SGF
101: AAGLGPDDGG LDPVESQGVV DLLNRELTRL LKLNPRDFWR EVASDASLHD FLDSFLQFRS RWYDFPFHGV KGIVAGVIVG ELELCRRVFM VLYRISSNRD
201: PGAKAADSLS QKDHEVLLQD KKLLDLPKLL DICAIYGHEN AELTKSLIEN AVKSQNGISE SLNMMLSHFL GILHTMHHRC TSSLETLVSS ANSEDHGRRQ
301: LHSDLLEVMD FINDGVVSLD AFISAYTPAV FILACPVETS YGSDELLRSL VRLHDSLLPS LHRGFQVLFK DEDHDSLSDI STSLNMLSTR IGSLCWKILD
401: ICYLSNDKFN HETSIPAVTK MFPSRVEDPM VRADILIQTF REISGLSEQS LESKNRLLQK IEKNYRIIDR LRSLQNAGWI SMEDEQLQYL SMIMLHSADT
501: FSMKESPLLL TDGRNAEELM DENAVVMQSK ISQIKDIFPE YGNGFLAACL EAYNQNPEEV IQRILEGTLH EDLQRLDTSL ETMPQPKSAP TLRSKDKGKG
601: KLIESDTSSS ASAIYTEKPI TRPSLPASSA SSATVGRFVR KPKDDTPSYK ILDARKESDR ERNAALLAQY EYDDEYDDSF DDLGLSIAES GTEESGAFGN
701: RAGSEPSDAP KWGSRKNPQF YVKDGKNYSY KVAGAVAVAN ANEASLVNEA EGDKILGLGR GGNIPLGAVR KLTEYQAQRD EKGQSNVNVN PSDGRENGRN
801: WRGVRGRGRG VVNREQPQEK SNESSNNNSE VNTEAENGGG RGRGRGRRGG GGGRNHNHKD RAMKKHIASV SGF
Arabidopsis Description
Ubiquitin system component Cue protein [Source:UniProtKB/TrEMBL;Acc:B3H6L4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.