Factsheet for GSMUA_Achr1P01300_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plasma membrane 2
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67779	Soybean	extracellular	5.54	58.23
HORVU3Hr1G069360.1	Barley	extracellular	4.34	57.14
Zm00001d048436_P001	Maize	cytosol	14.7	35.88
CDY57715	Canola	plasma membrane	14.46	35.61
Bra017223.1-P	Field mustard	cytosol	56.87	35.33
CDY63988	Canola	cytosol	60.72	31.03
TraesCS4D01G309500.1	Wheat	cytosol, plastid	63.37	30.28
TraesCS4A01G411600.1	Wheat	plasma membrane	63.25	30.14
TraesCS4B01G311700.1	Wheat	cytosol, plastid	63.01	30.11
KXG40179	Sorghum	plasma membrane	62.41	29.82
AT2G36810.1	Thale cress	cytosol	60.84	29.43
KRG96062	Soybean	plasma membrane	60.36	29.3
Solyc09g008490.2.1	Tomato	extracellular	59.76	28.65
HORVU4Hr1G079420.8	Barley	plastid	63.01	28.59
VIT_08s0007g04630.t01	Wine grape	nucleus, plastid	64.46	27.85
Zm00001d027665_P004	Maize	plasma membrane	57.59	26.76
Os03t0146600-01	Rice	plasma membrane	2.05	25.76
CDY67451	Canola	cytosol, peroxisome	32.17	21.73
GSMUA_Achr1P01290_001	Banana	peroxisome	0.36	0.31

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0003674	GO:GO:0005215
GO:GO:0005319	GO:GO:0005488	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150	EnsemblPlantsGene:GSMUA_Achr1G01300_001
EnsemblPlants:GSMUA_Achr1P01300_001	EnsemblPlants:GSMUA_Achr1T01300_001	InterPro:HEAT_type_2	InterPro:IPR011989	InterPro:IPR021133	UniProt:M0RW38
PFscan:PS50077	PANTHER:PTHR23120	PANTHER:PTHR23120:SF0	SUPFAM:SSF48371	UniParc:UPI000295B483	SEG:seg

Description

HEAT repeat family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G01300_001]

Coordinates

chr1:+:1006227..1022774

Molecular Weight (calculated)

91621.5 Da

IEP (calculated)

6.577

GRAVY (calculated)

0.113

Length

830 amino acids

Sequence
(BLAST)

001: MFSLITSVIS VMLPFGEDGR SRAEQLLHIL RQVDLYVSSS VEHQRRRGCV AVYELLLKFR ALFSGGVCGL GCHSSCMHSK QIDRVAQRNF SNLPSAFVLP
101: SRDSLSLGER VIAYLPRCAD TSSEVRKLAA QIIGQFFSVA LSLPKLAASV SYIDIEVSYS ALSSLEDVIS ILRRDASIDQ SETFNRVISS VCVLLTRDEL
201: IISLHTCTSA ICDKIKQSAD GAIQAVIEFI SKRGNELLEA DISRTTQSLL SATIAITDKH TRQEVLNAIS CLAENTNSSI VFNEILAAAG RDIVTKDVTR
301: IRGGWPMQDA FFAFSQHPVL SFSFLEYVVS VLDRTPLPKT DVDKGEIVAH SVEFQNDNQI QQAAILAITA FFRGGGKIGK KAVEQSYSTV LSALTLQLGS
401: CHGLASLGQL EPLRLLLLAF QSFCDCVGDI EMGKILARDG EHKDQEKLID LIQEIASCTS MKRPKEVIKF LHDKLFNYVA DMVCSTGPYR PVSPISMILS
501: KALNRHQRFQ REAAASALSE FIRHSDGLPS LLEHIVEAMC LHVSDESPTV RSLCLRGLVQ IPKSHMPNYI AQVLGVIVAL LEDPDESVQL TAVQCLLSVL
601: SSSSEEAVDP ILINLSVRLR NLQISMNEKM RSNAFAAYGA LSNFGMGSQH QAFLEQVHAT IPRLILHLHD DDLNVRQACR NTLRQLAPLI EADGFSALFN
701: KQVFSSERRS DYEDFIRDLS RHVYQLLASR VDSYLAPLIQ AFDSPWPVIQ ANAIYFSSCL LSLSEDQRSL APYCLQVFAA LVTRMNRSPD AVVRASCSFA
801: LGLLLKAFNP LAHTVLQIDQ TDSGRSNITE

