Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
29876421
|
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG96062 | Soybean | plasma membrane | 73.25 | 74.15 |
| CDY67451 | Canola | cytosol, peroxisome | 51.24 | 72.17 |
| CDY63988 | Canola | cytosol | 66.55 | 70.94 |
| Bra017223.1-P | Field mustard | cytosol | 54.36 | 70.43 |
| AT2G36810.1 | Thale cress | cytosol | 69.61 | 70.22 |
| GSMUA_Achr1P01290_001 | Banana | peroxisome | 36.92 | 66.15 |
| VIT_08s0007g04630.t01 | Wine grape | nucleus, plastid | 73.02 | 65.8 |
| KXG40179 | Sorghum | plasma membrane | 62.45 | 62.23 |
| KRH67779 | Soybean | extracellular | 2.83 | 62.03 |
| TraesCS4D01G309500.1 | Wheat | cytosol, plastid | 62.1 | 61.89 |
| TraesCS4B01G311700.1 | Wheat | cytosol, plastid | 61.99 | 61.77 |
| TraesCS4A01G411600.1 | Wheat | plasma membrane | 61.81 | 61.42 |
| GSMUA_Achr1P01300_001 | Banana | plastid | 28.65 | 59.76 |
| Zm00001d027665_P004 | Maize | plasma membrane | 59.85 | 58.01 |
| HORVU4Hr1G079420.8 | Barley | plastid | 60.95 | 57.68 |
| HORVU3Hr1G069360.1 | Barley | extracellular | 1.91 | 52.38 |
| CDY57715 | Canola | plasma membrane | 7.22 | 37.09 |
| Zm00001d048436_P001 | Maize | cytosol | 6.87 | 35.0 |
| Os03t0146600-01 | Rice | plasma membrane | 1.27 | 33.33 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Cnd1_C | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005319 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 |
| GO:GO:0009605 | GO:GO:0009606 | GO:GO:0009628 | GO:GO:0009630 | GO:GO:0009660 | GO:GO:0009705 |
| GO:GO:0009959 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | InterPro:IPR011989 | UniProt:K4CQN7 |
| PFAM:PF12717 | PANTHER:PTHR23120 | PANTHER:PTHR23120:SF0 | SUPFAM:SSF48371 | EnsemblPlantsGene:Solyc09g008490.2 | EnsemblPlants:Solyc09g008490.2.1 |
| UniParc:UPI000276BEFD | SEG:seg | : | : | : | : |
Description
Protein SHOOT GRAVITROPISM 6 [Source:Projected from Arabidopsis thaliana (AT2G36810) UniProtKB/Swiss-Prot;Acc:F4IP13]
Coordinates
chr9:+:1945871..1983208
