Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67451 | Canola | cytosol, peroxisome | 75.0 | 99.11 |
| Bra017223.1-P | Field mustard | cytosol | 80.73 | 98.13 |
| AT2G36810.1 | Thale cress | cytosol | 92.8 | 87.82 |
| Solyc09g008490.2.1 | Tomato | extracellular | 70.94 | 66.55 |
| VIT_08s0007g04630.t01 | Wine grape | nucleus, plastid | 72.11 | 60.96 |
| GSMUA_Achr1P01300_001 | Banana | plastid | 31.03 | 60.72 |
| GSMUA_Achr1P01290_001 | Banana | peroxisome | 36.08 | 60.66 |
| KXG40179 | Sorghum | plasma membrane | 62.13 | 58.09 |
| TraesCS4B01G311700.1 | Wheat | cytosol, plastid | 61.76 | 57.74 |
| TraesCS4D01G309500.1 | Wheat | cytosol, plastid | 61.64 | 57.63 |
| TraesCS4A01G411600.1 | Wheat | plasma membrane | 61.39 | 57.23 |
| HORVU4Hr1G079420.8 | Barley | plastid | 61.82 | 54.89 |
| Zm00001d027665_P004 | Maize | plasma membrane | 59.42 | 54.03 |
| CDY57715 | Canola | plasma membrane | 10.04 | 48.37 |
| HORVU3Hr1G069360.1 | Barley | extracellular | 1.66 | 42.86 |
| Zm00001d048436_P001 | Maize | cytosol | 7.7 | 36.76 |
| Os03t0146600-01 | Rice | plasma membrane | 0.99 | 24.24 |
Protein Annotations
| EnsemblPlants:CDY63988 | EnsemblPlantsGene:GSBRNA2T00040773001 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005488 | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:IPR011989 | ncoils:Coil | PANTHER:PTHR23120 | PANTHER:PTHR23120:SF0 | ProteinID:CDY63988 |
| ProteinID:CDY63988.1 | SEG:seg | SUPFAM:SSF48371 | UniParc:UPI0004EF40C2 | UniProt:A0A078JF28 | MapMan:35.1 |
Description
BnaA04g21100DBnaA04g21100D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JF28]
Coordinates
chrLK034381:-:19195..31774
Molecular Weight (calculated)
179985.0 Da
IEP (calculated)
6.319
GRAVY (calculated)
0.016
Length
1624 amino acids
Sequence
(BLAST)
(BLAST)
0001: GESDEAFMGK LAKIATAEII SSKELNADWQ RQASGLLVSI GTHFPDLMME ELFLHLSGPA SASPAMVQIL ADFASSDALQ FTPRLKDVLS RVLPILGNVR
0101: DVHRPIFANA FKCWSQAVWL YITDLTSDSP LDSDVMSFLN SVFELLLRVW TTSRDHKVRV STVEALGQMV GLITRTQLKS ALPRLIPAIL ELYKKDHDDA
0201: LLATCSLYNL LNASLLSESG PPLLEFEDLT IVLSTLLPVI SINSENKRHS GSSVGRKAYN EVQRCFLTVG LVYPEDLFTF LLNKCKLKED HLTFGALCVL
0301: KHLLPRLLEA WHSKRPLLIE AARSLLDEQS LAVRKALSEL IVVMASHCYL VGPSGELFVE YLVRHSAIGE IDNLKAKGEP ISPTQLRAVC GKGLLLLTVT
0401: IPEMEYILWP FLLKMIVPKV YTGAVATVCR CISELCRRRS STTPMLIECK ARADIPSPEE LFTRLVVLLH NPLAKEQLAT QILTVLNYLS PLFPKNISMF
