Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G257700.1 | Wheat | plastid | 94.22 | 96.1 |
| HORVU4Hr1G069920.9 | Barley | cytosol | 78.19 | 89.35 |
| TraesCS4A01G047100.1 | Wheat | cytosol | 71.48 | 77.01 |
| Os03t0205000-01 | Rice | plastid | 65.89 | 76.27 |
| EER92676 | Sorghum | plastid | 60.95 | 66.26 |
| Zm00001d028088_P003 | Maize | plastid | 60.2 | 66.12 |
| GSMUA_Achr3P30080_001 | Banana | plastid | 41.01 | 52.51 |
| AT1G27752.1 | Thale cress | nucleus, plastid | 37.47 | 46.05 |
| KRH61398 | Soybean | plastid | 35.79 | 45.55 |
| PGSC0003DMT400055441 | Potato | cytosol | 30.85 | 45.47 |
| KRH52085 | Soybean | plastid | 35.79 | 45.23 |
| Solyc04g077930.2.1 | Tomato | nucleus, plastid | 37.84 | 44.62 |
| VIT_18s0001g09180.t01 | Wine grape | cytosol | 33.36 | 44.53 |
| CDY11766 | Canola | nucleus, plastid | 36.72 | 41.04 |
| CDY11511 | Canola | plasma membrane | 10.16 | 39.93 |
| CDX90107 | Canola | nucleus, plastid | 36.72 | 39.68 |
| Bra010919.1-P | Field mustard | nucleus, plastid | 37.28 | 39.64 |
| VIT_18s0001g09190.t01 | Wine grape | nucleus, plastid | 5.31 | 39.58 |
| CDX84904 | Canola | plastid | 3.82 | 38.32 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G257600.1 | EnsemblPlantsGene:TraesCS4D01G257600 | Gene3D:1.10.8.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:CUE | InterPro:IPR003892 | InterPro:UBA-like_sf | ncoils:Coil | PFAM:PF02845 | PFscan:PS51140 |
| SEG:seg | SMART:SM00546 | SUPFAM:SSF46934 | TIGR:cd14364 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr4D:+:427451059..427459364
Molecular Weight (calculated)
117025.0 Da
IEP (calculated)
6.612
GRAVY (calculated)
-0.808
Length
1073 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSAPPAHQS KPSYQRRPPN SGPRQQPPPQ QHQQQRYVPK SAAPSAPKPS PPPPLTTALR SSAAPSASGA GSSSGGGAAD GFVFYLPHDE AVAAGLGGLD
0101: AQESQAVVDL LNDALASLLR AKPREFWRQV AQNASLHAFL DSYLQFRHRW YDLPHRGPKG TVAGLVVGEL ELCRRVFMVL YRISSNKDPG SGPGESLSTK
0201: EHTALLQEKR LLDLPKLLDI CAIYGHDNGE LTSSLVTNAI VVQPNLLDGI NTVLPQFLDI FHTMQDRCMD SLQVLSSPGP NVSGHTQLQK DFSEVLDFVN
0301: DAIITLDAFA EAYQPAALLL CASFERGDRV EELLNTLASL YDLLLPSLLQ GFQVMSSSQS NGETSSESIL NDIVLGIRML SKRAVGFGWR LLEFCYLNDQ
0401: LKEEDVQAST KMFPAKVEDP MIRGEIIVQI LKDINREATY SSKGNPGKTF LQALQKEFQL MSRIGDIWNK GWIYMEDEQF QFISRLCGST VTSWNSVPGL
0501: PISSHGGELQ QKNEEAAVIE SKISQIRDLL PHYGKGFLAA CLEAYNQNPE EVIQRILDGT LHQDLLALDT SLQEMPQQKS APSVAKDKGK GVLVETIPNI
0601: ANKPHKVEAQ SSSVSSASKA PISYLSSVSS ASKAPASSVS SVPQGRFTRK TNDDLPNFAV LDPQKAKDAV KSAVLDSQYE YEDEYDDSFD DLGFSVAESS
0701: YEEAEGANDD AEGSSSGPRW ASQKKPQFYV KDGKNYSYKV AGSIAVSNAR EAAVLNNTQK DTIHGLGRGG NLPIGGNLPM GVPNRQHRVV EEEEGGHANS
0801: FSRGGSNPRG RGRGRRGGWD QGNPAEENEN SSGPQSFGRD GRRGGRNHGN LPEVNDGQQG FGRGARRGIR DEDNRQEMNN HSNVQQGFGR GARRGAREED
0901: NQPEVNNHPN AQQGFGRGAR RGDRDEDNRP AGNNHGQQGF GRGGRRGDRD EDNRPEGNNH GQQGFGRGGR RGDRDEDNRP EGNNHGQQGF GRGGRRGDRD
1001: EDNRPEVNNH GQQGFGRGAR RGDRNHDDPV EDNEDRNAAQ GFARGGPGPR GGGRNHNRRD QALRKHMQGM TGL
0101: AQESQAVVDL LNDALASLLR AKPREFWRQV AQNASLHAFL DSYLQFRHRW YDLPHRGPKG TVAGLVVGEL ELCRRVFMVL YRISSNKDPG SGPGESLSTK