Molecular Weight (calculated)
191552.0 Da
IEP (calculated)
6.410
GRAVY (calculated)
0.096
Length
1731 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASSSSGNSV PAAEAVQVLV SSLADDSLIV REASMAALKE ITFLNPLLVL DCCLTVSRGG RRRFGNIAGL FQVMSVAIQA LDKGDVDHNY LAKLAKIATS
0101: EVISTKELNA DWQRAAAGVL VSIGSHMPDL MMEEIFLHLS GSNSALPAMV QILADFASAD ALQFTPHLKG ILARVVPILG NVRDIHRPIF ANAFKCWCQS
0201: CWQCSVDFPL SSVVDADIMS FLNSAFELLL RVWAISRDLK VRLSSVEALG QMVGLITRTQ LKAALPRLIP TILELYKRDQ DDVAFVATCS LHNLLNASLL
0301: SENGPPLLDF EDLSITLSTL LPVVCRSSDK KEHSDFSVGL KTYNEVQHCF LTVGLVYPED LFVFLLNKCK MKEEPLAVGA LSVLKHLLPR LSEAWHSKRP
0401: LLIEVVKLLL DELNLGVCKA LAELIVVMAS HCYLVGSSGE MFIEYLVRHS AMFGLHRDDT ERSRELNSSP GGYYPFVYKK VEMKMDAVTL SELRAICEKG
0501: LLLITVTVPE MEHVLWPFLL KLIIPRVYTG AVATVCRCIS ELCRRRSSQS GASVLECKAR ADIPHPEELF ARLIVLLHNP LAREQLATQI LTVLCYLAPL
0601: FPKNINMFWQ DEIPKMKAYV SDTEDLKQDP SYQESWDDMI INFIAESLDV IQDVDWVISL GNAFEKHYEL YKPDDEHSAL LHRCLGILLQ KVHTRAYVRA
0701: KIDLMYKQAN ITIPTNRLGL AKAMGLVAAS HLDTVLDKLK DILDNVGQSI FQRFLSFFSD KAKMEESDDI HAALALMYGY AAKYAPSTVI EARIDALVGV
0801: NMLSRLLHVR HPTAKQAVIT AIDLLGQAVI NAAESGISFP LKRRDQLLDY ILTLMGTDEE DGFSESNIEH LRTQSLALSA CTTLVSVEPK LTTETRNLVM
0901: KATIGFFGLP NEPADVIDPL IGNLITLLCT ILITSGEDGR SRAEQLLQIL RKVDQYVSSS LDYQRKRGCL AAHELLFKFR MICISGYCAL GCRGTCTHRE
1001: KTDRAMHHTL SNLPSAFALP SRDALRLGDR TMMYLPRCVD TNSEVRKVSV QILHLYFSIS LSLPRPVNSS FSNDIELSYS ALSSLEDVIS ILRSDASIDP
1101: SEVFNRVVSS VCILLTKDEL AAALHGCSGA ICDKVKQSSE GAIQAVNEFV MKRGNELNET DIARTTQSLL SAVIHVNEKY LRQEALGAIC SFAENTSSRI
1201: VFNEVLVAAR KDIARKDISR LRGGWPIQDA FHVFSQHSVL SYLFLDHVMS VINQIPTLGG DWGHDESSSH AVDTTLEDNI ARAAIVALTA FFRGGGKVGK
1301: KAVEQSYASV LATLTLQLGS CHGLASTGEL EPLRALLAAF QAFCECVGDL EMGKILARDG EQNENEKWIN LIRDLAGCIS IKRPKEVPSI CLILSNALDR
1401: SLRFQRESAA AALSEFLRHS DGFGPLLEQM VQALCRHVSD DSPTVRRLCL RGLVQMPSIH VLQYTTQILG VILALLDDSD ESVQLTAVSC LLMVLESSSR
1501: DAVEPVLLNL SIRLRNLQEC MNEKIRANAY AAFGALSTYG SGPQQDSFLE QAHAAFPRMV LHLHEDDLSV RQACRNTLKS IAPLMEIDGI TAVFNSHWFS
