Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P01300_001 | Banana | plastid | 35.88 | 14.7 |
| Zm00001d027665_P004 | Maize | plasma membrane | 62.35 | 11.87 |
| Bra017223.1-P | Field mustard | cytosol | 36.76 | 9.36 |
| CDY63988 | Canola | cytosol | 36.76 | 7.7 |
| KRH67779 | Soybean | extracellular | 1.76 | 7.59 |
| AT2G36810.1 | Thale cress | cytosol | 37.94 | 7.52 |
| Solyc09g008490.2.1 | Tomato | extracellular | 35.0 | 6.87 |
| KRG96062 | Soybean | plasma membrane | 34.12 | 6.78 |
| CDY67451 | Canola | cytosol, peroxisome | 24.41 | 6.75 |
| VIT_08s0007g04630.t01 | Wine grape | nucleus, plastid | 36.47 | 6.45 |
| CDY57715 | Canola | plasma membrane | 4.71 | 4.75 |
| GSMUA_Achr1P01290_001 | Banana | peroxisome | 0.59 | 0.21 |
| HORVU3Hr1G069360.1 | Barley | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d048436_P001 | EnsemblPlants:Zm00001d048436_T001 | EnsemblPlantsGene:Zm00001d048436 | PANTHER:PTHR23120 | PANTHER:PTHR23120:SF0 | ProteinID:AQL09721.1 |
| UniParc:UPI00084319F4 | UniProt:A0A1D6PKE2 | MapMan:35.1 | : | : | : |
Description
Protein SHOOT GRAVITROPISM 6
Coordinates
chr9:-:156317542..156321056
Molecular Weight (calculated)
38000.0 Da
IEP (calculated)
6.501
GRAVY (calculated)
-0.034
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MIMPSSSFHL NLKQISCLAE NTNHVVVFDE VLSVAGKDIC TKDIPRIRGG WAIQDVFYAF SQHKELALLF LEYTLSILHK EPVIINSSEK GESTSESLAD
101: DCILQATMFA LNAFMRYWSP FDGSLLMLRM VGTFSSSDFT YFKKTSKLYR GGGKIGKQAV EKSYPSVLSG LILKLGSLNG VAELGRNELL RSLLIAFQSF
201: CKCVGDVEMG KLLARDGEQT EKDKWIELVQ EIACSSSVKR PKDVCSRLLE FCQLALSCVM LSTETRDGEN SCGVQKAFEA MVLYSEQAEQ AGSSEATGQE
301: AHHGRMNEEE KFVAWNGCIL LERLLSKTRV MHHCYCIFLR
101: DCILQATMFA LNAFMRYWSP FDGSLLMLRM VGTFSSSDFT YFKKTSKLYR GGGKIGKQAV EKSYPSVLSG LILKLGSLNG VAELGRNELL RSLLIAFQSF
201: CKCVGDVEMG KLLARDGEQT EKDKWIELVQ EIACSSSVKR PKDVCSRLLE FCQLALSCVM LSTETRDGEN SCGVQKAFEA MVLYSEQAEQ AGSSEATGQE
301: AHHGRMNEEE KFVAWNGCIL LERLLSKTRV MHHCYCIFLR
0001: MASSSLGSSI PAPEAVQLLV SSLADDSSVV REASMASLRD IASLNPLLVL DCCYAVSRGG RRRFGNMAGV FQVMAFSVGA LEKGESDSVF MGKLAKIATA
0101: EIISSKELNA DWQRQASGLL VSIGTHFPDL MMEEIFLHLS GPATAAPAMV QILADFASSD ALQFTPRLKG VLSKVSPILG NVRDIHRPIF ANAFKCWSQA
0201: VWLYITDLTS DSPLDSDVMS FLNSVFELLL RVWAVSRDHK VRVSTVDALG QMVGLITRTQ LKSALPRLIP AILELYKKDH DDALLATCSL HNLLNASLLS
0301: ESGPPLLDFE DLTIVLSTLL PVIGINNERK RFSDISVGRK TYNEVQRCFL TVGLVYPEDL FTFLLNKCKL KEDPLTFGAL CILKHLLPRL FEAWHSKRPL
0401: LVDTASSLLD EQSLAVRKAL SELIVVMASH CYLVGPSGEL FVEYLVRHSA IGESDHLKAK GELVSPTQLR AVCGKGLLLL TVTIPEMELS DFNAKEYMKL
0501: QYILWPFLLK MIIPKVYTGA VASVCRCITE LCRRRSSTTP MLIECKARAD IPNPEELFTR LVVLLHNPLA KEQLASQILT VLGYLSPLFP KNISMFWQDE
0601: IPKMKAYVYD TEDLKLDPTY QETWDDMIIN FLAESLDVTQ DADWVISLGN SFAKQYILYA PDDDHAALLH RCIGILLQKV NDRAYVRDKI DWMYEQADIS
0701: IPANRLGLAK AMGLVAASHL DTVLEKLKII VDNVGQSIFQ RILSLFSESY KTEDSDDIHA ALALMYGYAA KYAPSSVIEA RIDALVGTNM LSRLLHVRQQ
0801: TAKQAVITAI DLLGRAVINA AETGATFPLK RRDQMLDYIL TLMGRDENEG FAESSLEVLH TQALALNACT TLVSVEPKLT IETRNRVMKA TLGFFALPND
