Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G094200.1 | Wheat | unclear | 99.65 | 99.57 |
| TraesCS4D01G091000.1 | Wheat | golgi | 99.57 | 99.48 |
| HORVU4Hr1G019290.1 | Barley | cytosol | 76.5 | 98.33 |
| EES09396 | Sorghum | cytosol | 95.58 | 95.49 |
| Zm00001d004785_P001 | Maize | mitochondrion | 63.14 | 94.55 |
| Os11t0175900-01 | Rice | nucleus, plasma membrane | 63.49 | 94.21 |
| Os02t0793100-01 | Rice | plasma membrane | 93.84 | 93.76 |
| Zm00001d004784_P001 | Maize | cytosol | 30.88 | 93.19 |
| Zm00001d053028_P001 | Maize | mitochondrion | 85.6 | 85.38 |
| GSMUA_Achr10P... | Banana | cytosol | 75.37 | 77.52 |
| GSMUA_Achr6P17830_001 | Banana | cytosol | 75.2 | 77.41 |
| KRG94459 | Soybean | endoplasmic reticulum, nucleus | 72.16 | 71.66 |
| VIT_14s0171g00280.t01 | Wine grape | cytosol, nucleus, plastid | 72.68 | 71.08 |
| KRH06999 | Soybean | endoplasmic reticulum | 71.47 | 70.79 |
| Solyc11g068640.1.1 | Tomato | nucleus | 70.86 | 70.37 |
| CDY37153 | Canola | cytosol, endoplasmic reticulum, nucleus | 70.95 | 70.15 |
| CDX87673 | Canola | cytosol | 70.6 | 69.57 |
| AT3G01780.1 | Thale cress | cytosol | 70.6 | 69.22 |
| Bra022067.1-P | Field mustard | nucleus | 70.69 | 68.43 |
| CDX91928 | Canola | cytosol | 1.91 | 46.81 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:22.1.4.1 | InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006897 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0009504 | GO:GO:0009506 | GO:GO:0009524 | GO:GO:0009555 | GO:GO:0016020 | GO:GO:0042802 |
| InterPro:IPR011989 | PANTHER:PTHR36029 | SUPFAM:SSF48371 | InterPro:TPLATE | EnsemblPlantsGene:TraesCS4A01G222200 | EnsemblPlants:TraesCS4A01G222200.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:529619251..529626266
Molecular Weight (calculated)
126964.0 Da
IEP (calculated)
5.805
GRAVY (calculated)
-0.080
Length
1153 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDLLIAQITT DLRSSDALRQ SSALLQALQQ CAAGRDVSAL ARTAATEILA APSSAVCKRV ALDLLRALPL PPDLLDPLLL SSLRSDLSFP DPDVAASSIA
0101: SFPSLPSHLL PTLLSSAHAD IAAALSSPAE SLRLAAVTSL SSLLPRDDLA LMCSTNPSLM GHATTWWGRL TELALDSADA VAAAAFEALA RLFQELDARR
0201: MSRLAGDKLV DGEGALAVRA QWAADAINFI WSRRNMLIAR SMVMPVESFR VTVYPLVHAA KMVASGAVNT LRQIAKPGDT TIADTVEASA EKLVGVSDIV
0301: SHLLPFLSSL EPPLVFEVGI NMLSLADAPG GKPEWASAAI IAILTLWDRQ EFSSMRETIV RAVVANLHLL DLGMQVSLFK RLLQMLKNLR AESDRMHALA
