Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G309500.1 | Wheat | cytosol, plastid | 98.74 | 99.02 |
| TraesCS4B01G311700.1 | Wheat | cytosol, plastid | 97.99 | 98.27 |
| HORVU4Hr1G079420.8 | Barley | plastid | 95.47 | 90.92 |
| KXG40179 | Sorghum | plasma membrane | 86.97 | 87.22 |
| Zm00001d027665_P004 | Maize | plasma membrane | 82.95 | 80.91 |
| GSMUA_Achr1P01290_001 | Banana | peroxisome | 37.66 | 67.91 |
| GSMUA_Achr1P01300_001 | Banana | plastid | 30.14 | 63.25 |
| CDY67451 | Canola | cytosol, peroxisome | 44.49 | 63.06 |
| Solyc09g008490.2.1 | Tomato | extracellular | 61.42 | 61.81 |
| KRG96062 | Soybean | plasma membrane | 60.56 | 61.7 |
| CDY63988 | Canola | cytosol | 57.23 | 61.39 |
| AT2G36810.1 | Thale cress | cytosol | 59.82 | 60.72 |
| Os03t0146600-01 | Rice | plasma membrane | 2.3 | 60.61 |
| Bra017223.1-P | Field mustard | cytosol | 46.1 | 60.1 |
| KRH67779 | Soybean | extracellular | 2.64 | 58.23 |
| VIT_08s0007g04630.t01 | Wine grape | nucleus, plastid | 60.73 | 55.08 |
| CDY57715 | Canola | plasma membrane | 6.31 | 32.64 |
Protein Annotations
| MapMan:35.1 | InterPro:ARM-type_fold | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009606 |
| GO:GO:0009628 | GO:GO:0009630 | GO:GO:0009660 | GO:GO:0009705 | GO:GO:0009959 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016043 | PANTHER:PTHR23120 | PANTHER:PTHR23120:SF0 | SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS4A01G411600 |
| EnsemblPlants:TraesCS4A01G411600.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:683877561..683899104
Molecular Weight (calculated)
192323.0 Da
IEP (calculated)
5.737
GRAVY (calculated)
0.131
Length
1742 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGRDQTAPSK SNCGSIPPLL LAVQVLVASL ADDSPRARDS ALAALREIAP LNPLLVLDCC ATVSRGGHRR FGNMAGVFLV MASAVRALDR RDAEREFLRK
0101: IAKIATAEIV SSKDFNVDWQ RAAATLLVAI GSHDPDLMME EIFLYFSGPT SALPAMLQIL ADFASAEALQ FTPRLKDVLL RVLPILGSVR DGQRPVFANA
0201: LKCWCQAAWV YIGDASSGLP FDDDVMSFMN SVFELLLKVW TGSRDLKVRL SSVEALGEMV GLVTRSQLKS ALPRIIPTML DLCKKDQEVA FTAAHSLHNL
0301: LNASLLSESG PPLLEFEELA VVLITLLPLV SVNISKDERY ISKGLKTYNE LQHCFLVTGL AYPEDLCMFL LSKCRSKDEA SIVGALGTIK HLLPRLLESW
0401: HTKQTLLVEI VKSLLEEQSL GIRMALAELI VVMASHCYLS GHSAELAVEF LVGHSAITDD DLNDINTLKN EYFQDKRFEM KISLAGLSEL RAVCEKGLLL
0501: LAITIPEMEL VLWPFLLQLI IPKKYTGAVA TVCKCITELC RHKLSQTNAL YTEFNASNEM PSPEDLFARL LVLLHNPLSR GQLATQILTV LCYLGQLFPR
