Factsheet for HORVU1Hr1G003530.7

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G024700.1	Wheat	mitochondrion	73.06	80.8
TraesCS1D01G024800.1	Wheat	mitochondrion	73.42	79.92
TraesCS1B01G031100.1	Wheat	mitochondrion	72.88	79.33
Zm00001d035698_P001	Maize	mitochondrion	64.74	71.89
OQU77211	Sorghum	plastid	63.11	71.22
GSMUA_Achr6P06680_001	Banana	mitochondrion	47.74	62.41
KRH56525	Soybean	plastid	51.36	58.56
VIT_14s0066g00320.t01	Wine grape	plastid	51.36	54.62
CDY09856	Canola	plastid	49.73	54.03
Bra008756.1-P	Field mustard	plastid	49.01	51.92
AT5G14460.1	Thale cress	plastid	49.55	50.74
Solyc02g093460.2.1	Tomato	plastid	48.82	50.09
PGSC0003DMT400032834	Potato	plastid	48.28	49.26
CDX69580	Canola	plastid	39.6	48.03
HORVU2Hr1G027370.1	Barley	cytosol	7.59	6.54
HORVU2Hr1G027400.5	Barley	plastid	7.59	6.15

Protein Annotations

MapMan:16.6.3.2	Gene3D:3.30.2350.10	UniProt:A0A287EHN8	GO:GO:0001522	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139	GO:GO:0006396	GO:GO:0008150
GO:GO:0008152	GO:GO:0009451	GO:GO:0009982	GO:GO:0009987	EnsemblPlantsGene:HORVU1Hr1G003530	EnsemblPlants:HORVU1Hr1G003530.7
HAMAP:MF_01080	PFAM:PF01509	PFAM:PF16198	PANTHER:PTHR13767	InterPro:PsdUridine_synth_N	InterPro:PsdUridine_synth_cat_dom_sf
SUPFAM:SSF55120	TIGRFAMs:TIGR00431	InterPro:TruB_C	UniParc:UPI000B471F8B	SEG:seg	InterPro:tRNA_psdUridine_synth_TruB

Description

No Description!

Coordinates

chrchr1H:-:7843378..7856406

Molecular Weight (calculated)

61520.1 Da

IEP (calculated)

9.828

GRAVY (calculated)

-0.639

Length

553 amino acids

Sequence
(BLAST)

001: QHGLAKTTSW SSRSLESLTA SRRPSGPSIR DRTVEPRKKP SAITPSRSRT RDGEMLRSGR PAVATAAALL LSPAPRFRFL SLTATPYPLY YDLLVHRPVK
101: TPRSAPSDAA AGPPPPDAEG AGENHPALDR AQRKYLRKRR SRQLPDPDAT TGTKPTATSE MVELRPEVVD FPRLHAREEA LYFHDAFAMP WEKDKHYRML
201: YRLEKKYFPE QSLDNAFVAA DAPPQPSDAD KGLVFFEEEE EGKDGVEVGR KAGAADKGEV LERKVEEFFR ALKKGPGEGK ADDASTSAKK KTVVGGAARP
301: VKRDAERGGE EDWPRPHLAS TRTELPPRWD GPTGTVVLID KPKGWTSFTV CGKLRRLVKV QKVGHAGTLD PMATGLLIVC VGKATKVVDK YQGMVKGYSG
401: VFRLGEATST WDADSPVIQR ESWEHIKDED IRKAAASFMG EIWQVPPMFS AIKVGGEKMY DKARRGESIE LAPRRISIYK FDIERSLEDR QNLIFRVTCS
501: KGTYIRSLCA DLGKALRSCA HLTALRRDSI GDYSVNDAWN FDELQEQITK GYL

Best Arabidopsis Sequence Match ( AT5G14460.1 )
(BLAST)

001: MAKSLHFTRL MSSSARMSMT SPLFFSSVKP WRNIHKPYLA SLFLSTTSTR YPLQYDMIIN RPTQSSLSQN RRRPPKAIES GAPDSAEPEF DSWVDNKLAM
101: EREQGRPGSG DPEMDKAKRK YYSKRRKRLY GSDSEDENSS RKSDEGFVEL KPEVVEFDRL HQREEELYFY DTFAYPWEKD KHYKMVYQLE KKYYPDQCLD
201: KAFLQPGEVL KKSDDSGKVR GKKKVVAALG GKRSEVKRIG MENCDEDDDK LVFFDEVKEK EEKKKSEDDV VVVTEKKVEQ FFKGLTKSPN EKGMASGGGD
301: GEPFLVTRNG ELPPRWDGPN GTVLLVNKPK GWTSFTVCGK LRRLVKVKKV GHAGTLDPMA TGLLIVCVGK ATKVVDRYQG MIKGYSGVFR LGEATSTLDA
401: DSPVIQRESW EHIKDDDIKK ALTSFLGEIW QVPPMFSAIK VGGEKMYEKA RRGETVELSP RRISIFQFDI ERSLDDRQNL IFRVICSKGT YIRSLCADLA
501: KALGSCAHLT ALRRDSIGEY SANDAWEFNE LEAAITKNYF

Arabidopsis Description

Pseudouridine synthase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WVR7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.