Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH67779 | Soybean | extracellular | 22.73 | 18.99 |
| TraesCS4B01G311700.1 | Wheat | cytosol, plastid | 62.12 | 2.36 |
| TraesCS4D01G309500.1 | Wheat | cytosol, plastid | 60.61 | 2.3 |
| TraesCS4A01G411600.1 | Wheat | plasma membrane | 60.61 | 2.3 |
| KXG40179 | Sorghum | plasma membrane | 56.06 | 2.13 |
| HORVU4Hr1G079420.8 | Barley | plastid | 57.58 | 2.08 |
| GSMUA_Achr1P01300_001 | Banana | plastid | 25.76 | 2.05 |
| Zm00001d027665_P004 | Maize | plasma membrane | 54.55 | 2.02 |
| Solyc09g008490.2.1 | Tomato | extracellular | 33.33 | 1.27 |
| Bra017223.1-P | Field mustard | cytosol | 24.24 | 1.2 |
| KRG96062 | Soybean | plasma membrane | 28.79 | 1.11 |
| CDY63988 | Canola | cytosol | 24.24 | 0.99 |
| VIT_08s0007g04630.t01 | Wine grape | nucleus, plastid | 27.27 | 0.94 |
| AT2G36810.1 | Thale cress | cytosol | 24.24 | 0.93 |
| CDY57715 | Canola | plasma membrane | 3.03 | 0.59 |
| GSMUA_Achr1P01290_001 | Banana | peroxisome | 0.0 | 0.0 |
| CDY67451 | Canola | cytosol, peroxisome | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os03t0146600-01 | EnsemblPlantsGene:Os03g0146600 | ProteinID:BAF10874.1 | ProteinID:BAS82283.1 | UniParc:UPI0000E11F18 | UniProt:Q0DV64 |
| MapMan:35.2 | : | : | : | : | : |
Description
Similar to HEAT repeat family protein, expressed. (Os03t0146600-01)
Coordinates
chr3:+:2605032..2605475
Molecular Weight (calculated)
7273.4 Da
IEP (calculated)
7.551
GRAVY (calculated)
-0.936
Length
66 amino acids
Sequence
(BLAST)
(BLAST)
1: DAVVRAASSS ALGLLIKRSN VVKTLTPKFD RADSSQNFQH GDTRTKTSSE PQQETIDMPN DTQREP
0001: MSFLNSVFEL LLRVWAVSRD HKVRVSTVDA LGQMVGLITR TQLKSALPRL IPAILELYKK DHDDALLATC SLHNLLNASL LSESGPPLLD FEDLTIVLST
0101: LLPVIGINNE RKRFSDISVG RKTYNEVQRC FLTVGLVYPE DLFTFLLNKC KLKEDPLTFG ALCILKHLLP RLFEAWHSKR PLLVDTASSL LDEQSLAVRK
0201: ALSELIVVMA SHCYLVGPSG ELFVEYLVRH SAIGESDHLK AKGELVSPTQ LRAVCGKGLL LLTVTIPEME YILWPFLLKM IIPKVYTGAV ASVCRCITEL
0301: CRRRSSTTPM LIECKARADI PNPEELFTRL VVLLHNPLAK EQLASQILTV LGYLSPLFPK NISMFWQDEI PKMKAYVYDT EDLKLDPTYQ ETWDDMIINF
0401: LAESLDVTQD ADWVISLGNS FAKQYILYAP DDDHAALLHR CIGILLQKVN DRAYVRDKID WMYEQADISI PANRLGLAKA MGLVAASHLD TVLEKLKIIV
0501: DNVGQSIFQR ILSLFSESYK TEDSDDIHAA LALMYGYAAK YAPSSVIEAR IDALVGTNML SRLLHVRQQT AKQAVITAID LLGRAVINAA ETGATFPLKR
0601: RDQMLDYILT LMGRDENEGF AESSLEVLHT QALALNACTT LVSVEPKLTI ETRNRVMKAT LGFFALPNDP SDVISPLIDN LVTLLCAILL TSGEDGRSRA
0701: EQLLHLLRQL DQYVSSPIDY QRKRGCVAVH EMLLKFRKLC VGGYCALGCS GDCPHRKYAD RSMQGNFSNL PSVFLFPDRE VLCLGDRVIT YLPRCADTNS