0201: EHTALLQEKR LLDLPKLLDI CAIYGHDNGE LTSSLVTNAI VVQPNLLDGI NTVLPQFLDI FHTMQDRCMD SLQVLSSPGP NVSGHTQLQK DFSEVLDFVN
0301: DAIITLDAFA EAYQPAALLL CASFERGDRV EELLNTLASL YDLLLPSLLQ GFQVMSSSQS NGETSSESIL NDIVLGIRML SKRAVGFGWR LLEFCYLNDQ
0401: LKEEDVQAST KMFPAKVEDP MIRGEIIVQI LKDINREATY SSKGNPGKTF LQALQKEFQL MSRIGDIWNK GWIYMEDEQF QFISRLCGST VTSWNSVPGL
0501: PISSHGGELQ QKNEEAAVIE SKISQIRDLL PHYGKGFLAA CLEAYNQNPE EVIQRILDGT LHQDLLALDT SLQEMPQQKS APSVAKDKGK GVLVETIPNI
0601: ANKPHKVEAQ SSSVSSASKA PISYLSSVSS ASKAPASSVS SVPQGRFTRK TNDDLPNFAV LDPQKAKDAV KSAVLDSQYE YEDEYDDSFD DLGFSVAESS
0701: YEEAEGANDD AEGSSSGPRW ASQKKPQFYV KDGKNYSYKV AGSIAVSNAR EAAVLNNTQK DTIHGLGRGG NLPIGGNLPM GVPNRQHRVV EEEEGGHANS
0801: FSRGGSNPRG RGRGRRGGWD QGNPAEENEN SSGPQSFGRD GRRGGRNHGN LPEVNDGQQG FGRGARRGIR DEDNRQEMNN HSNVQQGFGR GARRGAREED
0901: NQPEVNNHPN AQQGFGRGAR RGDRDEDNRP AGNNHGQQGF GRGGRRGDRD EDNRPEGNNH GQQGFGRGGR RGDRDEDNRP EGNNHGQQGF GRGGRRGDRD
1001: EDNRPEVNNH GQQGFGRGAR RGDRNHDDPV EDNEDRNAAQ GFARGGPGPR GGGRNHNRRD QALRKHMQGM TGL
001: MSNRRSNRQD ENTRYVPKGH QQQKFVPKPM NPTPTSNSTP FPVSLSSSLR QSDSSGASSR VSASGGSRVR IGDQGQLVSS KSPAQGGGSF VNYLPQDEAV
101: AAGLGPDDGG LDPVESQGVV DLLNRELTRL LKLNPRDFWR EVASDASLHD FLDSFLQFRS RWYDFPFHGV KGIVAGVIVG ELELCRRVFM VLYRISSNRD
201: PGAKAADSLS QKDHEVLLQD KKLLDLPKLL DICAIYGHEN AELTKSLIEN AVKSQNGISE SLNMMLSHFL GILHTMHHRC TSSLETLVSS ANSEDHGRRQ
301: LHSDLLEVMD FINDGVVSLD AFISAYTPAV FILACPVETS YGSDELLRSL VRLHDSLLPS LHRGFQVLFK DEDHDSLSDI STSLNMLSTR IGSLCWKILD
401: ICYLSNDKFN HETSIPAVTK MFPSRVEDPM VRADILIQTF REISGLSEQS LESKNRLLQK IEKNYRIIDR LRSLQNAGWI SMEDEQLQYL SMIMLHSADT
501: FSMKESPLLL TDGRNAEELM DENAVVMQSK ISQIKDIFPE YGNGFLAACL EAYNQNPEEV IQRILEGTLH EDLQRLDTSL ETMPQPKSAP TLRSKDKGKG
601: KLIESDTSSS ASAIYTEKPI TRPSLPASSA SSATVGRFVR KPKDDTPSYK ILDARKESDR ERNAALLAQY EYDDEYDDSF DDLGLSIAES GTEESGAFGN
701: RAGSEPSDAP KWGSRKNPQF YVKDGKNYSY KVAGAVAVAN ANEASLVNEA EGDKILGLGR GGNIPLGAVR KLTEYQAQRD EKGQSNVNVN PSDGRENGRN
801: WRGVRGRGRG VVNREQPQEK SNESSNNNSE VNTEAENGGG RGRGRGRRGG GGGRNHNHKD RAMKKHIASV SGF
101: AAGLGPDDGG LDPVESQGVV DLLNRELTRL LKLNPRDFWR EVASDASLHD FLDSFLQFRS RWYDFPFHGV KGIVAGVIVG ELELCRRVFM VLYRISSNRD
201: PGAKAADSLS QKDHEVLLQD KKLLDLPKLL DICAIYGHEN AELTKSLIEN AVKSQNGISE SLNMMLSHFL GILHTMHHRC TSSLETLVSS ANSEDHGRRQ
301: LHSDLLEVMD FINDGVVSLD AFISAYTPAV FILACPVETS YGSDELLRSL VRLHDSLLPS LHRGFQVLFK DEDHDSLSDI STSLNMLSTR IGSLCWKILD
401: ICYLSNDKFN HETSIPAVTK MFPSRVEDPM VRADILIQTF REISGLSEQS LESKNRLLQK IEKNYRIIDR LRSLQNAGWI SMEDEQLQYL SMIMLHSADT
501: FSMKESPLLL TDGRNAEELM DENAVVMQSK ISQIKDIFPE YGNGFLAACL EAYNQNPEEV IQRILEGTLH EDLQRLDTSL ETMPQPKSAP TLRSKDKGKG
601: KLIESDTSSS ASAIYTEKPI TRPSLPASSA SSATVGRFVR KPKDDTPSYK ILDARKESDR ERNAALLAQY EYDDEYDDSF DDLGLSIAES GTEESGAFGN
701: RAGSEPSDAP KWGSRKNPQF YVKDGKNYSY KVAGAVAVAN ANEASLVNEA EGDKILGLGR GGNIPLGAVR KLTEYQAQRD EKGQSNVNVN PSDGRENGRN
801: WRGVRGRGRG VVNREQPQEK SNESSNNNSE VNTEAENGGG RGRGRGRRGG GGGRNHNHKD RAMKKHIASV SGF
Arabidopsis Description
Ubiquitin system component Cue protein [Source:UniProtKB/TrEMBL;Acc:B3H6L4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.