0501: WQDEIPKMKA YVFDTEDLKL DPSYQENWDD MIINFLAESL DVTHDADWVI SLGNAFAKQY NLYTPDDDHA ALLHRCMGIL LQKVNDRAYV RDKIDWMYEQ
0601: ADISIPANRL GLAKAMGLVA ASHLDTVLEK LKVILDNVGQ SIFQRILSLF SESYKTEDSD DIHAALALMY GYAAKYAPSS VIEARIDALV GTNMLSRLLH
0701: VRQQTAKQAV ITAIDLLGRA VINASESGAT FPLKRRDMML DYVLTLMGRD ENEGFAESSL ELLHTQALAL NACTTLVSVE PKLTVETRNR VMKATLGFFA
0801: LPNDPSDVIG PLIDNLVSLL CAILLTSGED GRSRAEQLLH LLRQLDQYVS SPVDYQRKRG CMAVHEMLLK FRKLCVAGYC ALGCSGDCPH RKYVDRSMQG
0901: NFSTLPSVFL FPDREVLCLG DRVITYLPRC ADTNSEVRKI SAQILDQFFS ISLSLPKAAL SSGLDSEKSY KALSSLEDVI AILKSDASID PSEVFNRIVS
1001: SICALLTVDE LVAALHSCTP AICDKIRQSA EGAIQAVTEF VSRRGSQLND NDISRTTQSL LSAAVHITEK SLRVEAIGAI SALAENTQSS IVFSEVLATA
1101: GKDIVTKDIT RMRGGWPMQD AFYAFSQHTE LSVSFMEHLI SVLNRSSLVK ADSHKDSHKG DNTSSSSETH VEDELLQAAI FALTAFFRGG GKTGKKAVEK
1201: SYSSVVGALT LQLGSCHGLA SAGQQDPLRV LLTSFQAFCE CVGDLEMGKI LARSGEQREK EKWVDLIGDI AGCISIKRPK EVQHICIILT KALNRPQRFQ
1301: REAAAAALSE FIRYSGDFSS VMEEMVEALC RHVSDDSPTV RRLCLRGLVQ MPSACMNHYT TQVIGVILAL LDDLDESVQL TAVSCLLMVT ESASNDAVEP
1401: ILLNLSVRLR NLQISMDPKM RANAFAAFGA LSKYATGGQR EGFVEQIHST LPRLVVHLHD DDPSIRQACR VTLKQFAPLM DIQNDSTLFD SRAFGSDHRN
1501: DYENFVRELS RHLVHESERV DTYMASTIQA FDAPWPVIQA NAIHFSTTML SLSEDQHMFS HYYPQVFETL VNKMTRSQDS VVRAACSSAF GLLLRSTKST
1601: LWRGARLDRT DSGRKSNDPE SAKK
0101: DVHRPIFANA FKCWSQAVWL YITDLTSDSP LDSDVMSFLN SVFELLLRVW TTSRDHKVRV STVEALGQMV GLITRTQLKS ALPRLIPAIL ELYKKDHDDA
0201: LLATCSLYNL LNASLLSESG PPLLEFEDLT IVLSTLLPVI SINSENKRHS GSSVGRKAYN EVQRCFLTVG LVYPEDLFTF LLNKCKLKED HLTFGALCVL
0301: KHLLPRLLEA WHSKRPLLIE AARSLLDEQS LAVRKALSEL IVVMASHCYL VGPSGELFVE YLVRHSAIGE IDNLKAKGEP ISPTQLRAVC GKGLLLLTVT
0401: IPEMEYILWP FLLKMIVPKV YTGAVATVCR CISELCRRRS STTPMLIECK ARADIPSPEE LFTRLVVLLH NPLAKEQLAT QILTVLNYLS PLFPKNISMF
0501: WQDEIPKMKA YVFDTEDLKL DPSYQENWDD MIINFLAESL DVTHDADWVI SLGNAFAKQY NLYTPDDDHA ALLHRCMGIL LQKVNDRAYV RDKIDWMYEQ
0601: ADISIPANRL GLAKAMGLVA ASHLDTVLEK LKVILDNVGQ SIFQRILSLF SESYKTEDSD DIHAALALMY GYAAKYAPSS VIEARIDALV GTNMLSRLLH
0701: VRQQTAKQAV ITAIDLLGRA VINASESGAT FPLKRRDMML DYVLTLMGRD ENEGFAESSL ELLHTQALAL NACTTLVSVE PKLTVETRNR VMKATLGFFA
0801: LPNDPSDVIG PLIDNLVSLL CAILLTSGED GRSRAEQLLH LLRQLDQYVS SPVDYQRKRG CMAVHEMLLK FRKLCVAGYC ALGCSGDCPH RKYVDRSMQG
0901: NFSTLPSVFL FPDREVLCLG DRVITYLPRC ADTNSEVRKI SAQILDQFFS ISLSLPKAAL SSGLDSEKSY KALSSLEDVI AILKSDASID PSEVFNRIVS