0601: NLSLFWEDEV PKMKAYISDP EDLKQDSTYQ EIWDNMIINF LAESLDVVND NVWVISLGDA FARQYDLYAT SDGHSALLHR CLGMLLQKVD DRIYVREKID
0701: LMCRHSSMSI PVNRLGLAQG IGLVAASHLD TVLEKLKNIL ENAGQSALQR FLSFFSFREK VEDVDDTYAA LALMYGYAAR YAPSTVIEAR INALVGTDML
0801: GRFLHVQHPT AKQAVITAID LLGRAVISAA EIGISFPLQR RDQLLEYVLT LMGRDQSDDL VDFSIELLQT QTVALSACTT LVSIEPRLPM ETRNRVMKAT
0901: LGFFALPTEP SNIVESLITN LIILLGAILL TSGEDGRSRA EQLLHILRQL DPYVSASAEH QRRRGCVAVH EVLVKFRNLC SGGFGASGSY PTLSLKHIDQ
1001: GGPRGSSSLP SAFVLPNRDS LSLGERIMAY LPRCADTDDE VRKVAIQIIA LFFNISLSLP KQKTSANDID LESSYGALSS LEDIVSIIRR ASVDQIEVFH
1101: RVVSSVCILL SKDELVVLLH SCTLAACDKV KQSADGSIQA IIVFIIRRGK DLREADVLRT TQSLLSSAIA LTDKHSRQEV LNAISCLAEN TNHIVVFDEV
1201: LFVAGRDICT KDITRIRGGW AIQDVFYVFS QHKVLATLFL EYILSILHKE PVATNDSEKG EINSESSADD CILQATMFAL NAFLRGGGKV GKQAVEQSYP
1301: SVLSALILKL GGLHGLAELG RNELLRSLLI AFQSFCDCVG DVEMGKILAR DGERTEKEKW IDLVQEVACS SSVKRPNEVL PTCVILSKSL DRNQRAEREA
1401: AAAALSEFIR HSEKEPALLE QMVEELCQHV TDDSPTVRSL CLRGLVQIPE SHILNYIQQV LGVILALLED ATESVQLTAV QCLLTVLNVS EQDAVDPILI
1501: SLLVRLRNLQ ISMNTKMRSN AFAAYGALSA YGAGSQHHAF LEQIHATLPR LILHLHDNDL SVRLACRNTF QLLAPLMEVD GLSSLLNKQY FTSDRRSDYE
1601: DFIRDLTRQL CRLSPVRVDS YLESAIQAFD APWPVIQANA VCLVSCMLSF LDDQRFLAPY FSQVFAMLVG RISQSPEAVV RAAASSALGL LIKRSNMLKS
1701: LSSRFDRTDP SQSSQHGEPH AKTSSELQEE AAAKPNGAQG EQ
0101: IAKIATAEIV SSKDFNVDWQ RAAATLLVAI GSHDPDLMME EIFLYFSGPT SALPAMLQIL ADFASAEALQ FTPRLKDVLL RVLPILGSVR DGQRPVFANA
0201: LKCWCQAAWV YIGDASSGLP FDDDVMSFMN SVFELLLKVW TGSRDLKVRL SSVEALGEMV GLVTRSQLKS ALPRIIPTML DLCKKDQEVA FTAAHSLHNL
0301: LNASLLSESG PPLLEFEELA VVLITLLPLV SVNISKDERY ISKGLKTYNE LQHCFLVTGL AYPEDLCMFL LSKCRSKDEA SIVGALGTIK HLLPRLLESW
0401: HTKQTLLVEI VKSLLEEQSL GIRMALAELI VVMASHCYLS GHSAELAVEF LVGHSAITDD DLNDINTLKN EYFQDKRFEM KISLAGLSEL RAVCEKGLLL
0501: LAITIPEMEL VLWPFLLQLI IPKKYTGAVA TVCKCITELC RHKLSQTNAL YTEFNASNEM PSPEDLFARL LVLLHNPLSR GQLATQILTV LCYLGQLFPR
0601: NLSLFWEDEV PKMKAYISDP EDLKQDSTYQ EIWDNMIINF LAESLDVVND NVWVISLGDA FARQYDLYAT SDGHSALLHR CLGMLLQKVD DRIYVREKID
0701: LMCRHSSMSI PVNRLGLAQG IGLVAASHLD TVLEKLKNIL ENAGQSALQR FLSFFSFREK VEDVDDTYAA LALMYGYAAR YAPSTVIEAR INALVGTDML
0801: GRFLHVQHPT AKQAVITAID LLGRAVISAA EIGISFPLQR RDQLLEYVLT LMGRDQSDDL VDFSIELLQT QTVALSACTT LVSIEPRLPM ETRNRVMKAT
0901: LGFFALPTEP SNIVESLITN LIILLGAILL TSGEDGRSRA EQLLHILRQL DPYVSASAEH QRRRGCVAVH EVLVKFRNLC SGGFGASGSY PTLSLKHIDQ