0401: CICRTALCVD LFAKESVRRG QKPVPGTDVI SLFEDARVKD DLNSITSKSL FREELVASLV ESCFQLSLPL PEQKNSGTES RVIGALAYGT GYGALNWTEP
0501: ALDVVEVCRP CVLWDCDGRT YAIDCYLKLL VRLCHIYDTR GGVKTIKTGA SQDQILNETR LRNLQLQLIR DLREVHTSRI SSRLIWAISE HFDLEGLDPL
0601: LADDPEDPLN IIISNMHKTL FNTDSSATTS NRIQDVQAVL ICAQRLGTRN ARAGQLLSKE LEEFRSSTSA DSVTKHQSRY VLQIIKYVTN HPDNRWVGVG
0701: DATGDYPFSH HKLTVQFSEA AAAQDRKLEG LVHKAIQELW RPNPSQLTLL QTKGIGALHK DLPKARTLTG SSDPCYIEAY HLADPTDGRI TLHLKILNLT
0801: ELELNRVDIR VGLSGALYYM DGFSRTVRHL RNLVSQDPVQ SSVTVGVSHF ERCSLWVQVL YYPFYGSGGS ADYEGDYAEE DSQMTRQKRA LRPELGEPVV
0901: LRCQPYKIPL AELLLPYECS PVEYFRLWPG LPAMVECTGT YTYEGSGFKA TAAQQYDSSP FLSGLKSIYS KPFHQVCSHF IRTVAGFQLC YAAKTWFGGF
1001: VGMMIFGASE VSRNVDLGDE TTTMICKFVV RASDESITRE IESDLQGWLD DITDGAVEYM PEEEVKSTAA ERLKISMERI ALLKAAKPKM PPAKTEQEEE
1101: ERKQSEELDG FGNPKGPSTL SKLTAEEAEH RALQAAVLQE WHQLCKEKAM KAQ
0101: SFPSLPSHLL PTLLSSAHAD IAAALSSPAE SLRLAAVTSL SSLLPRDDLA LMCSTNPSLM GHATTWWGRL TELALDSADA VAAAAFEALA RLFQELDARR
0201: MSRLAGDKLV DGEGALAVRA QWAADAINFI WSRRNMLIAR SMVMPVESFR VTVYPLVHAA KMVASGAVNT LRQIAKPGDT TIADTVEASA EKLVGVSDIV
0301: SHLLPFLSSL EPPLVFEVGI NMLSLADAPG GKPEWASAAI IAILTLWDRQ EFSSMRETIV RAVVANLHLL DLGMQVSLFK RLLQMLKNLR AESDRMHALA
0401: CICRTALCVD LFAKESVRRG QKPVPGTDVI SLFEDARVKD DLNSITSKSL FREELVASLV ESCFQLSLPL PEQKNSGTES RVIGALAYGT GYGALNWTEP
0501: ALDVVEVCRP CVLWDCDGRT YAIDCYLKLL VRLCHIYDTR GGVKTIKTGA SQDQILNETR LRNLQLQLIR DLREVHTSRI SSRLIWAISE HFDLEGLDPL
0601: LADDPEDPLN IIISNMHKTL FNTDSSATTS NRIQDVQAVL ICAQRLGTRN ARAGQLLSKE LEEFRSSTSA DSVTKHQSRY VLQIIKYVTN HPDNRWVGVG
0701: DATGDYPFSH HKLTVQFSEA AAAQDRKLEG LVHKAIQELW RPNPSQLTLL QTKGIGALHK DLPKARTLTG SSDPCYIEAY HLADPTDGRI TLHLKILNLT
0801: ELELNRVDIR VGLSGALYYM DGFSRTVRHL RNLVSQDPVQ SSVTVGVSHF ERCSLWVQVL YYPFYGSGGS ADYEGDYAEE DSQMTRQKRA LRPELGEPVV
0901: LRCQPYKIPL AELLLPYECS PVEYFRLWPG LPAMVECTGT YTYEGSGFKA TAAQQYDSSP FLSGLKSIYS KPFHQVCSHF IRTVAGFQLC YAAKTWFGGF
1001: VGMMIFGASE VSRNVDLGDE TTTMICKFVV RASDESITRE IESDLQGWLD DITDGAVEYM PEEEVKSTAA ERLKISMERI ALLKAAKPKM PPAKTEQEEE
1101: ERKQSEELDG FGNPKGPSTL SKLTAEEAEH RALQAAVLQE WHQLCKEKAM KAQ
0001: MDILFAQIQA DLRSNDALRQ SSALLQALQQ SAAGRDISVI AKSAVEEIVA SPASAVCKKL AFDLIRSTRL TPDLWDTVCS GVKTDLHFPD PDVTAAAVSI
0101: LAALPAFSLP KLISDCSSEI ASCFDSPSDN LRFSITETLG CILARDDLVT LCENNVGLLD KVSNWWARIG QNMLDKSDAV SKVAFESVGR LFQEFDSKRM
0201: SRLAGDKLVD SENSLAIRSK WVSSMVDIVW RKRSALMARS LVLPVETFRA TVFPLVFAVK AVASGSVEVI RQLSKASSAA AAANATVVDS NAEKLVGVSD
