Factsheet for TraesCS5B01G411600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	golgi, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plastid: 22160430

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G416600.1	Wheat	plasma membrane	96.83	95.06
Os05t0183300-00	Rice	plasma membrane	33.52	94.24
TraesCS5A01G406600.1	Wheat	plasma membrane	97.02	92.21
HORVU5Hr1G098670.1	Barley	cytosol	56.42	86.08
Zm00001d036346_P001	Maize	plasma membrane	75.79	83.74
Zm00001d014874_P001	Maize	plasma membrane	75.98	79.22
OQU77171	Sorghum	cytosol, golgi, plasma membrane	75.42	78.64
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi, plasma membrane	47.86	62.84
AT1G42560.1	Thale cress	plasma membrane	48.79	56.96
CDY23718	Canola	plasma membrane	46.55	56.82
CDY37702	Canola	plasma membrane	46.37	56.59
Bra021867.1-P	Field mustard	plasma membrane	46.37	56.59
KRH51571	Soybean	plasma membrane	55.12	56.17
KRH60889	Soybean	plasma membrane	54.75	56.11
Solyc08g067760.2.1	Tomato	plasma membrane	55.31	55.83
VIT_18s0122g00910.t01	Wine grape	plasma membrane	53.82	54.73
PGSC0003DMT400083841	Potato	plasma membrane	54.0	54.51
AT2G33670.1	Thale cress	cytoskeleton, golgi, plasma membrane	50.28	53.89
GSMUA_Achr11P...	Banana	plasma membrane	55.12	53.05
PGSC0003DMT400059600	Potato	plasma membrane	53.45	52.18
PGSC0003DMT400035548	Potato	plasma membrane	53.45	51.99
Solyc02g082430.2.1	Tomato	plasma membrane	53.45	51.9
Os05t0183200-00	Rice	nucleus	9.5	51.0
VIT_07s0031g02240.t01	Wine grape	golgi, nucleus, plasma membrane	53.26	50.8
KRH72065	Soybean	plasma membrane	27.56	49.17
TraesCS1B01G216300.1	Wheat	plasma membrane	51.02	48.93
KRH39404	Soybean	plasma membrane	52.33	48.7
KRH07806	Soybean	plasma membrane	52.14	48.61
AT2G17430.1	Thale cress	golgi	47.11	46.68
KRH76519	Soybean	golgi	51.96	46.66
AT5G65970.1	Thale cress	plasma membrane	48.98	46.22
CDY30365	Canola	plasma membrane	46.0	45.74
Bra037272.1-P	Field mustard	golgi, plasma membrane	45.81	45.72
CDY26808	Canola	golgi, plasma membrane	45.44	45.19
KRH28943	Soybean	plasma membrane	50.47	45.17
AT2G17480.1	Thale cress	plasma membrane	48.98	44.35
CDY30363	Canola	plasma membrane	48.6	44.09
Bra037270.1-P	Field mustard	plasma membrane	48.6	44.09
GSMUA_Achr1P02860_001	Banana	plasma membrane	30.91	43.68
CDY26810	Canola	plasma membrane	48.6	43.43
TraesCS4B01G322100.1	Wheat	plastid	43.95	43.22
Bra002063.1-P	Field mustard	plasma membrane	47.67	43.03
CDY20802	Canola	plasma membrane	47.67	43.03
CDY24339	Canola	plasma membrane	47.49	42.86
TraesCS4B01G322700.1	Wheat	plasma membrane	43.95	41.92
TraesCS3B01G436500.2	Wheat	plasma membrane	36.31	38.46
TraesCS2B01G097900.1	Wheat	plasma membrane	34.45	37.99
TraesCS6B01G191900.1	Wheat	plasma membrane	34.45	37.3
TraesCS2B01G328700.1	Wheat	plasma membrane	33.33	36.53
TraesCS2B01G097800.1	Wheat	plasma membrane	33.33	36.38
TraesCS1B01G272200.2	Wheat	plasma membrane, plastid	34.45	36.13
TraesCS7B01G285600.1	Wheat	plasma membrane	33.71	35.77
TraesCS6B01G337000.1	Wheat	plasma membrane	32.4	34.87
TraesCS4B01G096900.1	Wheat	plasma membrane	29.42	30.8
TraesCS2B01G595100.1	Wheat	plasma membrane	30.54	26.8

Protein Annotations

EnsemblPlants:TraesCS5B01G411600.1	EnsemblPlantsGene:TraesCS5B01G411600	GO:GO:0005575	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	InterPro:Mlo	PANTHER:PTHR31942	PANTHER:PTHR31942:SF25	PFAM:PF03094
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5B:+:586727062..586731553

Molecular Weight (calculated)

59264.2 Da

IEP (calculated)

9.054

GRAVY (calculated)

0.109

Length

537 amino acids

Sequence
(BLAST)

001: MSGGGGGGNS RELDQTPTWA VASVCGVIVL ISILLEMGLH KVGEWFAHRK KKAMVEALEK VKAELMVLGF ISLLLVFGQS YIIKICISEA AADTMLPCRL
101: KKATVEVEIA KDGGHGAPAG GAKEDHGAKQ PEEHFSLGTH PFTATSFSVP NRMLSEATSF GVPHRMLSEA NMNTKCPPGK VSLISINALH QLHIFIFFLA
201: VFHVCYSATT MALGRAKIRG WKEWEKEAAG QDEEVTNDPS QFRFTHETSF VRQHMNVLNK TPASFYISNF FRQFFRSVRR ADYCALRHSF VNVHLAPGSK
301: FDFQKYIKRS LEDDFKVIVG ISPILWASAL IFLLVNINGM HTMLWISIMP LVIILSVGTK LQGIICRMAI DITERHAVIQ GIPLVQVSDS YFWFSRPTFV
401: LFLIHFTLFQ NGFQIIYFLW ILYEYGMDSC FNDSTKLVVA RLCLGAVVQV LCSYVTLPLY ALVSQMGSTM KQSIFDDQTS KALKSWRAGV KKKPAAHSKH
501: GGSPSGSPHA GSPKATDEGS TGVALTQKQG QGDDGAP

Best Arabidopsis Sequence Match ( AT2G33670.1 )
(BLAST)

001: MAGGGGGSTS GEGPRELDQT PTWAVSTVCG VIILISIVLE LMIHKIGEVF TERRKKALYE ALQKIKNELM VLGFISLLLT FGQNYIASLC VASRYGHAMS
101: FCGPYDGPSG ESKKPKTTEH LERRVLADAA PAQCKKGYVP LISLNALHQV HIFIFFLAVF HVIYSAITMM LGRAKIRGWK VWEEEVINDH EMMNDPSRFR
201: LTHETSFVRE HVNPWAKNRF SFYVMCFFRQ MLRSVRKSDY LTMRHGFISV HLAPGMKFNF QKYIKRSLED DFKVVVGISP ELWAFVMLFL LFDVHGWYVT
301: AVITMIPPLL TLAIGTKLQA IISDMALEIQ ERHAVIQGMP LVNVSDRHFW FSRPALVLHI IHFILFQNAF EITYFFWIWY EFGLRSCFHH HFALIIIRVA
401: LGVGVQFLCS YITLPLYALV TQMGSTMKRS VFDDQTSKAL KNWHKNAKKK SETPGQTQPP LPNLRPKTGG DIESASPANI TASVDVKESD QSQSRDLLSG
501: P

Arabidopsis Description

MLO5MLO-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:O22815]
SUBAcon: [plasma membrane,golgi,cytoskeleton]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.