Best Arabidopsis Sequence Match ( AT2G36810.1 )
(BLAST)

0001: MASSSLGSSI PAPEAVQLLV SSLADDSSVV REASMASLRD IASLNPLLVL DCCYAVSRGG RRRFGNMAGV FQVMAFSVGA LEKGESDSVF MGKLAKIATA
0101: EIISSKELNA DWQRQASGLL VSIGTHFPDL MMEEIFLHLS GPATAAPAMV QILADFASSD ALQFTPRLKG VLSKVSPILG NVRDIHRPIF ANAFKCWSQA
0201: VWLYITDLTS DSPLDSDVMS FLNSVFELLL RVWAVSRDHK VRVSTVDALG QMVGLITRTQ LKSALPRLIP AILELYKKDH DDALLATCSL HNLLNASLLS
0301: ESGPPLLDFE DLTIVLSTLL PVIGINNERK RFSDISVGRK TYNEVQRCFL TVGLVYPEDL FTFLLNKCKL KEDPLTFGAL CILKHLLPRL FEAWHSKRPL
0401: LVDTASSLLD EQSLAVRKAL SELIVVMASH CYLVGPSGEL FVEYLVRHSA IGESDHLKAK GELVSPTQLR AVCGKGLLLL TVTIPEMELS DFNAKEYMKL
0501: QYILWPFLLK MIIPKVYTGA VASVCRCITE LCRRRSSTTP MLIECKARAD IPNPEELFTR LVVLLHNPLA KEQLASQILT VLGYLSPLFP KNISMFWQDE
0601: IPKMKAYVYD TEDLKLDPTY QETWDDMIIN FLAESLDVTQ DADWVISLGN SFAKQYILYA PDDDHAALLH RCIGILLQKV NDRAYVRDKI DWMYEQADIS
0701: IPANRLGLAK AMGLVAASHL DTVLEKLKII VDNVGQSIFQ RILSLFSESY KTEDSDDIHA ALALMYGYAA KYAPSSVIEA RIDALVGTNM LSRLLHVRQQ
0801: TAKQAVITAI DLLGRAVINA AETGATFPLK RRDQMLDYIL TLMGRDENEG FAESSLEVLH TQALALNACT TLVSVEPKLT IETRNRVMKA TLGFFALPND
0901: PSDVISPLID NLVTLLCAIL LTSGEDGRSR AEQLLHLLRQ LDQYVSSPID YQRKRGCVAV HEMLLKFRKL CVGGYCALGC SGDCPHRKYA DRSMQGNFSN
1001: LPSVFLFPDR EVLCLGDRVI TYLPRCADTN SEVRKISAQI LDQFFSISLS LPKAVLTSGL DSEDSYKALS SLEDVIAILK SDASIDPSEV FNRIVSSICS
1101: LLTEHELVAA LHSCTAAICD KIRQSAEGAI QAVTEFVSRR GSQLSDNDIS RTTHSLLSAA VHITDKNLRV EAIGAISALA ENTQSSIVFN EVLATAGKDI
1201: VTKDITRMRG GWPMQDAFYA FSQHTELSVL FMEHLISILN RSSLVKSDSH KGENTSSSSE THVEDDILQA AIFALTAFFR GGGKIGKKAV EKSYSSVVGA
1301: LTLQLGSCHG LASSGQQDPL RVLLTSFQAF CECVGDLEMG KILARNGEQI EKEKWVGLIG DIAGCISIKR PKEVRHICMI LTKALNRPQR FQREAAAAAL
1401: SEFIRYSGDF SSVMEEMVEA LCRHVSDDSP TVRRLCLRGL VQMPSACMSH YTTQVIGVIL ALLDDLDESV QLTAVSCLLM VTESASNDAV EPILLNLSVR
1501: LRNLQVSMDP KMRANAFSAL GALSKYATGG QREGFVEQIH STLPRLVVHL HDDDPSIRQA CRVTLKRFAP LVDIINYSTL YDSRAFGSED RTDYENFVRD
1601: LSKHLVQESE RVDTYMASTI QAFDAPWPVI QANAIHFSTT MLSLSEDQHI ISLYYPQVFE TLVSKMTRSQ DSVVRAACSS AFGLLLRSSK STLWRGARLD
1701: GTDSGRKAND LESVKK

Arabidopsis Description

SGR6Protein SHOOT GRAVITROPISM 6 [Source:UniProtKB/Swiss-Prot;Acc:F4IP13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.