1001: SICALLTVDE LVAALHSCTP AICDKIRQSA EGAIQAVTEF VSRRGSQLND NDISRTTQSL LSAAVHITEK SLRVEAIGAI SALAENTQSS IVFSEVLATA
1101: GKDIVTKDIT RMRGGWPMQD AFYAFSQHTE LSVSFMEHLI SVLNRSSLVK ADSHKDSHKG DNTSSSSETH VEDELLQAAI FALTAFFRGG GKTGKKAVEK
1201: SYSSVVGALT LQLGSCHGLA SAGQQDPLRV LLTSFQAFCE CVGDLEMGKI LARSGEQREK EKWVDLIGDI AGCISIKRPK EVQHICIILT KALNRPQRFQ
1301: REAAAAALSE FIRYSGDFSS VMEEMVEALC RHVSDDSPTV RRLCLRGLVQ MPSACMNHYT TQVIGVILAL LDDLDESVQL TAVSCLLMVT ESASNDAVEP
1401: ILLNLSVRLR NLQISMDPKM RANAFAAFGA LSKYATGGQR EGFVEQIHST LPRLVVHLHD DDPSIRQACR VTLKQFAPLM DIQNDSTLFD SRAFGSDHRN
1501: DYENFVRELS RHLVHESERV DTYMASTIQA FDAPWPVIQA NAIHFSTTML SLSEDQHMFS HYYPQVFETL VNKMTRSQDS VVRAACSSAF GLLLRSTKST
1601: LWRGARLDRT DSGRKSNDPE SAKK
0001: MASSSLGSSI PAPEAVQLLV SSLADDSSVV REASMASLRD IASLNPLLVL DCCYAVSRGG RRRFGNMAGV FQVMAFSVGA LEKGESDSVF MGKLAKIATA
0101: EIISSKELNA DWQRQASGLL VSIGTHFPDL MMEEIFLHLS GPATAAPAMV QILADFASSD ALQFTPRLKG VLSKVSPILG NVRDIHRPIF ANAFKCWSQA
0201: VWLYITDLTS DSPLDSDVMS FLNSVFELLL RVWAVSRDHK VRVSTVDALG QMVGLITRTQ LKSALPRLIP AILELYKKDH DDALLATCSL HNLLNASLLS
0301: ESGPPLLDFE DLTIVLSTLL PVIGINNERK RFSDISVGRK TYNEVQRCFL TVGLVYPEDL FTFLLNKCKL KEDPLTFGAL CILKHLLPRL FEAWHSKRPL
0401: LVDTASSLLD EQSLAVRKAL SELIVVMASH CYLVGPSGEL FVEYLVRHSA IGESDHLKAK GELVSPTQLR AVCGKGLLLL TVTIPEMEYI LWPFLLKMII
0501: PKVYTGAVAS VCRCITELCR RRSSTTPMLI ECKARADIPN PEELFTRLVV LLHNPLAKEQ LASQILTVLG YLSPLFPKNI SMFWQDEIPK MKAYVYDTED
0601: LKLDPTYQET WDDMIINFLA ESLDVTQDAD WVISLGNSFA KQYILYAPDD DHAALLHRCI GILLQKVNDR AYVRDKIDWM YEQADISIPA NRLGLAKAMG
0701: LVAASHLDTV LEKLKIIVDN VGQSIFQRIL SLFSESYKTE DSDDIHAALA LMYGYAAKYA PSSVIEARID ALVGTNMLSR LLHVRQQTAK QAVITAIDLL
0801: GRAVINAAET GATFPLKRRD QMLDYILTLM GRDENEGFAE SSLEVLHTQA LALNACTTLV SVEPKLTIET RNRVMKATLG FFALPNDPSD VISPLIDNLV
0901: TLLCAILLTS GEDGRSRAEQ LLHLLRQLDQ YVSSPIDYQR KRGCVAVHEM LLKFRKLCVG GYCALGCSGD CPHRKYADRS MQGNFSNLPS VFLFPDREVL
1001: CLGDRVITYL PRCADTNSEV RKISAQILDQ FFSISLSLPK AVLTSGLDSE DSYKALSSLE DVIAILKSDA SIDPSEVFNR IVSSICSLLT EHELVAALHS
1101: CTAAICDKIR QSAEGAIQAV TEFVSRRGSQ LSDNDISRTT HSLLSAAVHI TDKNLRVEAI GAISALAENT QSSIVFNEVL ATAGKDIVTK DITRMRGGWP
1201: MQDAFYAFSQ HTELSVLFME HLISILNRSS LVKSDSHKGE NTSSSSETHV EDDILQAAIF ALTAFFRGGG KIGKKAVEKS YSSVVGALTL QLGSCHGLAS
1301: SGQQDPLRVL LTSFQAFCEC VGDLEMGKIL ARNGEQIEKE KWVGLIGDIA GCISIKRPKE VRHICMILTK ALNRPQRFQR EAAAAALSEF IRYSGDFSSV