0801: EVRKISAQIL DQFFSISLSL PKAVLTSGLD SEDSYKALSS LEDVIAILKS DASIDPSEVF NRIVSSICSL LTEHELVAAL HSCTAAICDK IRQSAEGAIQ
0901: AVTEFVSRRG SQLSDNDISR TTHSLLSAAV HITDKNLRVE AIGAISALAE NTQSSIVFNE VLATAGKDIV TKDITRMRGG WPMQDAFYAF SQHTELSVLF
1001: MEHLISILNR SSLVKSDSHK GENTSSSSET HVEDDILQAA IFALTAFFRG GGKIGKKAVE KSYSSVVGAL TLQLGSCHGL ASSGQQDPLR VLLTSFQAFC
1101: ECVGDLEMGK ILARNGEQIE KEKWVGLIGD IAGCISIKRP KEVRHICMIL TKALNRPQRF QREAAAAALS EFIRYSGDFS SVMEEMVEAL CRHVSDDSPT
1201: VRRLCLRGLV QMPSACMSHY TTQVIGVILA LLDDLDESVQ LTAVSCLLMV TESASNDAVE PILLNLSVRL RNLQVSMDPK MRANAFSALG ALSKYATGGQ
1301: REGFVEQIHS TLPRLVVHLH DDDPSIRQAC RVTLKRFAPL VDIINYSTLY DSRAFGSEDR TDYENFVRDL SKHLVQESER VDTYMASTIQ AFDAPWPVIQ
1401: ANAIHFSTTM LSLSEDQHII SLYYPQVFET LVSKMTRSQD SVVRAACSSA FGLLLRSSKS TLWRGARLDG TDSGRKANDL ESVKK
0101: LLPVIGINNE RKRFSDISVG RKTYNEVQRC FLTVGLVYPE DLFTFLLNKC KLKEDPLTFG ALCILKHLLP RLFEAWHSKR PLLVDTASSL LDEQSLAVRK
0201: ALSELIVVMA SHCYLVGPSG ELFVEYLVRH SAIGESDHLK AKGELVSPTQ LRAVCGKGLL LLTVTIPEME YILWPFLLKM IIPKVYTGAV ASVCRCITEL
0301: CRRRSSTTPM LIECKARADI PNPEELFTRL VVLLHNPLAK EQLASQILTV LGYLSPLFPK NISMFWQDEI PKMKAYVYDT EDLKLDPTYQ ETWDDMIINF
0401: LAESLDVTQD ADWVISLGNS FAKQYILYAP DDDHAALLHR CIGILLQKVN DRAYVRDKID WMYEQADISI PANRLGLAKA MGLVAASHLD TVLEKLKIIV
0501: DNVGQSIFQR ILSLFSESYK TEDSDDIHAA LALMYGYAAK YAPSSVIEAR IDALVGTNML SRLLHVRQQT AKQAVITAID LLGRAVINAA ETGATFPLKR
0601: RDQMLDYILT LMGRDENEGF AESSLEVLHT QALALNACTT LVSVEPKLTI ETRNRVMKAT LGFFALPNDP SDVISPLIDN LVTLLCAILL TSGEDGRSRA
0701: EQLLHLLRQL DQYVSSPIDY QRKRGCVAVH EMLLKFRKLC VGGYCALGCS GDCPHRKYAD RSMQGNFSNL PSVFLFPDRE VLCLGDRVIT YLPRCADTNS
0801: EVRKISAQIL DQFFSISLSL PKAVLTSGLD SEDSYKALSS LEDVIAILKS DASIDPSEVF NRIVSSICSL LTEHELVAAL HSCTAAICDK IRQSAEGAIQ
0901: AVTEFVSRRG SQLSDNDISR TTHSLLSAAV HITDKNLRVE AIGAISALAE NTQSSIVFNE VLATAGKDIV TKDITRMRGG WPMQDAFYAF SQHTELSVLF
1001: MEHLISILNR SSLVKSDSHK GENTSSSSET HVEDDILQAA IFALTAFFRG GGKIGKKAVE KSYSSVVGAL TLQLGSCHGL ASSGQQDPLR VLLTSFQAFC
1101: ECVGDLEMGK ILARNGEQIE KEKWVGLIGD IAGCISIKRP KEVRHICMIL TKALNRPQRF QREAAAAALS EFIRYSGDFS SVMEEMVEAL CRHVSDDSPT
1201: VRRLCLRGLV QMPSACMSHY TTQVIGVILA LLDDLDESVQ LTAVSCLLMV TESASNDAVE PILLNLSVRL RNLQVSMDPK MRANAFSALG ALSKYATGGQ
1301: REGFVEQIHS TLPRLVVHLH DDDPSIRQAC RVTLKRFAPL VDIINYSTLY DSRAFGSEDR TDYENFVRDL SKHLVQESER VDTYMASTIQ AFDAPWPVIQ
1401: ANAIHFSTTM LSLSEDQHII SLYYPQVFET LVSKMTRSQD SVVRAACSSA FGLLLRSSKS TLWRGARLDG TDSGRKANDL ESVKK
Arabidopsis Description
SGR6Protein SHOOT GRAVITROPISM 6 [Source:UniProtKB/Swiss-Prot;Acc:F4IP13]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.