0301: LVTHLAPFLA SSLDPALIFE VGINMLYLAD VAGGKPEWAS QSIIAILTLW DRQEFSSARE SIVRAVVTNL HLLDLHMQVS LFRRLLLMVR NLRAESDRMH
0401: ALACICRTAL CVHLFARESA RRGQKPLPGT DIISLFEDAR IKDDLNSVTS KSLFREELVA MLVESCFQLS LPLPEQKNSG MESRVIGALA YGTGYGALNW
0501: TEPALEVVEV CRPCVKWDCD GRTYAVDCYL KLLVRLCHIY DTRGGVKRLK DGASQDQILN ETRLQNLQRE LVKDLQEVNT PRILGRLIWT IAEHIDLEGL
0601: DPLLADDPDD PLNIIIANIH KVLFNLDAAA TTSNRLQDVQ AVLLCAQRMG SRHARAGQLL TKELEEYRNH AAADTVSKHQ TRLILQRIKY VSNLPERKWA
0701: GVSETRGDYP FSHHKLTVQF YEPSAAQDRK LEGLIHKAIL ELWRPKPTEL TLFLTKGVDS TSIKVPPTAY PLTGSSDPCY IEAYHLADTN DGRVTLHLKI
0801: INLTELELNR VDIRVGLSGA LYFMDGSPQA VRQLRNLVSQ DPVQCSVTVG VSQFERCGFW VQVLYYPFRG ARGEYDGDYI EEDPQIMKQK RGSKAELGEP
0901: VILRCQPYKI PLTELLLPHK ISPVEFFRLW PSLPAVAEYT GTYMYEGSGF MATAAQQYGA SPFLSGLKSL SSKPFHRVCS HIIRTVAGFQ LCYAAKTWHG
1001: GFVGMMIFGA SEVSRNMDLG DETTTMMCKF VVRASEASIT KQIESDIQGW CDDLTDGGVE YMPEDEVKAT AAEKLKISME RIALLKAAQP KKTSKIEEES
1101: ENEEEEEGEE EDDDEEVKEK KEKEEGKDKE EKKKKEKEKG TFSKLTAEET EHMALQAAVL QEWHILCKDR KYTKVN
0101: LAALPAFSLP KLISDCSSEI ASCFDSPSDN LRFSITETLG CILARDDLVT LCENNVGLLD KVSNWWARIG QNMLDKSDAV SKVAFESVGR LFQEFDSKRM
0201: SRLAGDKLVD SENSLAIRSK WVSSMVDIVW RKRSALMARS LVLPVETFRA TVFPLVFAVK AVASGSVEVI RQLSKASSAA AAANATVVDS NAEKLVGVSD
0301: LVTHLAPFLA SSLDPALIFE VGINMLYLAD VAGGKPEWAS QSIIAILTLW DRQEFSSARE SIVRAVVTNL HLLDLHMQVS LFRRLLLMVR NLRAESDRMH
0401: ALACICRTAL CVHLFARESA RRGQKPLPGT DIISLFEDAR IKDDLNSVTS KSLFREELVA MLVESCFQLS LPLPEQKNSG MESRVIGALA YGTGYGALNW
0501: TEPALEVVEV CRPCVKWDCD GRTYAVDCYL KLLVRLCHIY DTRGGVKRLK DGASQDQILN ETRLQNLQRE LVKDLQEVNT PRILGRLIWT IAEHIDLEGL
0601: DPLLADDPDD PLNIIIANIH KVLFNLDAAA TTSNRLQDVQ AVLLCAQRMG SRHARAGQLL TKELEEYRNH AAADTVSKHQ TRLILQRIKY VSNLPERKWA
0701: GVSETRGDYP FSHHKLTVQF YEPSAAQDRK LEGLIHKAIL ELWRPKPTEL TLFLTKGVDS TSIKVPPTAY PLTGSSDPCY IEAYHLADTN DGRVTLHLKI
0801: INLTELELNR VDIRVGLSGA LYFMDGSPQA VRQLRNLVSQ DPVQCSVTVG VSQFERCGFW VQVLYYPFRG ARGEYDGDYI EEDPQIMKQK RGSKAELGEP
0901: VILRCQPYKI PLTELLLPHK ISPVEFFRLW PSLPAVAEYT GTYMYEGSGF MATAAQQYGA SPFLSGLKSL SSKPFHRVCS HIIRTVAGFQ LCYAAKTWHG
1001: GFVGMMIFGA SEVSRNMDLG DETTTMMCKF VVRASEASIT KQIESDIQGW CDDLTDGGVE YMPEDEVKAT AAEKLKISME RIALLKAAQP KKTSKIEEES
1101: ENEEEEEGEE EDDDEEVKEK KEKEEGKDKE EKKKKEKEKG TFSKLTAEET EHMALQAAVL QEWHILCKDR KYTKVN
Arabidopsis Description
TPLATEProtein TPLATE [Source:UniProtKB/Swiss-Prot;Acc:F4J8D3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.