1001: GGPRGSSSLP SAFVLPNRDS LSLGERIMAY LPRCADTDDE VRKVAIQIIA LFFNISLSLP KQKTSANDID LESSYGALSS LEDIVSIIRR ASVDQIEVFH
1101: RVVSSVCILL SKDELVVLLH SCTLAACDKV KQSADGSIQA IIVFIIRRGK DLREADVLRT TQSLLSSAIA LTDKHSRQEV LNAISCLAEN TNHIVVFDEV
1201: LFVAGRDICT KDITRIRGGW AIQDVFYVFS QHKVLATLFL EYILSILHKE PVATNDSEKG EINSESSADD CILQATMFAL NAFLRGGGKV GKQAVEQSYP
1301: SVLSALILKL GGLHGLAELG RNELLRSLLI AFQSFCDCVG DVEMGKILAR DGERTEKEKW IDLVQEVACS SSVKRPNEVL PTCVILSKSL DRNQRAEREA
1401: AAAALSEFIR HSEKEPALLE QMVEELCQHV TDDSPTVRSL CLRGLVQIPE SHILNYIQQV LGVILALLED ATESVQLTAV QCLLTVLNVS EQDAVDPILI
1501: SLLVRLRNLQ ISMNTKMRSN AFAAYGALSA YGAGSQHHAF LEQIHATLPR LILHLHDNDL SVRLACRNTF QLLAPLMEVD GLSSLLNKQY FTSDRRSDYE
1601: DFIRDLTRQL CRLSPVRVDS YLESAIQAFD APWPVIQANA VCLVSCMLSF LDDQRFLAPY FSQVFAMLVG RISQSPEAVV RAAASSALGL LIKRSNMLKS
1701: LSSRFDRTDP SQSSQHGEPH AKTSSELQEE AAAKPNGAQG EQ
0001: MASSSLGSSI PAPEAVQLLV SSLADDSSVV REASMASLRD IASLNPLLVL DCCYAVSRGG RRRFGNMAGV FQVMAFSVGA LEKGESDSVF MGKLAKIATA
0101: EIISSKELNA DWQRQASGLL VSIGTHFPDL MMEEIFLHLS GPATAAPAMV QILADFASSD ALQFTPRLKG VLSKVSPILG NVRDIHRPIF ANAFKCWSQA
0201: VWLYITDLTS DSPLDSDVMS FLNSVFELLL RVWAVSRDHK VRVSTVDALG QMVGLITRTQ LKSALPRLIP AILELYKKDH DDALLATCSL HNLLNASLLS
0301: ESGPPLLDFE DLTIVLSTLL PVIGINNERK RFSDISVGRK TYNEVQRCFL TVGLVYPEDL FTFLLNKCKL KEDPLTFGAL CILKHLLPRL FEAWHSKRPL
0401: LVDTASSLLD EQSLAVRKAL SELIVVMASH CYLVGPSGEL FVEYLVRHSA IGESDHLKAK GELVSPTQLR AVCGKGLLLL TVTIPEMEYI LWPFLLKMII
0501: PKVYTGAVAS VCRCITELCR RRSSTTPMLI ECKARADIPN PEELFTRLVV LLHNPLAKEQ LASQILTVLG YLSPLFPKNI SMFWQDEIPK MKAYVYDTED
0601: LKLDPTYQET WDDMIINFLA ESLDVTQDAD WVISLGNSFA KQYILYAPDD DHAALLHRCI GILLQKVNDR AYVRDKIDWM YEQADISIPA NRLGLAKAMG
0701: LVAASHLDTV LEKLKIIVDN VGQSIFQRIL SLFSESYKTE DSDDIHAALA LMYGYAAKYA PSSVIEARID ALVGTNMLSR LLHVRQQTAK QAVITAIDLL
0801: GRAVINAAET GATFPLKRRD QMLDYILTLM GRDENEGFAE SSLEVLHTQA LALNACTTLV SVEPKLTIET RNRVMKATLG FFALPNDPSD VISPLIDNLV
0901: TLLCAILLTS GEDGRSRAEQ LLHLLRQLDQ YVSSPIDYQR KRGCVAVHEM LLKFRKLCVG GYCALGCSGD CPHRKYADRS MQGNFSNLPS VFLFPDREVL
1001: CLGDRVITYL PRCADTNSEV RKISAQILDQ FFSISLSLPK AVLTSGLDSE DSYKALSSLE DVIAILKSDA SIDPSEVFNR IVSSICSLLT EHELVAALHS
1101: CTAAICDKIR QSAEGAIQAV TEFVSRRGSQ LSDNDISRTT HSLLSAAVHI TDKNLRVEAI GAISALAENT QSSIVFNEVL ATAGKDIVTK DITRMRGGWP
1201: MQDAFYAFSQ HTELSVLFME HLISILNRSS LVKSDSHKGE NTSSSSETHV EDDILQAAIF ALTAFFRGGG KIGKKAVEKS YSSVVGALTL QLGSCHGLAS
1301: SGQQDPLRVL LTSFQAFCEC VGDLEMGKIL ARNGEQIEKE KWVGLIGDIA GCISIKRPKE VRHICMILTK ALNRPQRFQR EAAAAALSEF IRYSGDFSSV
