Factsheet for GSMUA_Achr1P01290_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
peroxisome 2
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67451	Canola	cytosol, peroxisome	60.66	47.68
KXG40179	Sorghum	plasma membrane	68.74	38.23
TraesCS4D01G309500.1	Wheat	cytosol, plastid	67.91	37.77
TraesCS4B01G311700.1	Wheat	cytosol, plastid	67.81	37.71
TraesCS4A01G411600.1	Wheat	plasma membrane	67.91	37.66
Zm00001d027665_P004	Maize	plasma membrane	69.05	37.35
KRG96062	Soybean	plasma membrane	65.73	37.13
Solyc09g008490.2.1	Tomato	extracellular	66.15	36.92
AT2G36810.1	Thale cress	cytosol	65.42	36.83
CDY63988	Canola	cytosol	60.66	36.08
HORVU4Hr1G079420.8	Barley	plastid	66.46	35.1
VIT_08s0007g04630.t01	Wine grape	nucleus, plastid	64.49	32.43
Bra017223.1-P	Field mustard	cytosol	43.06	31.14
HORVU3Hr1G069360.1	Barley	extracellular	0.31	4.76
CDY57715	Canola	plasma membrane	0.72	2.08
Zm00001d048436_P001	Maize	cytosol	0.21	0.59
GSMUA_Achr1P01300_001	Banana	plastid	0.31	0.36
Os03t0146600-01	Rice	plasma membrane	0.0	0.0
KRH67779	Soybean	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr1P01290_001	EnsemblPlants:GSMUA_Achr1T01290_001	EnsemblPlantsGene:GSMUA_Achr1G01290_001	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-type_fold
PANTHER:PTHR23120	PANTHER:PTHR23120:SF0	SEG:seg	SUPFAM:SSF48371	UniParc:UPI000295794E	UniProt:M0RW37
MapMan:35.1	:	:	:	:	:

Description

Putative HEAT repeat-containing protein 7A homolog [Source:GMGC_GENE;Acc:GSMUA_Achr1G01290_001]

Coordinates

chr1:+:971860..1003704

Molecular Weight (calculated)

107721.0 Da

IEP (calculated)

6.375

GRAVY (calculated)

0.222

Length

966 amino acids

Sequence
(BLAST)

001: MASAGRPYLA AAVMRELKRK VSGSGMERKR ASFRFLHFFL AEAVQVLVSS LVDESLVVRE SSLAALREIA PLNPLLVIDC CVSISKGGRR RFGNMAGVFL
101: VMAGAVRAMD PKDVDSTYMA KLAKIATSEI ITSKELNADW QRAAAGLLVS IGSHAPDLMM EEVFLHLSGP NSALQSMVQI LADFASAEAL KFTPHLKDVL
201: LRVLPILGSV RDTQRPVFAN AFKCWCQAAW QYIGDFPSDP LLDSDVMSFM NSVFELLLRV WAGSRDLKVR LSAVDALGQM VGLITRSQLK AGLPRLIPTI
301: LDLYKKDQEI AFLATQSLHN LLTACLLSES GPPLLDFEEL TVILCTLLPV ACINSQTDHR LNFSMGLKTY NEIQHCFLVI GSVYPEDLCV FLLNKCQSKD
401: ELSTIGALYA VKHLLPRLLE AWHGKRVSLV EVVKLLVDEQ SLGVRKALAE LIVVMASHCY LSGPPAELFV EYLVRHCAIS DQEIKIFKSL KEASSRGSPF
501: QSFQNRNLKV MVGAVSPSEL RVICEKGLLL LAITIPEMEH ILWPFILKML LPKEYTGAVA TVCKCITELC RHRSFHTSMI SCEFNNSNDI PSPEDLFARL
601: IVLMHDPVAR EQLATQILTV LCFLGPLFPK NLSFFWQDEV PKMKAYISDL DDLRQDSSYQ ETWDDMIVNF LSESLDVVQD NEWILSLGNA FARQYALYDD
701: DDEHLALLHR CLGMLLQKVD DRVYVNGKIE WMYAHANISV PTNRLGLAKG MGLIAASHLD TVLEKLKCIL DNVGYSRFQR FFSFLSGRVL EDADDTYAAL
801: ALMYGYAARY APSTVIEARI NALVGTNMLS RLLHVQHPTA KQAIITAIDL LGRAVINAAE MGISFPLKRR DQMLDYVLTL MGRDDREELI DSSTELLHTQ
901: IHFQTLALSA CKTLVLVEPR LPVEARNHVM KATLGFFALP SDPSDIIDPL VDNLISLLCA ILLTRY