1401: MEEMVEALCR HVSDDSPTVR RLCLRGLVQM PSACMSHYTT QVIGVILALL DDLDESVQLT AVSCLLMVTE SASNDAVEPI LLNLSVRLRN LQVSMDPKMR
1501: ANAFSALGAL SKYATGGQRE GFVEQIHSTL PRLVVHLHDD DPSIRQACRV TLKRFAPLVD IINYSTLYDS RAFGSEDRTD YENFVRDLSK HLVQESERVD
1601: TYMASTIQAF DAPWPVIQAN AIHFSTTMLS LSEDQHIISL YYPQVFETLV SKMTRSQDSV VRAACSSAFG LLLRSSKSTL WRGARLDGTD SGRKANDLES
1701: VKK
0101: EIISSKELNA DWQRQASGLL VSIGTHFPDL MMEEIFLHLS GPATAAPAMV QILADFASSD ALQFTPRLKG VLSKVSPILG NVRDIHRPIF ANAFKCWSQA
0201: VWLYITDLTS DSPLDSDVMS FLNSVFELLL RVWAVSRDHK VRVSTVDALG QMVGLITRTQ LKSALPRLIP AILELYKKDH DDALLATCSL HNLLNASLLS
0301: ESGPPLLDFE DLTIVLSTLL PVIGINNERK RFSDISVGRK TYNEVQRCFL TVGLVYPEDL FTFLLNKCKL KEDPLTFGAL CILKHLLPRL FEAWHSKRPL
0401: LVDTASSLLD EQSLAVRKAL SELIVVMASH CYLVGPSGEL FVEYLVRHSA IGESDHLKAK GELVSPTQLR AVCGKGLLLL TVTIPEMEYI LWPFLLKMII
0501: PKVYTGAVAS VCRCITELCR RRSSTTPMLI ECKARADIPN PEELFTRLVV LLHNPLAKEQ LASQILTVLG YLSPLFPKNI SMFWQDEIPK MKAYVYDTED
0601: LKLDPTYQET WDDMIINFLA ESLDVTQDAD WVISLGNSFA KQYILYAPDD DHAALLHRCI GILLQKVNDR AYVRDKIDWM YEQADISIPA NRLGLAKAMG
0701: LVAASHLDTV LEKLKIIVDN VGQSIFQRIL SLFSESYKTE DSDDIHAALA LMYGYAAKYA PSSVIEARID ALVGTNMLSR LLHVRQQTAK QAVITAIDLL
0801: GRAVINAAET GATFPLKRRD QMLDYILTLM GRDENEGFAE SSLEVLHTQA LALNACTTLV SVEPKLTIET RNRVMKATLG FFALPNDPSD VISPLIDNLV
0901: TLLCAILLTS GEDGRSRAEQ LLHLLRQLDQ YVSSPIDYQR KRGCVAVHEM LLKFRKLCVG GYCALGCSGD CPHRKYADRS MQGNFSNLPS VFLFPDREVL
1001: CLGDRVITYL PRCADTNSEV RKISAQILDQ FFSISLSLPK AVLTSGLDSE DSYKALSSLE DVIAILKSDA SIDPSEVFNR IVSSICSLLT EHELVAALHS
1101: CTAAICDKIR QSAEGAIQAV TEFVSRRGSQ LSDNDISRTT HSLLSAAVHI TDKNLRVEAI GAISALAENT QSSIVFNEVL ATAGKDIVTK DITRMRGGWP
1201: MQDAFYAFSQ HTELSVLFME HLISILNRSS LVKSDSHKGE NTSSSSETHV EDDILQAAIF ALTAFFRGGG KIGKKAVEKS YSSVVGALTL QLGSCHGLAS
1301: SGQQDPLRVL LTSFQAFCEC VGDLEMGKIL ARNGEQIEKE KWVGLIGDIA GCISIKRPKE VRHICMILTK ALNRPQRFQR EAAAAALSEF IRYSGDFSSV
1401: MEEMVEALCR HVSDDSPTVR RLCLRGLVQM PSACMSHYTT QVIGVILALL DDLDESVQLT AVSCLLMVTE SASNDAVEPI LLNLSVRLRN LQVSMDPKMR
1501: ANAFSALGAL SKYATGGQRE GFVEQIHSTL PRLVVHLHDD DPSIRQACRV TLKRFAPLVD IINYSTLYDS RAFGSEDRTD YENFVRDLSK HLVQESERVD
1601: TYMASTIQAF DAPWPVIQAN AIHFSTTMLS LSEDQHIISL YYPQVFETLV SKMTRSQDSV VRAACSSAFG LLLRSSKSTL WRGARLDGTD SGRKANDLES
1701: VKK
Arabidopsis Description
SGR6Protein SHOOT GRAVITROPISM 6 [Source:UniProtKB/Swiss-Prot;Acc:F4IP13]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.