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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • nucleus 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G309500.1 Wheat cytosol, plastid 91.2 96.03
TraesCS4B01G311700.1 Wheat cytosol, plastid 90.81 95.62
TraesCS4A01G411600.1 Wheat plasma membrane 90.92 95.47
HORVU3Hr1G069360.1 Barley extracellular 3.28 95.24
KXG40179 Sorghum plasma membrane 82.5 86.87
Zm00001d027665_P004 Maize plasma membrane 78.57 80.46
GSMUA_Achr1P01290_001 Banana peroxisome 35.1 66.46
CDY67451 Canola cytosol, peroxisome 42.65 63.47
GSMUA_Achr1P01300_001 Banana plastid 28.59 63.01
CDY63988 Canola cytosol 54.89 61.82
KRG96062 Soybean plasma membrane 57.41 61.4
Solyc09g008490.2.1 Tomato extracellular 57.68 60.95
AT2G36810.1 Thale cress cytosol 56.37 60.08
Bra017223.1-P Field mustard cytosol 43.79 59.96
KRH67779 Soybean extracellular 2.52 58.23
Os03t0146600-01 Rice plasma membrane 2.08 57.58
VIT_08s0007g04630.t01 Wine grape nucleus, plastid 58.39 55.6
CDY57715 Canola plasma membrane 5.96 32.34
Protein Annotations
EnsemblPlants:HORVU4Hr1G079420.8EnsemblPlantsGene:HORVU4Hr1G079420GO:GO:0003674GO:GO:0005488InterPro:ARM-type_foldPANTHER:PTHR23120
PANTHER:PTHR23120:SF0SEG:segSUPFAM:SSF48371UniParc:UPI000B47AA01UniProt:A0A287PU69MapMan:35.1
Description
No Description!
Coordinates
chrchr4H:+:612083666..612108450
Molecular Weight (calculated)
202398.0 Da
IEP (calculated)
6.977
GRAVY (calculated)
0.052
Length
1829 amino acids
Sequence
(BLAST)
0001: PCQLPSFPRP PSAAPGWTDL TTHRVTPPRT RTPLSCPARL APPPPRPPRR GADLFRLLHG FLLLGRGVGG RARGRAGPRR LPRRRLPARP RLRPRRAPRD
0101: RAAVRIAPSP PIPSQRAQPA APYVRMNDPL LVAGCRNPLL VLDCCATVSR GGHRRFGNMA GVFLVMASAV RALDRRDAER EFLRKIAKIA TAEIVSSKDF
0201: NVDWQRAAAT LLVAIGSHDP DLMMEEIFLY FSGPTSALPA MLQILADFAS AEALQFTPRL KDVLLRVLPI LGSVRDGQRP VFANAFKCWC QAAWVYIGDA
0301: SSGLPFDDDV MSFMNSVFEL LLKVWTGSRD LKVRLSSVEA LGEMVGLVTR SQLKSALPRI IPTMLDLCKK DQEVAFTAAH SLHNLLSASL LSESGPPLLE
0401: FEELTVVLIT LLPLVSVNIS KDERSYISKG LKTYNELQHC FLVTGLAYPE DLCMFLLSKC KSKDEASIVG ALGTIKHLLP RLLESWHTKQ TLLVEIVKSL
0501: TQEQSLGIRM ALAELIVVMA SHCYLSGHPA ELAVEFLVRH SAITDDDLND LNTLKNEYFQ DKRFEMKISL AGLSELRAVC EKGLLLLAIT IPEMELVLWP
0601: FLLQLIIPKK YTGAVATVCK CITELCRHKL SQANPLYTEF NASNEMPSPE DLFARLLVLL HNPLARGQLA TQILTVLCYL GQLFPRNLSL FWEDEVPKMK
0701: AYISDPEDLK QDSTYQEIWD AMIINFLVES LDVVNDNVWV ISLGDAFARQ YDLYATSDGH SALLHRCLGM LLQKVDDRIY VREKIDWMCR HSSMSIPVNR
0801: LGLAQGIGLV AASHLDTVLE KLKNILENAG QSSLQRFLSF FSFREKVEDV DDTYAALALM YGYAARYAPS TVIEARINAL VGTDMLGRFL HVQHPTAKQA
0901: VITAIDLLGR AVISAAEMGI SFPLKRRDQL LEYVLTLMGR DQSDDLVDFS IELLQTQSVA LSACTTLVSI EPRLPMETRN RVMKATLGFF ALPTEPSNIV
1001: ESLITNLIIL LGAILLTSGE DGRSRAEQLL HILRQLDPYI SSSAEHQRRR GCVAVHEVLI KFRNLCSGGF GAMGSYPTLS LKQIDQGGPR GSSSLPSAFV
1101: LPNRDSLSLG ERIMAYLPRC ADTDDEVRKV AIQIIALFFN ISLSLPKQKA SANDIDLESS YGALSSLEDI VSIIRRNASV DQIEVFHRVV SSVCILLSKD