Best Arabidopsis Sequence Match ( AT2G36810.2 )
(BLAST)

0001: MASSSLGSSI PAPEAVQLLV SSLADDSSVV REASMASLRD IASLNPLLVL DCCYAVSRGG RRRFGNMAGV FQVMAFSVGA LEKGESDSVF MGKLAKIATA
0101: EIISSKELNA DWQRQASGLL VSIGTHFPDL MMEEIFLHLS GPATAAPAMV QILADFASSD ALQFTPRLKG VLSKVSPILG NVRDIHRPIF ANAFKCWSQA
0201: VWLYITDLTS DSPLDSDVMS FLNSVFELLL RVWAVSRDHK VRVSTVDALG QMVGLITRTQ LKSALPRLIP AILELYKKDH DDALLATCSL HNLLNASLLS
0301: ESGPPLLDFE DLTIVLSTLL PVIGINNERK RFSDISVGRK TYNEVQRCFL TVGLVYPEDL FTFLLNKCKL KEDPLTFGAL CILKHLLPRL FEAWHSKRPL
0401: LVDTASSLLD EQSLAVRKAL SELIVVMASH CYLVGPSGEL FVEYLVRHSA IGESDHLKAK GELVSPTQLR AVCGKGLLLL TVTIPEMEYI LWPFLLKMII
0501: PKVYTGAVAS VCRCITELCR RRSSTTPMLI ECKARADIPN PEELFTRLVV LLHNPLAKEQ LASQILTVLG YLSPLFPKNI SMFWQDEIPK MKAYVYDTED
0601: LKLDPTYQET WDDMIINFLA ESLDVTQDAD WVISLGNSFA KQYILYAPDD DHAALLHRCI GILLQKVNDR AYVRDKIDWM YEQADISIPA NRLGLAKAMG
0701: LVAASHLDTV LEKLKIIVDN VGQSIFQRIL SLFSESYKTE DSDDIHAALA LMYGYAAKYA PSSVIEARID ALVGTNMLSR LLHVRQQTAK QAVITAIDLL
0801: GRAVINAAET GATFPLKRRD QMLDYILTLM GRDENEGFAE SSLEVLHTQA LALNACTTLV SVEPKLTIET RNRVMKATLG FFALPNDPSD VISPLIDNLV
0901: TLLCAILLTS GEDGRSRAEQ LLHLLRQLDQ YVSSPIDYQR KRGCVAVHEM LLKFRKLCVG GYCALGCSGD CPHRKYADRS MQGNFSNLPS VFLFPDREVL
1001: CLGDRVITYL PRCADTNSEV RKISAQILDQ FFSISLSLPK AVLTSGLDSE DSYKALSSLE DVIAILKSDA SIDPSEVFNR IVSSICSLLT EHELVAALHS
1101: CTAAICDKIR QSAEGAIQAV TEFVSRRGSQ LSDNDISRTT HSLLSAAVHI TDKNLRVEAI GAISALAENT QSSIVFNEVL ATAGKDIVTK DITRMRGGWP
1201: MQDAFYAFSQ HTELSVLFME HLISILNRSS LVKSDSHKGE NTSSSSETHV EDDILQAAIF ALTAFFRGGG KIGKKAVEKS YSSVVGALTL QLGSCHGLAS
1301: SGQQDPLRVL LTSFQAFCEC VGDLEMGKIL ARNGEQIEKE KWVGLIGDIA GCISIKRPKE VRHICMILTK ALNRPQRFQR EAAAAALSEF IRYSGDFSSV
1401: MEEMVEALCR HVSDDSPTVR RLCLRGLVQM PSACMSHYTT QVIGVILALL DDLDESVQLT AVSCLLMVTE SASNDAVEPI LLNLSVRLRN LQVSMDPKMR
1501: ANAFSALGAL SKYATGGQRE GFVEQIHSTL PRLVVHLHDD DPSIRQACRV TLKRFAPLVD IINYSTLYDS RAFGSEDRTD YENFVRDLSK HLVQESERVD
1601: TYMASTIQAF DAPWPVIQAN AIHFSTTMLS LSEDQHIISL YYPQVFETLV SKMTRSQDSV VRAACSSAFG LLLRSSKSTL WRGARLDGTD SGRKANDLES
1701: VKK

Arabidopsis Description

SGR6Protein SHOOT GRAVITROPISM 6 [Source:UniProtKB/Swiss-Prot;Acc:F4IP13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.