0901: PSDVISPLID NLVTLLCAIL LTSGEDGRSR AEQLLHLLRQ LDQYVSSPID YQRKRGCVAV HEMLLKFRKL CVGGYCALGC SGDCPHRKYA DRSMQGNFSN
1001: LPSVFLFPDR EVLCLGDRVI TYLPRCADTN SEVRKISAQI LDQFFSISLS LPKAVLTSGL DSEDSYKALS SLEDVIAILK SDASIDPSEV FNRIVSSICS
1101: LLTEHELVAA LHSCTAAICD KIRQSAEGAI QAVTEFVSRR GSQLSDNDIS RTTHSLLSAA VHITDKNLRV EAIGAISALA ENTQSSIVFN EVLATAGKDI
1201: VTKDITRMRG GWPMQDAFYA FSQHTELSVL FMEHLISILN RSSLVKSDSH KGENTSSSSE THVEDDILQA AIFALTAFFR GGGKIGKKAV EKSYSSVVGA
1301: LTLQLGSCHG LASSGQQDPL RVLLTSFQAF CECVGDLEMG KILARNGEQI EKEKWVGLIG DIAGCISIKR PKEVRHICMI LTKALNRPQR FQREAAAAAL
1401: SEFIRYSGDF SSVMEEMVEA LCRHVSDDSP TVRRLCLRGL VQMPSACMSH YTTQVIGVIL ALLDDLDESV QLTAVSCLLM VTESASNDAV EPILLNLSVR
1501: LRNLQVSMDP KMRANAFSAL GALSKYATGG QREGFVEQIH STLPRLVVHL HDDDPSIRQA CRVTLKRFAP LVDIINYSTL YDSRAFGSED RTDYENFVRD
1601: LSKHLVQESE RVDTYMASTI QAFDAPWPVI QANAIHFSTT MLSLSEDQHI ISLYYPQVFE TLVSKMTRSQ DSVVRAACSS AFGLLLRSSK STLWRGARLD
1701: GTDSGRKAND LESVKK
0101: EIISSKELNA DWQRQASGLL VSIGTHFPDL MMEEIFLHLS GPATAAPAMV QILADFASSD ALQFTPRLKG VLSKVSPILG NVRDIHRPIF ANAFKCWSQA
0201: VWLYITDLTS DSPLDSDVMS FLNSVFELLL RVWAVSRDHK VRVSTVDALG QMVGLITRTQ LKSALPRLIP AILELYKKDH DDALLATCSL HNLLNASLLS
0301: ESGPPLLDFE DLTIVLSTLL PVIGINNERK RFSDISVGRK TYNEVQRCFL TVGLVYPEDL FTFLLNKCKL KEDPLTFGAL CILKHLLPRL FEAWHSKRPL
0401: LVDTASSLLD EQSLAVRKAL SELIVVMASH CYLVGPSGEL FVEYLVRHSA IGESDHLKAK GELVSPTQLR AVCGKGLLLL TVTIPEMELS DFNAKEYMKL
0501: QYILWPFLLK MIIPKVYTGA VASVCRCITE LCRRRSSTTP MLIECKARAD IPNPEELFTR LVVLLHNPLA KEQLASQILT VLGYLSPLFP KNISMFWQDE
0601: IPKMKAYVYD TEDLKLDPTY QETWDDMIIN FLAESLDVTQ DADWVISLGN SFAKQYILYA PDDDHAALLH RCIGILLQKV NDRAYVRDKI DWMYEQADIS
0701: IPANRLGLAK AMGLVAASHL DTVLEKLKII VDNVGQSIFQ RILSLFSESY KTEDSDDIHA ALALMYGYAA KYAPSSVIEA RIDALVGTNM LSRLLHVRQQ
0801: TAKQAVITAI DLLGRAVINA AETGATFPLK RRDQMLDYIL TLMGRDENEG FAESSLEVLH TQALALNACT TLVSVEPKLT IETRNRVMKA TLGFFALPND
0901: PSDVISPLID NLVTLLCAIL LTSGEDGRSR AEQLLHLLRQ LDQYVSSPID YQRKRGCVAV HEMLLKFRKL CVGGYCALGC SGDCPHRKYA DRSMQGNFSN
1001: LPSVFLFPDR EVLCLGDRVI TYLPRCADTN SEVRKISAQI LDQFFSISLS LPKAVLTSGL DSEDSYKALS SLEDVIAILK SDASIDPSEV FNRIVSSICS
1101: LLTEHELVAA LHSCTAAICD KIRQSAEGAI QAVTEFVSRR GSQLSDNDIS RTTHSLLSAA VHITDKNLRV EAIGAISALA ENTQSSIVFN EVLATAGKDI
1201: VTKDITRMRG GWPMQDAFYA FSQHTELSVL FMEHLISILN RSSLVKSDSH KGENTSSSSE THVEDDILQA AIFALTAFFR GGGKIGKKAV EKSYSSVVGA
1301: LTLQLGSCHG LASSGQQDPL RVLLTSFQAF CECVGDLEMG KILARNGEQI EKEKWVGLIG DIAGCISIKR PKEVRHICMI LTKALNRPQR FQREAAAAAL
1401: SEFIRYSGDF SSVMEEMVEA LCRHVSDDSP TVRRLCLRGL VQMPSACMSH YTTQVIGVIL ALLDDLDESV QLTAVSCLLM VTESASNDAV EPILLNLSVR
1501: LRNLQVSMDP KMRANAFSAL GALSKYATGG QREGFVEQIH STLPRLVVHL HDDDPSIRQA CRVTLKRFAP LVDIINYSTL YDSRAFGSED RTDYENFVRD
1601: LSKHLVQESE RVDTYMASTI QAFDAPWPVI QANAIHFSTT MLSLSEDQHI ISLYYPQVFE TLVSKMTRSQ DSVVRAACSS AFGLLLRSSK STLWRGARLD
1701: GTDSGRKAND LESVKK
Arabidopsis Description
SGR6Protein SHOOT GRAVITROPISM 6 [Source:UniProtKB/Swiss-Prot;Acc:F4IP13]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.