Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P01300_001 | Banana | plastid | 35.61 | 14.46 |
| CDY63988 | Canola | cytosol | 48.37 | 10.04 |
| KRH67779 | Soybean | extracellular | 2.08 | 8.86 |
| KRG96062 | Soybean | plasma membrane | 39.17 | 7.72 |
| Solyc09g008490.2.1 | Tomato | extracellular | 37.09 | 7.22 |
| VIT_08s0007g04630.t01 | Wine grape | nucleus, plastid | 37.98 | 6.66 |
| KXG40179 | Sorghum | plasma membrane | 33.83 | 6.56 |
| TraesCS4B01G311700.1 | Wheat | cytosol, plastid | 32.64 | 6.33 |
| TraesCS4D01G309500.1 | Wheat | cytosol, plastid | 32.64 | 6.33 |
| TraesCS4A01G411600.1 | Wheat | plasma membrane | 32.64 | 6.31 |
| Zm00001d027665_P004 | Maize | plasma membrane | 33.23 | 6.27 |
| HORVU4Hr1G079420.8 | Barley | plastid | 32.34 | 5.96 |
| HORVU3Hr1G069360.1 | Barley | extracellular | 0.89 | 4.76 |
| Zm00001d048436_P001 | Maize | cytosol | 4.75 | 4.71 |
| Os03t0146600-01 | Rice | plasma membrane | 0.59 | 3.03 |
| CDY67451 | Canola | cytosol, peroxisome | 2.97 | 0.81 |
| GSMUA_Achr1P01290_001 | Banana | peroxisome | 2.08 | 0.72 |
Protein Annotations
| EnsemblPlants:CDY57715 | EnsemblPlantsGene:GSBRNA2T00022562001 | Gene3D:1.25.10.10 | GO:A0A078J4M7 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Cnd1_C |
| InterPro:IPR011989 | PANTHER:PTHR23120 | PANTHER:PTHR23120:SF0 | PFAM:PF12717 | ProteinID:CDY57715 | ProteinID:CDY57715.1 |
| SUPFAM:SSF48371 | TMHMM:TMhelix | UniParc:UPI0004EAB28F | UniProt:A0A078J4M7 | MapMan:35.1 | : |
Description
BnaC04g51880DBnaC04g51880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4M7]
Coordinates
chrLK033598:+:20105..22285
Molecular Weight (calculated)
37928.2 Da
IEP (calculated)
5.016
GRAVY (calculated)
0.122
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSKEKRKSG LILLEILLDA FQLRDQRRYL AICTLTVNLS VYVLVLQVQH ICIILTKALN RPQRFQREAA AAALSEFIRY SGDFSSVMEE MVEALCRHVS
101: DDSPTVRRLC LRGLVQMAFA CMNHYTTQVI GVILALLDDL DESVQLTAVS CLLMVTETAS NDAVEPILLN LSVRLRNLQI SIDPKMRASA FSAFKNGEGL
201: DLIGPTQVEN PMIPSLLRNN TVYCGLCENQ PVTANEIWGF AIYINRDSVQ RETWQALDLW ASVPLLLIVV FEASAYELRE EEKIGVLVDE EGVKKAVKEF
301: LGERDGESES RRAKELWSVS SHLFPLRVVL FIQKSCE
101: DDSPTVRRLC LRGLVQMAFA CMNHYTTQVI GVILALLDDL DESVQLTAVS CLLMVTETAS NDAVEPILLN LSVRLRNLQI SIDPKMRASA FSAFKNGEGL
201: DLIGPTQVEN PMIPSLLRNN TVYCGLCENQ PVTANEIWGF AIYINRDSVQ RETWQALDLW ASVPLLLIVV FEASAYELRE EEKIGVLVDE EGVKKAVKEF
301: LGERDGESES RRAKELWSVS SHLFPLRVVL FIQKSCE
0001: MSFLNSVFEL LLRVWAVSRD HKVRVSTVDA LGQMVGLITR TQLKSALPRL IPAILELYKK DHDDALLATC SLHNLLNASL LSESGPPLLD FEDLTIVLST
0101: LLPVIGINNE RKRFSDISVG RKTYNEVQRC FLTVGLVYPE DLFTFLLNKC KLKEDPLTFG ALCILKHLLP RLFEAWHSKR PLLVDTASSL LDEQSLAVRK
0201: ALSELIVVMA SHCYLVGPSG ELFVEYLVRH SAIGESDHLK AKGELVSPTQ LRAVCGKGLL LLTVTIPEME YILWPFLLKM IIPKVYTGAV ASVCRCITEL
0301: CRRRSSTTPM LIECKARADI PNPEELFTRL VVLLHNPLAK EQLASQILTV LGYLSPLFPK NISMFWQDEI PKMKAYVYDT EDLKLDPTYQ ETWDDMIINF
0401: LAESLDVTQD ADWVISLGNS FAKQYILYAP DDDHAALLHR CIGILLQKVN DRAYVRDKID WMYEQADISI PANRLGLAKA MGLVAASHLD TVLEKLKIIV
