Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92676 | Sorghum | plastid | 91.61 | 90.68 |
| Os03t0205000-01 | Rice | plastid | 67.86 | 71.52 |
| TraesCS4B01G257700.1 | Wheat | plastid | 66.94 | 62.17 |
| TraesCS4D01G257600.1 | Wheat | plastid | 66.12 | 60.2 |
| HORVU4Hr1G069920.9 | Barley | cytosol | 57.83 | 60.17 |
| TraesCS4A01G047100.1 | Wheat | cytosol | 55.99 | 54.92 |
| GSMUA_Achr3P30080_001 | Banana | plastid | 44.01 | 51.31 |
| KRH52085 | Soybean | plastid | 41.56 | 47.82 |
| KRH61398 | Soybean | plastid | 40.94 | 47.45 |
| VIT_18s0001g09180.t01 | Wine grape | cytosol | 37.46 | 45.52 |
| AT1G27752.1 | Thale cress | nucleus, plastid | 40.53 | 45.36 |
| PGSC0003DMT400055441 | Potato | cytosol | 33.67 | 45.19 |
| Solyc04g077930.2.1 | Tomato | nucleus, plastid | 41.76 | 44.84 |
| CDY11766 | Canola | nucleus, plastid | 40.53 | 41.25 |
| CDX90107 | Canola | nucleus, plastid | 40.63 | 39.98 |
| Bra010919.1-P | Field mustard | nucleus, plastid | 41.15 | 39.84 |
| VIT_18s0001g09190.t01 | Wine grape | nucleus, plastid | 5.83 | 39.58 |
| CDX84904 | Canola | plastid | 4.2 | 38.32 |
| CDY11511 | Canola | plasma membrane | 10.64 | 38.1 |
Protein Annotations
| EnsemblPlants:Zm00001d028088_P003 | EnsemblPlants:Zm00001d028088_T003 | EnsemblPlantsGene:Zm00001d028088 | Gene3D:1.10.8.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:CUE | InterPro:IPR003892 | InterPro:UBA-like_sf | PANTHER:PTHR21494 | PANTHER:PTHR21494:SF0 |
| PFAM:PF02845 | PFscan:PS51140 | ProteinID:ONL94671.1 | SEG:seg | SMART:SM00546 | SUPFAM:SSF46934 |
| UniParc:UPI0008450AC6 | UniProt:A0A1D6JRW6 | MapMan:35.2 | : | : | : |
Description
Ubiquitin system component Cue protein
Coordinates
chr1:+:22599568..22606524
Molecular Weight (calculated)
106305.0 Da
IEP (calculated)
6.726
GRAVY (calculated)
-0.595
Length
977 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSAPPAHQS KPSPHRRQHH NLGPRSPPPP PPQSQRYVPK SAPAAAPKPS PPSQPSLTTA LRSSAASPSS SGSGGSSSGS VGVRSVDAFV AYLPHDEAVA
101: AGLGGLDAHE SQVVVDHLND ALAALLRAKP REFWLRVAQN TSLHEFLDSY LQFRHRWYDL PHRGPKGTVA GLVVGELELC RRVFMVLYRI SSNKDPGAGR
201: GESLSMKEHA ALLLEKKLLD LPKLLDICAI YEHDNGKLTS SLVTNVINVQ PSVLDDINIV IPQFLNIFHT MHDRCMTSLQ VLTSTGSIDN GYVQLQKDFM
301: EVLDFINDAI VTLDSFVGAY QPAALLFCTN FEMSYGVEEL LNALARLYSS LLPSLLHGFK VMPKSQSNAE ASLDSTLSDI PLAIRMLSKR TARFGWRLLH
401: YCYLNDQVRE HDAQTSTKMF PAKVEDPMIR GDILVQTLKD INRESTYSSQ VNHGNTFLQE LESEFQLMSQ IGDIRNKGWI YMDDEQFQFL SRLCGSTHTS
501: WNGISDLPVS SHGGELQQKD EETAMVESKI SQIRDLFPDY GKGFLSACLE AYNLNPEEVI QRILEGTLHQ DLLALDTSLE EMPHEKPAPT AVKDKGKGIL
601: VETVPQITKK PHKVAETHYF VQDGLSSATS SASQGPSSAI SPASLGPSSA ISSAFQGPSS AISSASLGPS SSISSVPKGR FTRKANDDLP DTAILDSKNA
701: KNAARSVILD SQYEYEDEYD DSFDDLGFSV VESSYEETDG VNDAEASSHG PRWSSQKKPQ FYVKDGKNYS YKVAGSVAVS SAREAAVMRQ TQKETIYGLG
801: RGGNVPFGVP NRQHIDVEAE EVGDADNSGR GSNSRGRGRK GGREGNRPEE NESSNGRGSG FGGKRGGWSQ GNPAEENWNP NGQQGFGRGG RRGGWNQGGP
901: AKEDGNSSGR QESFGRGARR GSMNHDQSAE DNEGHNNPAQ DFTRGPAPRG GHGRGGGRNH HRRDRAMKKH MQGLTGL