1601: SDHRGDYEDF LRELARQLTQ NLAARVDRYM ASIIQAFDAP WPVVQANAVY LCSSVLSLSD DKHISSHYYN QVFGMLVGKM SRSTDAIVRA TCSSALGLLL
1701: KSSNASSWKD IRLDRADSSH RGHEPESARR L
0101: EVISTKELNA DWQRAAAGVL VSIGSHMPDL MMEEIFLHLS GSNSALPAMV QILADFASAD ALQFTPHLKG ILARVVPILG NVRDIHRPIF ANAFKCWCQS
0201: CWQCSVDFPL SSVVDADIMS FLNSAFELLL RVWAISRDLK VRLSSVEALG QMVGLITRTQ LKAALPRLIP TILELYKRDQ DDVAFVATCS LHNLLNASLL
0301: SENGPPLLDF EDLSITLSTL LPVVCRSSDK KEHSDFSVGL KTYNEVQHCF LTVGLVYPED LFVFLLNKCK MKEEPLAVGA LSVLKHLLPR LSEAWHSKRP
0401: LLIEVVKLLL DELNLGVCKA LAELIVVMAS HCYLVGSSGE MFIEYLVRHS AMFGLHRDDT ERSRELNSSP GGYYPFVYKK VEMKMDAVTL SELRAICEKG
0501: LLLITVTVPE MEHVLWPFLL KLIIPRVYTG AVATVCRCIS ELCRRRSSQS GASVLECKAR ADIPHPEELF ARLIVLLHNP LAREQLATQI LTVLCYLAPL
0601: FPKNINMFWQ DEIPKMKAYV SDTEDLKQDP SYQESWDDMI INFIAESLDV IQDVDWVISL GNAFEKHYEL YKPDDEHSAL LHRCLGILLQ KVHTRAYVRA
0701: KIDLMYKQAN ITIPTNRLGL AKAMGLVAAS HLDTVLDKLK DILDNVGQSI FQRFLSFFSD KAKMEESDDI HAALALMYGY AAKYAPSTVI EARIDALVGV
0801: NMLSRLLHVR HPTAKQAVIT AIDLLGQAVI NAAESGISFP LKRRDQLLDY ILTLMGTDEE DGFSESNIEH LRTQSLALSA CTTLVSVEPK LTTETRNLVM
0901: KATIGFFGLP NEPADVIDPL IGNLITLLCT ILITSGEDGR SRAEQLLQIL RKVDQYVSSS LDYQRKRGCL AAHELLFKFR MICISGYCAL GCRGTCTHRE
1001: KTDRAMHHTL SNLPSAFALP SRDALRLGDR TMMYLPRCVD TNSEVRKVSV QILHLYFSIS LSLPRPVNSS FSNDIELSYS ALSSLEDVIS ILRSDASIDP
1101: SEVFNRVVSS VCILLTKDEL AAALHGCSGA ICDKVKQSSE GAIQAVNEFV MKRGNELNET DIARTTQSLL SAVIHVNEKY LRQEALGAIC SFAENTSSRI
1201: VFNEVLVAAR KDIARKDISR LRGGWPIQDA FHVFSQHSVL SYLFLDHVMS VINQIPTLGG DWGHDESSSH AVDTTLEDNI ARAAIVALTA FFRGGGKVGK
1301: KAVEQSYASV LATLTLQLGS CHGLASTGEL EPLRALLAAF QAFCECVGDL EMGKILARDG EQNENEKWIN LIRDLAGCIS IKRPKEVPSI CLILSNALDR
1401: SLRFQRESAA AALSEFLRHS DGFGPLLEQM VQALCRHVSD DSPTVRRLCL RGLVQMPSIH VLQYTTQILG VILALLDDSD ESVQLTAVSC LLMVLESSSR
1501: DAVEPVLLNL SIRLRNLQEC MNEKIRANAY AAFGALSTYG SGPQQDSFLE QAHAAFPRMV LHLHEDDLSV RQACRNTLKS IAPLMEIDGI TAVFNSHWFS
1601: SDHRGDYEDF LRELARQLTQ NLAARVDRYM ASIIQAFDAP WPVVQANAVY LCSSVLSLSD DKHISSHYYN QVFGMLVGKM SRSTDAIVRA TCSSALGLLL