0501: DNVGQSIFQR ILSLFSESYK TEDSDDIHAA LALMYGYAAK YAPSSVIEAR IDALVGTNML SRLLHVRQQT AKQAVITAID LLGRAVINAA ETGATFPLKR
0601: RDQMLDYILT LMGRDENEGF AESSLEVLHT QALALNACTT LVSVEPKLTI ETRNRVMKAT LGFFALPNDP SDVISPLIDN LVTLLCAILL TSGEDGRSRA
0701: EQLLHLLRQL DQYVSSPIDY QRKRGCVAVH EMLLKFRKLC VGGYCALGCS GDCPHRKYAD RSMQGNFSNL PSVFLFPDRE VLCLGDRVIT YLPRCADTNS
0801: EVRKISAQIL DQFFSISLSL PKAVLTSGLD SEDSYKALSS LEDVIAILKS DASIDPSEVF NRIVSSICSL LTEHELVAAL HSCTAAICDK IRQSAEGAIQ
0901: AVTEFVSRRG SQLSDNDISR TTHSLLSAAV HITDKNLRVE AIGAISALAE NTQSSIVFNE VLATAGKDIV TKDITRMRGG WPMQDAFYAF SQHTELSVLF
1001: MEHLISILNR SSLVKSDSHK GENTSSSSET HVEDDILQAA IFALTAFFRG GGKIGKKAVE KSYSSVVGAL TLQLGSCHGL ASSGQQDPLR VLLTSFQAFC
1101: ECVGDLEMGK ILARNGEQIE KEKWVGLIGD IAGCISIKRP KEVRHICMIL TKALNRPQRF QREAAAAALS EFIRYSGDFS SVMEEMVEAL CRHVSDDSPT
1201: VRRLCLRGLV QMPSACMSHY TTQVIGVILA LLDDLDESVQ LTAVSCLLMV TESASNDAVE PILLNLSVRL RNLQVSMDPK MRANAFSALG ALSKYATGGQ
1301: REGFVEQIHS TLPRLVVHLH DDDPSIRQAC RVTLKRFAPL VDIINYSTLY DSRAFGSEDR TDYENFVRDL SKHLVQESER VDTYMASTIQ AFDAPWPVIQ
1401: ANAIHFSTTM LSLSEDQHII SLYYPQVFET LVSKMTRSQD SVVRAACSSA FGLLLRSSKS TLWRGARLDG TDSGRKANDL ESVKK
0101: LLPVIGINNE RKRFSDISVG RKTYNEVQRC FLTVGLVYPE DLFTFLLNKC KLKEDPLTFG ALCILKHLLP RLFEAWHSKR PLLVDTASSL LDEQSLAVRK
0201: ALSELIVVMA SHCYLVGPSG ELFVEYLVRH SAIGESDHLK AKGELVSPTQ LRAVCGKGLL LLTVTIPEME YILWPFLLKM IIPKVYTGAV ASVCRCITEL
0301: CRRRSSTTPM LIECKARADI PNPEELFTRL VVLLHNPLAK EQLASQILTV LGYLSPLFPK NISMFWQDEI PKMKAYVYDT EDLKLDPTYQ ETWDDMIINF
0401: LAESLDVTQD ADWVISLGNS FAKQYILYAP DDDHAALLHR CIGILLQKVN DRAYVRDKID WMYEQADISI PANRLGLAKA MGLVAASHLD TVLEKLKIIV
0501: DNVGQSIFQR ILSLFSESYK TEDSDDIHAA LALMYGYAAK YAPSSVIEAR IDALVGTNML SRLLHVRQQT AKQAVITAID LLGRAVINAA ETGATFPLKR
0601: RDQMLDYILT LMGRDENEGF AESSLEVLHT QALALNACTT LVSVEPKLTI ETRNRVMKAT LGFFALPNDP SDVISPLIDN LVTLLCAILL TSGEDGRSRA
0701: EQLLHLLRQL DQYVSSPIDY QRKRGCVAVH EMLLKFRKLC VGGYCALGCS GDCPHRKYAD RSMQGNFSNL PSVFLFPDRE VLCLGDRVIT YLPRCADTNS
0801: EVRKISAQIL DQFFSISLSL PKAVLTSGLD SEDSYKALSS LEDVIAILKS DASIDPSEVF NRIVSSICSL LTEHELVAAL HSCTAAICDK IRQSAEGAIQ
0901: AVTEFVSRRG SQLSDNDISR TTHSLLSAAV HITDKNLRVE AIGAISALAE NTQSSIVFNE VLATAGKDIV TKDITRMRGG WPMQDAFYAF SQHTELSVLF
1001: MEHLISILNR SSLVKSDSHK GENTSSSSET HVEDDILQAA IFALTAFFRG GGKIGKKAVE KSYSSVVGAL TLQLGSCHGL ASSGQQDPLR VLLTSFQAFC
1101: ECVGDLEMGK ILARNGEQIE KEKWVGLIGD IAGCISIKRP KEVRHICMIL TKALNRPQRF QREAAAAALS EFIRYSGDFS SVMEEMVEAL CRHVSDDSPT
1201: VRRLCLRGLV QMPSACMSHY TTQVIGVILA LLDDLDESVQ LTAVSCLLMV TESASNDAVE PILLNLSVRL RNLQVSMDPK MRANAFSALG ALSKYATGGQ
1301: REGFVEQIHS TLPRLVVHLH DDDPSIRQAC RVTLKRFAPL VDIINYSTLY DSRAFGSEDR TDYENFVRDL SKHLVQESER VDTYMASTIQ AFDAPWPVIQ
1401: ANAIHFSTTM LSLSEDQHII SLYYPQVFET LVSKMTRSQD SVVRAACSSA FGLLLRSSKS TLWRGARLDG TDSGRKANDL ESVKK
Arabidopsis Description
SGR6Protein SHOOT GRAVITROPISM 6 [Source:UniProtKB/Swiss-Prot;Acc:F4IP13]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.