101: AGLGGLDAHE SQVVVDHLND ALAALLRAKP REFWLRVAQN TSLHEFLDSY LQFRHRWYDL PHRGPKGTVA GLVVGELELC RRVFMVLYRI SSNKDPGAGR
201: GESLSMKEHA ALLLEKKLLD LPKLLDICAI YEHDNGKLTS SLVTNVINVQ PSVLDDINIV IPQFLNIFHT MHDRCMTSLQ VLTSTGSIDN GYVQLQKDFM
301: EVLDFINDAI VTLDSFVGAY QPAALLFCTN FEMSYGVEEL LNALARLYSS LLPSLLHGFK VMPKSQSNAE ASLDSTLSDI PLAIRMLSKR TARFGWRLLH
401: YCYLNDQVRE HDAQTSTKMF PAKVEDPMIR GDILVQTLKD INRESTYSSQ VNHGNTFLQE LESEFQLMSQ IGDIRNKGWI YMDDEQFQFL SRLCGSTHTS
501: WNGISDLPVS SHGGELQQKD EETAMVESKI SQIRDLFPDY GKGFLSACLE AYNLNPEEVI QRILEGTLHQ DLLALDTSLE EMPHEKPAPT AVKDKGKGIL
601: VETVPQITKK PHKVAETHYF VQDGLSSATS SASQGPSSAI SPASLGPSSA ISSAFQGPSS AISSASLGPS SSISSVPKGR FTRKANDDLP DTAILDSKNA
701: KNAARSVILD SQYEYEDEYD DSFDDLGFSV VESSYEETDG VNDAEASSHG PRWSSQKKPQ FYVKDGKNYS YKVAGSVAVS SAREAAVMRQ TQKETIYGLG
801: RGGNVPFGVP NRQHIDVEAE EVGDADNSGR GSNSRGRGRK GGREGNRPEE NESSNGRGSG FGGKRGGWSQ GNPAEENWNP NGQQGFGRGG RRGGWNQGGP
901: AKEDGNSSGR QESFGRGARR GSMNHDQSAE DNEGHNNPAQ DFTRGPAPRG GHGRGGGRNH HRRDRAMKKH MQGLTGL
001: MSNRRSNRQD ENTRYVPKGH QQQKFVPKPM NPTPTSNSTP FPVSLSSSLR QSDSSGASSR VSASGGSRVR IGDQGQLVSS KSPAQGGGSF VNYLPQDEAV
101: AAGLGPDDGG LDPVESQGVV DLLNRELTRL LKLNPRDFWR EVASDASLHD FLDSFLQFRS RWYDFPFHGV KGIVAGVIVG ELELCRRVFM VLYRISSNRD
201: PGAKAADSLS QKDHEVLLQD KKLLDLPKLL DICAIYGHEN AELTKSLIEN AVKSQNGISE SLNMMLSHFL GILHTMHHRC TSSLETLVSS ANSEDHGRRQ
301: LHSDLLEVMD FINDGVVSLD AFISAYTPAV FILACPVETS YGSDELLRSL VRLHDSLLPS LHRGFQVLFK DEDHDSLSDI STSLNMLSTR IGSLCWKILD
401: ICYLSNDKFN HETSIPAVTK MFPSRVEDPM VRADILIQTF REISGLSEQS LESKNRLLQK IEKNYRIIDR LRSLQNAGWI SMEDEQLQYL SMIMLHSADT
501: FSMKESPLLL TDGRNAEELM DENAVVMQSK ISQIKDIFPE YGNGFLAACL EAYNQNPEEV IQRILEGTLH EDLQRLDTSL ETMPQPKSAP TLRSKDKGKG
601: KLIESDTSSS ASAIYTEKPI TRPSLPASSA SSATVGRFVR KPKDDTPSYK ILDARKESDR ERNAALLAQY EYDDEYDDSF DDLGLSIAES GTEESGAFGN
701: RAGSEPSDAP KWGSRKNPQF YVKDGKNYSY KVAGAVAVAN ANEASLVNEA EGDKILGLGR GGNIPLGAVR KLTEYQAQRD EKGQSNVNVN PSDGRENGRN
801: WRGVRGRGRG VVNREQPQEK SNESSNNNSE VNTEAENGGG RGRGRGRRGG GGGRNHNHKD RAMKKHIASV SGF
101: AAGLGPDDGG LDPVESQGVV DLLNRELTRL LKLNPRDFWR EVASDASLHD FLDSFLQFRS RWYDFPFHGV KGIVAGVIVG ELELCRRVFM VLYRISSNRD
201: PGAKAADSLS QKDHEVLLQD KKLLDLPKLL DICAIYGHEN AELTKSLIEN AVKSQNGISE SLNMMLSHFL GILHTMHHRC TSSLETLVSS ANSEDHGRRQ
301: LHSDLLEVMD FINDGVVSLD AFISAYTPAV FILACPVETS YGSDELLRSL VRLHDSLLPS LHRGFQVLFK DEDHDSLSDI STSLNMLSTR IGSLCWKILD
401: ICYLSNDKFN HETSIPAVTK MFPSRVEDPM VRADILIQTF REISGLSEQS LESKNRLLQK IEKNYRIIDR LRSLQNAGWI SMEDEQLQYL SMIMLHSADT
501: FSMKESPLLL TDGRNAEELM DENAVVMQSK ISQIKDIFPE YGNGFLAACL EAYNQNPEEV IQRILEGTLH EDLQRLDTSL ETMPQPKSAP TLRSKDKGKG
601: KLIESDTSSS ASAIYTEKPI TRPSLPASSA SSATVGRFVR KPKDDTPSYK ILDARKESDR ERNAALLAQY EYDDEYDDSF DDLGLSIAES GTEESGAFGN
701: RAGSEPSDAP KWGSRKNPQF YVKDGKNYSY KVAGAVAVAN ANEASLVNEA EGDKILGLGR GGNIPLGAVR KLTEYQAQRD EKGQSNVNVN PSDGRENGRN
801: WRGVRGRGRG VVNREQPQEK SNESSNNNSE VNTEAENGGG RGRGRGRRGG GGGRNHNHKD RAMKKHIASV SGF
Arabidopsis Description
Ubiquitin system component Cue protein [Source:UniProtKB/TrEMBL;Acc:B3H6L4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.