1401: MEEMVEALCR HVSDDSPTVR RLCLRGLVQM PSACMSHYTT QVIGVILALL DDLDESVQLT AVSCLLMVTE SASNDAVEPI LLNLSVRLRN LQVSMDPKMR
1501: ANAFSALGAL SKYATGGQRE GFVEQIHSTL PRLVVHLHDD DPSIRQACRV TLKRFAPLVD IINYSTLYDS RAFGSEDRTD YENFVRDLSK HLVQESERVD
1601: TYMASTIQAF DAPWPVIQAN AIHFSTTMLS LSEDQHIISL YYPQVFETLV SKMTRSQDSV VRAACSSAFG LLLRSSKSTL WRGARLDGTD SGRKANDLES
1701: VKK
0101: EIISSKELNA DWQRQASGLL VSIGTHFPDL MMEEIFLHLS GPATAAPAMV QILADFASSD ALQFTPRLKG VLSKVSPILG NVRDIHRPIF ANAFKCWSQA
0201: VWLYITDLTS DSPLDSDVMS FLNSVFELLL RVWAVSRDHK VRVSTVDALG QMVGLITRTQ LKSALPRLIP AILELYKKDH DDALLATCSL HNLLNASLLS
0301: ESGPPLLDFE DLTIVLSTLL PVIGINNERK RFSDISVGRK TYNEVQRCFL TVGLVYPEDL FTFLLNKCKL KEDPLTFGAL CILKHLLPRL FEAWHSKRPL
0401: LVDTASSLLD EQSLAVRKAL SELIVVMASH CYLVGPSGEL FVEYLVRHSA IGESDHLKAK GELVSPTQLR AVCGKGLLLL TVTIPEMEYI LWPFLLKMII
0501: PKVYTGAVAS VCRCITELCR RRSSTTPMLI ECKARADIPN PEELFTRLVV LLHNPLAKEQ LASQILTVLG YLSPLFPKNI SMFWQDEIPK MKAYVYDTED
0601: LKLDPTYQET WDDMIINFLA ESLDVTQDAD WVISLGNSFA KQYILYAPDD DHAALLHRCI GILLQKVNDR AYVRDKIDWM YEQADISIPA NRLGLAKAMG
0701: LVAASHLDTV LEKLKIIVDN VGQSIFQRIL SLFSESYKTE DSDDIHAALA LMYGYAAKYA PSSVIEARID ALVGTNMLSR LLHVRQQTAK QAVITAIDLL
0801: GRAVINAAET GATFPLKRRD QMLDYILTLM GRDENEGFAE SSLEVLHTQA LALNACTTLV SVEPKLTIET RNRVMKATLG FFALPNDPSD VISPLIDNLV
0901: TLLCAILLTS GEDGRSRAEQ LLHLLRQLDQ YVSSPIDYQR KRGCVAVHEM LLKFRKLCVG GYCALGCSGD CPHRKYADRS MQGNFSNLPS VFLFPDREVL
1001: CLGDRVITYL PRCADTNSEV RKISAQILDQ FFSISLSLPK AVLTSGLDSE DSYKALSSLE DVIAILKSDA SIDPSEVFNR IVSSICSLLT EHELVAALHS
1101: CTAAICDKIR QSAEGAIQAV TEFVSRRGSQ LSDNDISRTT HSLLSAAVHI TDKNLRVEAI GAISALAENT QSSIVFNEVL ATAGKDIVTK DITRMRGGWP
1201: MQDAFYAFSQ HTELSVLFME HLISILNRSS LVKSDSHKGE NTSSSSETHV EDDILQAAIF ALTAFFRGGG KIGKKAVEKS YSSVVGALTL QLGSCHGLAS
1301: SGQQDPLRVL LTSFQAFCEC VGDLEMGKIL ARNGEQIEKE KWVGLIGDIA GCISIKRPKE VRHICMILTK ALNRPQRFQR EAAAAALSEF IRYSGDFSSV
1401: MEEMVEALCR HVSDDSPTVR RLCLRGLVQM PSACMSHYTT QVIGVILALL DDLDESVQLT AVSCLLMVTE SASNDAVEPI LLNLSVRLRN LQVSMDPKMR
1501: ANAFSALGAL SKYATGGQRE GFVEQIHSTL PRLVVHLHDD DPSIRQACRV TLKRFAPLVD IINYSTLYDS RAFGSEDRTD YENFVRDLSK HLVQESERVD
1601: TYMASTIQAF DAPWPVIQAN AIHFSTTMLS LSEDQHIISL YYPQVFETLV SKMTRSQDSV VRAACSSAFG LLLRSSKSTL WRGARLDGTD SGRKANDLES
1701: VKK
Arabidopsis Description
SGR6Protein SHOOT GRAVITROPISM 6 [Source:UniProtKB/Swiss-Prot;Acc:F4IP13]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.