1701: KSSNASSWKD IRLDRADSSH RGHEPESARR L
0001: MASSSLGSSI PAPEAVQLLV SSLADDSSVV REASMASLRD IASLNPLLVL DCCYAVSRGG RRRFGNMAGV FQVMAFSVGA LEKGESDSVF MGKLAKIATA
0101: EIISSKELNA DWQRQASGLL VSIGTHFPDL MMEEIFLHLS GPATAAPAMV QILADFASSD ALQFTPRLKG VLSKVSPILG NVRDIHRPIF ANAFKCWSQA
0201: VWLYITDLTS DSPLDSDVMS FLNSVFELLL RVWAVSRDHK VRVSTVDALG QMVGLITRTQ LKSALPRLIP AILELYKKDH DDALLATCSL HNLLNASLLS
0301: ESGPPLLDFE DLTIVLSTLL PVIGINNERK RFSDISVGRK TYNEVQRCFL TVGLVYPEDL FTFLLNKCKL KEDPLTFGAL CILKHLLPRL FEAWHSKRPL
0401: LVDTASSLLD EQSLAVRKAL SELIVVMASH CYLVGPSGEL FVEYLVRHSA IGESDHLKAK GELVSPTQLR AVCGKGLLLL TVTIPEMEYI LWPFLLKMII
0501: PKVYTGAVAS VCRCITELCR RRSSTTPMLI ECKARADIPN PEELFTRLVV LLHNPLAKEQ LASQILTVLG YLSPLFPKNI SMFWQDEIPK MKAYVYDTED
0601: LKLDPTYQET WDDMIINFLA ESLDVTQDAD WVISLGNSFA KQYILYAPDD DHAALLHRCI GILLQKVNDR AYVRDKIDWM YEQADISIPA NRLGLAKAMG
0701: LVAASHLDTV LEKLKIIVDN VGQSIFQRIL SLFSESYKTE DSDDIHAALA LMYGYAAKYA PSSVIEARID ALVGTNMLSR LLHVRQQTAK QAVITAIDLL
0801: GRAVINAAET GATFPLKRRD QMLDYILTLM GRDENEGFAE SSLEVLHTQA LALNACTTLV SVEPKLTIET RNRVMKATLG FFALPNDPSD VISPLIDNLV
0901: TLLCAILLTS GEDGRSRAEQ LLHLLRQLDQ YVSSPIDYQR KRGCVAVHEM LLKFRKLCVG GYCALGCSGD CPHRKYADRS MQGNFSNLPS VFLFPDREVL
1001: CLGDRVITYL PRCADTNSEV RKISAQILDQ FFSISLSLPK AVLTSGLDSE DSYKALSSLE DVIAILKSDA SIDPSEVFNR IVSSICSLLT EHELVAALHS
1101: CTAAICDKIR QSAEGAIQAV TEFVSRRGSQ LSDNDISRTT HSLLSAAVHI TDKNLRVEAI GAISALAENT QSSIVFNEVL ATAGKDIVTK DITRMRGGWP
1201: MQDAFYAFSQ HTELSVLFME HLISILNRSS LVKSDSHKGE NTSSSSETHV EDDILQAAIF ALTAFFRGGG KIGKKAVEKS YSSVVGALTL QLGSCHGLAS
1301: SGQQDPLRVL LTSFQAFCEC VGDLEMGKIL ARNGEQIEKE KWVGLIGDIA GCISIKRPKE VRHICMILTK ALNRPQRFQR EAAAAALSEF IRYSGDFSSV
1401: MEEMVEALCR HVSDDSPTVR RLCLRGLVQM PSACMSHYTT QVIGVILALL DDLDESVQLT AVSCLLMVTE SASNDAVEPI LLNLSVRLRN LQVSMDPKMR
1501: ANAFSALGAL SKYATGGQRE GFVEQIHSTL PRLVVHLHDD DPSIRQACRV TLKRFAPLVD IINYSTLYDS RAFGSEDRTD YENFVRDLSK HLVQESERVD
1601: TYMASTIQAF DAPWPVIQAN AIHFSTTMLS LSEDQHIISL YYPQVFETLV SKMTRSQDSV VRAACSSAFG LLLRSSKSTL WRGARLDGTD SGRKANDLES
1701: VKK