1201: ELVVLLHSCT LATCDKVKQS ADGSIQAIIV FIIRRGKDLR EADVLRTTQS LLSSAVALTD KHSRREVLNA ISCLAENTNH IVVFDEVLFV AGRDICTKDI
1301: TRIRGGWAIQ DVFYAFSQHK VLATLFLEYI LSILHKEPVA TNDSEKGETN SESSADDCIL QATMFALNAF LRGGGKVGKQ AVEQSYPSVL SALILKLGAL
1401: HGLAELGRNE LLRSLLIAFQ SFCECVGDVE MGKILARDGE QTEKEKWIDL VQEVACSSSV KRPNEVLPTC VILSKSLDRN QRAEREAAAA ALSEFVRHSE
1501: KEPALLEQMV EELCQHVTDD SPTVRSLCLR GLVQIPESHI LNYIQQVLGV ILALLEDATE SVQLTAVQCL LTVLNASEQD AVDPILISLL VRLRNLQISM
1601: NTKMRSNAFA AYGALSAYGA GSQHHAFLEQ THATLPRLIL HLHDNDLSVR LACRNTFQLL APLMEVDGLS SLLNKQYFTS DRRSDYEDFI RDLTRQLCRL
1701: SPARVDSYLE SAIQAFDAPW PVIQANAVCL VSCMLSFLDD QRFLAPYFSQ VFAMLVGRMS QSPEAVVRAA ASSALGLLIK RSNMLKSLSS RFDRTDPSQS
1801: SQHGEPHAKA SPELQEEAAA KPNGAQGEQ
Best Arabidopsis Sequence Match ( AT2G36810.2 )
(BLAST)
0001: MASSSLGSSI PAPEAVQLLV SSLADDSSVV REASMASLRD IASLNPLLVL DCCYAVSRGG RRRFGNMAGV FQVMAFSVGA LEKGESDSVF MGKLAKIATA
0101: EIISSKELNA DWQRQASGLL VSIGTHFPDL MMEEIFLHLS GPATAAPAMV QILADFASSD ALQFTPRLKG VLSKVSPILG NVRDIHRPIF ANAFKCWSQA
0201: VWLYITDLTS DSPLDSDVMS FLNSVFELLL RVWAVSRDHK VRVSTVDALG QMVGLITRTQ LKSALPRLIP AILELYKKDH DDALLATCSL HNLLNASLLS
0301: ESGPPLLDFE DLTIVLSTLL PVIGINNERK RFSDISVGRK TYNEVQRCFL TVGLVYPEDL FTFLLNKCKL KEDPLTFGAL CILKHLLPRL FEAWHSKRPL
0401: LVDTASSLLD EQSLAVRKAL SELIVVMASH CYLVGPSGEL FVEYLVRHSA IGESDHLKAK GELVSPTQLR AVCGKGLLLL TVTIPEMEYI LWPFLLKMII
0501: PKVYTGAVAS VCRCITELCR RRSSTTPMLI ECKARADIPN PEELFTRLVV LLHNPLAKEQ LASQILTVLG YLSPLFPKNI SMFWQDEIPK MKAYVYDTED
0601: LKLDPTYQET WDDMIINFLA ESLDVTQDAD WVISLGNSFA KQYILYAPDD DHAALLHRCI GILLQKVNDR AYVRDKIDWM YEQADISIPA NRLGLAKAMG
0701: LVAASHLDTV LEKLKIIVDN VGQSIFQRIL SLFSESYKTE DSDDIHAALA LMYGYAAKYA PSSVIEARID ALVGTNMLSR LLHVRQQTAK QAVITAIDLL
0801: GRAVINAAET GATFPLKRRD QMLDYILTLM GRDENEGFAE SSLEVLHTQA LALNACTTLV SVEPKLTIET RNRVMKATLG FFALPNDPSD VISPLIDNLV
0901: TLLCAILLTS GEDGRSRAEQ LLHLLRQLDQ YVSSPIDYQR KRGCVAVHEM LLKFRKLCVG GYCALGCSGD CPHRKYADRS MQGNFSNLPS VFLFPDREVL
1001: CLGDRVITYL PRCADTNSEV RKISAQILDQ FFSISLSLPK AVLTSGLDSE DSYKALSSLE DVIAILKSDA SIDPSEVFNR IVSSICSLLT EHELVAALHS
1101: CTAAICDKIR QSAEGAIQAV TEFVSRRGSQ LSDNDISRTT HSLLSAAVHI TDKNLRVEAI GAISALAENT QSSIVFNEVL ATAGKDIVTK DITRMRGGWP
1201: MQDAFYAFSQ HTELSVLFME HLISILNRSS LVKSDSHKGE NTSSSSETHV EDDILQAAIF ALTAFFRGGG KIGKKAVEKS YSSVVGALTL QLGSCHGLAS
1301: SGQQDPLRVL LTSFQAFCEC VGDLEMGKIL ARNGEQIEKE KWVGLIGDIA GCISIKRPKE VRHICMILTK ALNRPQRFQR EAAAAALSEF IRYSGDFSSV
1401: MEEMVEALCR HVSDDSPTVR RLCLRGLVQM PSACMSHYTT QVIGVILALL DDLDESVQLT AVSCLLMVTE SASNDAVEPI LLNLSVRLRN LQVSMDPKMR
1501: ANAFSALGAL SKYATGGQRE GFVEQIHSTL PRLVVHLHDD DPSIRQACRV TLKRFAPLVD IINYSTLYDS RAFGSEDRTD YENFVRDLSK HLVQESERVD
1601: TYMASTIQAF DAPWPVIQAN AIHFSTTMLS LSEDQHIISL YYPQVFETLV SKMTRSQDSV VRAACSSAFG LLLRSSKSTL WRGARLDGTD SGRKANDLES
1701: VKK
Arabidopsis Description
SGR6Protein SHOOT GRAVITROPISM 6 [Source:UniProtKB/Swiss-Prot;Acc:F4IP13]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.