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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
MultiLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os05t0183300-00 Rice plasma membrane 50.85 93.72
TraesCS5B01G411600.1 Wheat plastid 86.08 56.42
TraesCS5D01G416600.1 Wheat plasma membrane 86.65 55.76
Zm00001d036346_P001 Maize plasma membrane 75.28 54.53
TraesCS5A01G406600.1 Wheat plasma membrane 86.93 54.16
Os05t0183200-00 Rice nucleus 14.77 52.0
Zm00001d014874_P001 Maize plasma membrane 75.85 51.84
OQU77171 Sorghum cytosol, golgi, plasma membrane 75.0 51.26
GSMUA_Achr1P02860_001 Banana plasma membrane 45.17 41.84
KRH60889 Soybean plasma membrane 54.55 36.64
KRH51571 Soybean plasma membrane 54.26 36.24
GSMUA_Achr11P... Banana endoplasmic reticulum, golgi, plasma membrane 41.48 35.7
VIT_18s0122g00910.t01 Wine grape plasma membrane 52.84 35.23
AT1G42560.1 Thale cress plasma membrane 46.02 35.22
Solyc08g067760.2.1 Tomato plasma membrane 52.84 34.96
PGSC0003DMT400059600 Potato plasma membrane 53.98 34.55
PGSC0003DMT400083841 Potato plasma membrane 51.99 34.4
Solyc02g082430.2.1 Tomato plasma membrane 53.41 34.0
PGSC0003DMT400035548 Potato plasma membrane 53.12 33.88
AT2G33670.1 Thale cress cytoskeleton, golgi, plasma membrane 48.01 33.73
CDY23718 Canola plasma membrane 42.05 33.64
CDY37702 Canola plasma membrane 41.76 33.41
Bra021867.1-P Field mustard plasma membrane 41.76 33.41
GSMUA_Achr11P... Banana plasma membrane 52.84 33.33
VIT_07s0031g02240.t01 Wine grape golgi, nucleus, plasma membrane 52.56 32.86
KRH07806 Soybean plasma membrane 53.69 32.81
KRH39404 Soybean plasma membrane 53.69 32.76
AT5G65970.1 Thale cress plasma membrane 50.85 31.46
AT2G17430.1 Thale cress golgi 48.3 31.37
HORVU2Hr1G068660.2 Barley cytosol 25.28 31.12
CDY30365 Canola plasma membrane 47.44 30.93
CDY26808 Canola golgi, plasma membrane 47.16 30.74
HORVU1Hr1G052110.8 Barley golgi, nucleus, plasma membrane 49.15 30.73
Bra037272.1-P Field mustard golgi, plasma membrane 46.88 30.67
KRH76519 Soybean golgi 51.14 30.1
AT2G17480.1 Thale cress plasma membrane 48.86 29.01
CDY30363 Canola plasma membrane 48.58 28.89
Bra037270.1-P Field mustard plasma membrane 48.58 28.89
KRH28943 Soybean plasma membrane 49.15 28.83
HORVU4Hr1G082710.2 Barley plasma membrane 43.47 28.71
CDY26810 Canola plasma membrane 48.58 28.45
Bra002063.1-P Field mustard plasma membrane 48.01 28.4
CDY24339 Canola plasma membrane 47.73 28.24
CDY20802 Canola plasma membrane 47.73 28.24
HORVU4Hr1G082760.3 Barley plasma membrane 42.61 27.57
HORVU3Hr1G090450.3 Barley plasma membrane 33.24 24.22
HORVU1Hr1G064440.6 Barley plastid 34.38 23.31
HORVU2Hr1G013760.3 Barley golgi, plasma membrane 30.11 21.03
KRH72065 Soybean plasma membrane 17.9 20.93
HORVU0Hr1G008830.6 Barley nucleus 28.69 20.12
HORVU6Hr1G076080.1 Barley golgi, peroxisome 24.43 19.72
HORVU4Hr1G018270.3 Barley endoplasmic reticulum 28.69 19.65
HORVU6Hr1G033290.7 Barley plasma membrane 26.42 18.02
HORVU7Hr1G002390.14 Barley plasma membrane 21.59 17.92
HORVU2Hr1G118780.6 Barley nucleus, plasma membrane, vacuole 29.83 17.24
HORVU7Hr1G091040.14 Barley plasma membrane 26.7 16.46
Protein Annotations
EnsemblPlants:HORVU5Hr1G098670.1EnsemblPlantsGene:HORVU5Hr1G098670GO:GO:0005575GO:GO:0006950GO:GO:0006952GO:GO:0008150
GO:GO:0016020GO:GO:0016021InterPro:Mloncoils:CoilPANTHER:PTHR31942PANTHER:PTHR31942:SF25
PFAM:PF03094SEG:segTMHMM:TMhelixUniParc:UPI000B480104UniProt:A0A287SGJ8MapMan:35.1
Description
No Description!
Coordinates
chrchr5H:+:608528936..608532693
Molecular Weight (calculated)
37908.6 Da
IEP (calculated)
9.278
GRAVY (calculated)
-0.108
Length
352 amino acids
Sequence
(BLAST)
001: MSPTAPPPWR SAEPRYEDGK SXXXXXXXXX XXXXXKEWEK EAAGQDDEQS NNDPSQFRFT HETSFVRQHM NVLNKTPASF YISNFFRQFF RSVRRADYCA
101: LRHSFVNVHL APGSKFDFQK YIKRSLEDDF KVIVGISPIL WASALTFLLI NINGMHTMLW ISIMPLVIIL LVGTKLQGII CRMAIDITER HAVIQGIPLV
201: QVSDSYFWFS RPTFVLFLIH FTLFQNGFQI IYFLWILYEY GMDSCFNDSK KLVAARLCLG AVVQVLCSYV TLPLYALVSQ MGSTMKQSIF DDQTSKALKS
301: WRAGVKKKPA ANSKHGSGSP SGSPHSGSPK GDEGGGSTGI ALTQKHGDDG AP
Best Arabidopsis Sequence Match ( AT1G42560.1 )
(BLAST)
001: MAGGGGGGGG EGPRQLDQTP TWAVSTVCGV IILISIILEL IIHKVGEVFE RKKKKALFEA LEKIKNELMV LGFISLLLTF GQNYIASICV PSRYGHAMSF
101: CGPYDGPSED DRKKLKKTDH AMRILYSVQR RSLADAPPVN CKKDYVALIS LNALHQVHIF IFFLAVFHVI YSAITMMLGR AKIRGWKVWE QEVIHEQEMM
201: NDPSRFRLTH ETSFVREHVN SWASNKFFFY VMCFFRQILR SVRKSDYLTM RHGFISVHLA PGMKFDFQKY IKRSLEDDFK VVVGIRPELW AFVMLFLLFD
301: VHGWYVTAVI TMIPPLLTLA IGTKLQAIIS YMALEIQERH AVIQGMPVVN VSDQHFWFEK PDLVLHMIHF VLFQNAFEIT YFFWIWYEFG LRSCFHHHFG
401: LIIIRVCLGV GVQFLCSYIT LPLYALVTQM GSTMKRSVFD EQTSKALEQW HKKARKKNEK
Arabidopsis Description
MLO9MLO-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q94KB4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.