0101: EIISSKELNA DWQRQASGLL VSIGTHFPDL MMEEIFLHLS GPATAAPAMV QILADFASSD ALQFTPRLKG VLSKVSPILG NVRDIHRPIF ANAFKCWSQA
0201: VWLYITDLTS DSPLDSDVMS FLNSVFELLL RVWAVSRDHK VRVSTVDALG QMVGLITRTQ LKSALPRLIP AILELYKKDH DDALLATCSL HNLLNASLLS
0301: ESGPPLLDFE DLTIVLSTLL PVIGINNERK RFSDISVGRK TYNEVQRCFL TVGLVYPEDL FTFLLNKCKL KEDPLTFGAL CILKHLLPRL FEAWHSKRPL
0401: LVDTASSLLD EQSLAVRKAL SELIVVMASH CYLVGPSGEL FVEYLVRHSA IGESDHLKAK GELVSPTQLR AVCGKGLLLL TVTIPEMEYI LWPFLLKMII
0501: PKVYTGAVAS VCRCITELCR RRSSTTPMLI ECKARADIPN PEELFTRLVV LLHNPLAKEQ LASQILTVLG YLSPLFPKNI SMFWQDEIPK MKAYVYDTED
0601: LKLDPTYQET WDDMIINFLA ESLDVTQDAD WVISLGNSFA KQYILYAPDD DHAALLHRCI GILLQKVNDR AYVRDKIDWM YEQADISIPA NRLGLAKAMG
0701: LVAASHLDTV LEKLKIIVDN VGQSIFQRIL SLFSESYKTE DSDDIHAALA LMYGYAAKYA PSSVIEARID ALVGTNMLSR LLHVRQQTAK QAVITAIDLL
0801: GRAVINAAET GATFPLKRRD QMLDYILTLM GRDENEGFAE SSLEVLHTQA LALNACTTLV SVEPKLTIET RNRVMKATLG FFALPNDPSD VISPLIDNLV
0901: TLLCAILLTS GEDGRSRAEQ LLHLLRQLDQ YVSSPIDYQR KRGCVAVHEM LLKFRKLCVG GYCALGCSGD CPHRKYADRS MQGNFSNLPS VFLFPDREVL
1001: CLGDRVITYL PRCADTNSEV RKISAQILDQ FFSISLSLPK AVLTSGLDSE DSYKALSSLE DVIAILKSDA SIDPSEVFNR IVSSICSLLT EHELVAALHS
1101: CTAAICDKIR QSAEGAIQAV TEFVSRRGSQ LSDNDISRTT HSLLSAAVHI TDKNLRVEAI GAISALAENT QSSIVFNEVL ATAGKDIVTK DITRMRGGWP
1201: MQDAFYAFSQ HTELSVLFME HLISILNRSS LVKSDSHKGE NTSSSSETHV EDDILQAAIF ALTAFFRGGG KIGKKAVEKS YSSVVGALTL QLGSCHGLAS
1301: SGQQDPLRVL LTSFQAFCEC VGDLEMGKIL ARNGEQIEKE KWVGLIGDIA GCISIKRPKE VRHICMILTK ALNRPQRFQR EAAAAALSEF IRYSGDFSSV
1401: MEEMVEALCR HVSDDSPTVR RLCLRGLVQM PSACMSHYTT QVIGVILALL DDLDESVQLT AVSCLLMVTE SASNDAVEPI LLNLSVRLRN LQVSMDPKMR
1501: ANAFSALGAL SKYATGGQRE GFVEQIHSTL PRLVVHLHDD DPSIRQACRV TLKRFAPLVD IINYSTLYDS RAFGSEDRTD YENFVRDLSK HLVQESERVD
1601: TYMASTIQAF DAPWPVIQAN AIHFSTTMLS LSEDQHIISL YYPQVFETLV SKMTRSQDSV VRAACSSAFG LLLRSSKSTL WRGARLDGTD SGRKANDLES
1701: VKK
Arabidopsis Description
SGR6Protein SHOOT GRAVITROPISM 6 [Source:UniProtKB/Swiss-Prot;Acc:F4IP13]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.